RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 MAFO75444 373 aaPredicted RBP4.83□□□□□ -1.64
HMGB3P20-201ENST00000417997 BCAR1P56945 870 aa4.83□□□□□ -1.64
HMGB3P20-201ENST00000417997 DGCR2P98153 550 aa4.83□□□□□ -1.64
HMGB3P20-201ENST00000417997 ADCY2Q08462 1091 aa4.83□□□□□ -1.64
HMGB3P20-201ENST00000417997 ADCY1Q08828 1119 aa4.83□□□□□ -1.64
HMGB3P20-201ENST00000417997 CRHR2Q13324 411 aa4.83□□□□□ -1.64
HMGB3P20-201ENST00000417997 MYBPC3Q14896 1274 aa4.83□□□□□ -1.64
HMGB3P20-201ENST00000417997 ESRP1Q6NXG1 681 aaKnown RBP4.83□□□□□ -1.64
HMGB3P20-201ENST00000417997 C16orf86Q6ZW13 317 aa4.83□□□□□ -1.64
HMGB3P20-201ENST00000417997 DHX37Q8IY37 1157 aaKnown RBP4.83□□□□□ -1.64
HMGB3P20-201ENST00000417997 NXPE1Q8N323 547 aa4.83□□□□□ -1.64
HMGB3P20-201ENST00000417997 SYNPOQ8N3V7 929 aa4.83□□□□□ -1.64
HMGB3P20-201ENST00000417997 TCP11L2Q8N4U5 519 aa4.83□□□□□ -1.64
HMGB3P20-201ENST00000417997 APPBP2Q92624 585 aa4.83□□□□□ -1.64
HMGB3P20-201ENST00000417997 RABGGTAQ92696 567 aa4.83□□□□□ -1.64
HMGB3P20-201ENST00000417997 LPPQ93052 612 aa4.83□□□□□ -1.64
HMGB3P20-201ENST00000417997 PLEKHG4BQ96PX9 1271 aa4.83□□□□□ -1.64
HMGB3P20-201ENST00000417997 ORAI2Q96SN7 254 aa4.83□□□□□ -1.64
HMGB3P20-201ENST00000417997 MYL10Q9BUA6 226 aa4.83□□□□□ -1.64
HMGB3P20-201ENST00000417997 SLC6A15Q9H2J7 730 aa4.83□□□□□ -1.64
HMGB3P20-201ENST00000417997 POLR3BQ9NW08 1133 aaPredicted RBP4.83□□□□□ -1.64
HMGB3P20-201ENST00000417997 THG1LQ9NWX6 298 aaKnown RBP4.83□□□□□ -1.64
HMGB3P20-201ENST00000417997 NCDNQ9UBB6 729 aa4.83□□□□□ -1.64
HMGB3P20-201ENST00000417997 SYNPO2Q9UMS6 1093 aa4.83□□□□□ -1.64
HMGB3P20-201ENST00000417997 RRP7AQ9Y3A4 280 aaKnown RBP4.83□□□□□ -1.64
HMGB3P20-201ENST00000417997 SPO11Q9Y5K1 396 aa4.83□□□□□ -1.64
HMGB3P20-201ENST00000417997 LRRC37A3O60309 1634 aa4.83□□□□□ -1.64
HMGB3P20-201ENST00000417997 PXDNQ92626 1479 aa4.82□□□□□ -1.64
HMGB3P20-201ENST00000417997 MAP3K19Q56UN5 1328 aa4.82□□□□□ -1.64
HMGB3P20-201ENST00000417997 C2orf78A6NCI8 922 aa4.82□□□□□ -1.64
HMGB3P20-201ENST00000417997 ZNF891A8MT65 544 aaPredicted RBP4.82□□□□□ -1.64
HMGB3P20-201ENST00000417997 DAPK3O43293 454 aa4.82□□□□□ -1.64
HMGB3P20-201ENST00000417997 PRPF6O94906 941 aaKnown RBP4.82□□□□□ -1.64
HMGB3P20-201ENST00000417997 ZNF202O95125 648 aa4.82□□□□□ -1.64
HMGB3P20-201ENST00000417997 HMOX1P09601 288 aa4.82□□□□□ -1.64
HMGB3P20-201ENST00000417997 HNRNPLP14866 589 aaKnown RBP eCLIP4.82□□□□□ -1.64
HMGB3P20-201ENST00000417997 ATP2A2P16615 1042 aaKnown RBP4.82□□□□□ -1.64
HMGB3P20-201ENST00000417997 ACRV1P26436 265 aa4.82□□□□□ -1.64
HMGB3P20-201ENST00000417997 PRKAR2BP31323 418 aa4.82□□□□□ -1.64
HMGB3P20-201ENST00000417997 ADCY7P51828 1080 aa4.82□□□□□ -1.64
HMGB3P20-201ENST00000417997 HMGA2P52926 109 aa4.82□□□□□ -1.64
HMGB3P20-201ENST00000417997 IRX6P78412 446 aaPredicted RBP4.82□□□□□ -1.64
HMGB3P20-201ENST00000417997 PTH1RQ03431 593 aa4.82□□□□□ -1.64
HMGB3P20-201ENST00000417997 LMOD3Q0VAK6 560 aa4.82□□□□□ -1.64
HMGB3P20-201ENST00000417997 SART3Q15020 963 aaKnown RBP4.82□□□□□ -1.64
HMGB3P20-201ENST00000417997 TKFCQ3LXA3 575 aa4.82□□□□□ -1.64
HMGB3P20-201ENST00000417997 GAREM2Q75VX8 874 aa4.82□□□□□ -1.64
HMGB3P20-201ENST00000417997 KRT28Q7Z3Y7 464 aa4.82□□□□□ -1.64
HMGB3P20-201ENST00000417997 ADGRE4PQ86SQ3 457 aa4.82□□□□□ -1.64
HMGB3P20-201ENST00000417997 LRRTM3Q86VH5 581 aa4.82□□□□□ -1.64
HMGB3P20-201ENST00000417997 PASD1Q8IV76 773 aa4.82□□□□□ -1.64
HMGB3P20-201ENST00000417997 KCNH5Q8NCM2 988 aa4.82□□□□□ -1.64
HMGB3P20-201ENST00000417997 SORCS2Q96PQ0 1159 aa4.82□□□□□ -1.64
HMGB3P20-201ENST00000417997 MRIQ9BWK5 157 aa4.82□□□□□ -1.64
HMGB3P20-201ENST00000417997 MTG2Q9H4K7 406 aa4.82□□□□□ -1.64
HMGB3P20-201ENST00000417997 INTS7Q9NVH2 962 aaKnown RBP4.82□□□□□ -1.64
HMGB3P20-201ENST00000417997 RCAN3Q9UKA8 241 aa4.82□□□□□ -1.64
HMGB3P20-201ENST00000417997 GIT1Q9Y2X7 761 aa4.82□□□□□ -1.64
HMGB3P20-201ENST00000417997 PHLPP1O60346 1717 aa4.82□□□□□ -1.64
HMGB3P20-201ENST00000417997 PARP4Q9UKK3 1724 aaKnown RBP4.82□□□□□ -1.64
HMGB3P20-201ENST00000417997 LMO7Q8WWI1 1683 aa4.82□□□□□ -1.64
HMGB3P20-201ENST00000417997 ZNF521Q96K83 1311 aa4.81□□□□□ -1.64
HMGB3P20-201ENST00000417997 UBE2QL1A1L167 161 aa4.81□□□□□ -1.64
HMGB3P20-201ENST00000417997 CYR61O00622 381 aa4.81□□□□□ -1.64
HMGB3P20-201ENST00000417997 MAFGO15525 162 aa4.81□□□□□ -1.64
HMGB3P20-201ENST00000417997 CDC45O75419 566 aa4.81□□□□□ -1.64
HMGB3P20-201ENST00000417997 TOX4O94842 621 aa4.81□□□□□ -1.64
HMGB3P20-201ENST00000417997 SLPIP03973 132 aa4.81□□□□□ -1.64
HMGB3P20-201ENST00000417997 C1SP09871 688 aa4.81□□□□□ -1.64
HMGB3P20-201ENST00000417997 EIF4A2Q14240 407 aaKnown RBP4.81□□□□□ -1.64
HMGB3P20-201ENST00000417997 LSM12Q3MHD2 195 aaKnown RBP4.81□□□□□ -1.64
HMGB3P20-201ENST00000417997 BMP8AQ7Z5Y6 402 aa4.81□□□□□ -1.64
HMGB3P20-201ENST00000417997 PHYKPLQ8IUZ5 450 aa4.81□□□□□ -1.64
HMGB3P20-201ENST00000417997 ZZZ3Q8IYH5 903 aa4.81□□□□□ -1.64
HMGB3P20-201ENST00000417997 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P20-201ENST00000417997 PLA2G15Q8NCC3 412 aa4.81□□□□□ -1.64
HMGB3P20-201ENST00000417997 CHTF18Q8WVB6 975 aa4.81□□□□□ -1.64
HMGB3P20-201ENST00000417997 GPR101Q96P66 508 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P20-201ENST00000417997 GPHA2Q96T91 129 aa4.81□□□□□ -1.64
HMGB3P20-201ENST00000417997 SH3BP1Q9Y3L3 701 aa4.81□□□□□ -1.64
HMGB3P20-201ENST00000417997 MRPL42Q9Y6G3 142 aaKnown RBP4.81□□□□□ -1.64
HMGB3P20-201ENST00000417997 AHDC1Q5TGY3 1603 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P20-201ENST00000417997 USP19O94966 1318 aa4.8□□□□□ -1.64
HMGB3P20-201ENST00000417997 PMS2P1A4D2B8 440 aa4.8□□□□□ -1.64
HMGB3P20-201ENST00000417997 PLSCR1O15162 318 aa4.8□□□□□ -1.64
HMGB3P20-201ENST00000417997 CYP27B1O15528 508 aa4.8□□□□□ -1.64
HMGB3P20-201ENST00000417997 PCDH8O95206 1070 aa4.8□□□□□ -1.64
HMGB3P20-201ENST00000417997 F2P00734 622 aa4.8□□□□□ -1.64
HMGB3P20-201ENST00000417997 CD40P25942 277 aa4.8□□□□□ -1.64
HMGB3P20-201ENST00000417997 CANXP27824 592 aaKnown RBP4.8□□□□□ -1.64
HMGB3P20-201ENST00000417997 HOXC9P31274 260 aa4.8□□□□□ -1.64
HMGB3P20-201ENST00000417997 ACVRL1P37023 503 aa4.8□□□□□ -1.64
HMGB3P20-201ENST00000417997 TMPOP42166 694 aaKnown RBP4.8□□□□□ -1.64
HMGB3P20-201ENST00000417997 KPNA1P52294 538 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P20-201ENST00000417997 RRP1P56182 461 aaKnown RBP4.8□□□□□ -1.64
HMGB3P20-201ENST00000417997 RIPK4P57078 832 aa4.8□□□□□ -1.64
HMGB3P20-201ENST00000417997 CALD1Q05682 793 aaKnown RBP4.8□□□□□ -1.64
HMGB3P20-201ENST00000417997 SLFN5Q08AF3 891 aa4.8□□□□□ -1.64
HMGB3P20-201ENST00000417997 KLF10Q13118 480 aa4.8□□□□□ -1.64
HMGB3P20-201ENST00000417997 HSP90AB2PQ58FF8 381 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms