RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 GATMP50440 423 aa8.8□□□□□ -1
MDC1-203ENST00000417033 MYL5Q02045 173 aa8.8□□□□□ -1
MDC1-203ENST00000417033 LRRC63Q05C16 580 aa8.8□□□□□ -1
MDC1-203ENST00000417033 EDRF1Q3B7T1 1238 aa8.8□□□□□ -1
MDC1-203ENST00000417033 SPATA1Q5VX52 437 aa8.8□□□□□ -1
MDC1-203ENST00000417033 CEP135Q66GS9 1140 aa8.8□□□□□ -1
MDC1-203ENST00000417033 SCARA3Q6AZY7 606 aa8.8□□□□□ -1
MDC1-203ENST00000417033 NOTUMQ6P988 496 aa8.8□□□□□ -1
MDC1-203ENST00000417033 SLC27A1Q6PCB7 646 aa8.8□□□□□ -1
MDC1-203ENST00000417033 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.8□□□□□ -1
MDC1-203ENST00000417033 TMCO2Q7Z6W1 182 aaPredicted RBP8.8□□□□□ -1
MDC1-203ENST00000417033 C12orf56Q8IXR9 622 aa8.8□□□□□ -1
MDC1-203ENST00000417033 CSGALNACT2Q8N6G5 542 aa8.8□□□□□ -1
MDC1-203ENST00000417033 RDH13Q8NBN7 331 aa8.8□□□□□ -1
MDC1-203ENST00000417033 ENOX1Q8TC92 643 aaKnown RBP8.8□□□□□ -1
MDC1-203ENST00000417033 FAM200AQ8TCP9 573 aa8.8□□□□□ -1
MDC1-203ENST00000417033 SEPT8Q92599 483 aa8.8□□□□□ -1
MDC1-203ENST00000417033 TSG101Q99816 390 aa8.8□□□□□ -1
MDC1-203ENST00000417033 FAM213AQ9BRX8 229 aa8.8□□□□□ -1
MDC1-203ENST00000417033 TCHPQ9BT92 498 aa8.8□□□□□ -1
MDC1-203ENST00000417033 SRRTQ9BXP5 876 aaKnown RBP8.8□□□□□ -1
MDC1-203ENST00000417033 GTPBP4Q9BZE4 634 aaKnown RBP8.8□□□□□ -1
MDC1-203ENST00000417033 TOPORSQ9NS56 1045 aaPredicted RBP8.8□□□□□ -1
MDC1-203ENST00000417033 FAM105AQ9NUU6 356 aa8.8□□□□□ -1
MDC1-203ENST00000417033 FANCLQ9NW38 375 aa8.8□□□□□ -1
MDC1-203ENST00000417033 SNTG2Q9NY99 539 aa8.8□□□□□ -1
MDC1-203ENST00000417033 DACH1Q9UI36 760 aa8.8□□□□□ -1
MDC1-203ENST00000417033 AGO2Q9UKV8 859 aaKnown RBP8.8□□□□□ -1
MDC1-203ENST00000417033 IPPQ9Y573 584 aa8.8□□□□□ -1
MDC1-203ENST00000417033 SQORQ9Y6N5 450 aa8.8□□□□□ -1
MDC1-203ENST00000417033 PTPRJQ12913 1337 aa8.8□□□□□ -1
MDC1-203ENST00000417033 BICDL2A1A5D9 508 aa8.79□□□□□ -1
MDC1-203ENST00000417033 C9IYK1 514 aa8.79□□□□□ -1
MDC1-203ENST00000417033 OGTO15294 1046 aa8.79□□□□□ -1
MDC1-203ENST00000417033 CLDN3O15551 220 aa8.79□□□□□ -1
MDC1-203ENST00000417033 EXOC3O60645 756 aa8.79□□□□□ -1
MDC1-203ENST00000417033 RECQL4O94761 1208 aa8.79□□□□□ -1
MDC1-203ENST00000417033 STAG3L1P0CL83 205 aa8.79□□□□□ -1
MDC1-203ENST00000417033 CXCL8P10145 99 aa8.79□□□□□ -1
MDC1-203ENST00000417033 MCF2P10911 925 aa8.79□□□□□ -1
MDC1-203ENST00000417033 SCP2P22307 547 aa8.79□□□□□ -1
MDC1-203ENST00000417033 AKAP5P24588 427 aa8.79□□□□□ -1
MDC1-203ENST00000417033 AXLP30530 894 aa8.79□□□□□ -1
MDC1-203ENST00000417033 MLLT3P42568 568 aaPredicted RBP8.79□□□□□ -1
MDC1-203ENST00000417033 AFF1P51825 1210 aaKnown RBP8.79□□□□□ -1
MDC1-203ENST00000417033 DEFB103AP81534 67 aa8.79□□□□□ -1
MDC1-203ENST00000417033 FPGSQ05932 587 aa8.79□□□□□ -1
MDC1-203ENST00000417033 SPAG1Q07617 926 aa8.79□□□□□ -1
MDC1-203ENST00000417033 ADAM9Q13443 819 aa8.79□□□□□ -1
MDC1-203ENST00000417033 ENOX2Q16206 610 aaKnown RBP8.79□□□□□ -1
MDC1-203ENST00000417033 NFIL3Q16649 462 aa8.79□□□□□ -1
MDC1-203ENST00000417033 LMBRD2Q68DH5 695 aaPredicted RBP8.79□□□□□ -1
MDC1-203ENST00000417033 CNKSR3Q6P9H4 555 aa8.79□□□□□ -1
MDC1-203ENST00000417033 ECHDC2Q86YB7 292 aa8.79□□□□□ -1
MDC1-203ENST00000417033 SLC9A9Q8IVB4 645 aa8.79□□□□□ -1
MDC1-203ENST00000417033 GPD1LQ8N335 351 aa8.79□□□□□ -1
MDC1-203ENST00000417033 TMEM199Q8N511 208 aa8.79□□□□□ -1
MDC1-203ENST00000417033 USP38Q8NB14 1042 aa8.79□□□□□ -1
MDC1-203ENST00000417033 XXYLT1Q8NBI6 393 aa8.79□□□□□ -1
MDC1-203ENST00000417033 RNF169Q8NCN4 708 aa8.79□□□□□ -1
MDC1-203ENST00000417033 CNOT6LQ96LI5 555 aaKnown RBP8.79□□□□□ -1
MDC1-203ENST00000417033 BPIFA3Q9BQP9 254 aa8.79□□□□□ -1
MDC1-203ENST00000417033 IL23AQ9NPF7 189 aa8.79□□□□□ -1
MDC1-203ENST00000417033 KLK14Q9P0G3 267 aa8.79□□□□□ -1
MDC1-203ENST00000417033 PRKAG2Q9UGJ0 569 aa8.79□□□□□ -1
MDC1-203ENST00000417033 CPSF3Q9UKF6 684 aaKnown RBP8.79□□□□□ -1
MDC1-203ENST00000417033 PCDHB2Q9Y5E7 798 aa8.79□□□□□ -1
MDC1-203ENST00000417033 ENPP3O14638 875 aa8.78□□□□□ -1
MDC1-203ENST00000417033 IKBKBO14920 756 aa8.78□□□□□ -1
MDC1-203ENST00000417033 CETN3O15182 167 aa8.78□□□□□ -1
MDC1-203ENST00000417033 AP5Z1O43299 807 aa8.78□□□□□ -1
MDC1-203ENST00000417033 EXTL3O43909 919 aa8.78□□□□□ -1
MDC1-203ENST00000417033 TRIM49P0CI25 452 aa8.78□□□□□ -1
MDC1-203ENST00000417033 TRIM49CP0CI26 452 aa8.78□□□□□ -1
MDC1-203ENST00000417033 FGFR1P11362 822 aa8.78□□□□□ -1
MDC1-203ENST00000417033 ZNF18P17022 549 aa8.78□□□□□ -1
MDC1-203ENST00000417033 ZSCAN20P17040 1043 aaPredicted RBP8.78□□□□□ -1
MDC1-203ENST00000417033 ABCD1P33897 745 aa8.78□□□□□ -1
MDC1-203ENST00000417033 RFC2P35250 354 aa8.78□□□□□ -1
MDC1-203ENST00000417033 GRM5P41594 1212 aa8.78□□□□□ -1
MDC1-203ENST00000417033 MAGEA10P43363 369 aaPredicted RBP8.78□□□□□ -1
MDC1-203ENST00000417033 GUCY2FP51841 1108 aa8.78□□□□□ -1
MDC1-203ENST00000417033 DLG4P78352 724 aa8.78□□□□□ -1
MDC1-203ENST00000417033 FKBP3Q00688 224 aaKnown RBP8.78□□□□□ -1
MDC1-203ENST00000417033 CYP24A1Q07973 514 aa8.78□□□□□ -1
MDC1-203ENST00000417033 PCBP1Q15365 356 aaKnown RBP eCLIP8.78□□□□□ -13e-6■■□□□ 13.4
MDC1-203ENST00000417033 TPD52L1Q16890 204 aaPredicted RBP8.78□□□□□ -1
MDC1-203ENST00000417033 SLC10A6Q3KNW5 377 aa8.78□□□□□ -1
MDC1-203ENST00000417033 DCAF4L1Q3SXM0 396 aa8.78□□□□□ -1
MDC1-203ENST00000417033 GLRA4Q5JXX5 417 aa8.78□□□□□ -1
MDC1-203ENST00000417033 TMEM240Q5SV17 173 aa8.78□□□□□ -1
MDC1-203ENST00000417033 C1orf220Q5T0J3 134 aa8.78□□□□□ -1
MDC1-203ENST00000417033 CDKAL1Q5VV42 579 aa8.78□□□□□ -1
MDC1-203ENST00000417033 SLFN12LQ6IEE8 588 aa8.78□□□□□ -1
MDC1-203ENST00000417033 AGMOQ6ZNB7 445 aa8.78□□□□□ -1
MDC1-203ENST00000417033 ZNF365Q70YC5 407 aa8.78□□□□□ -1
MDC1-203ENST00000417033 OTOP2Q7RTS6 562 aa8.78□□□□□ -1
MDC1-203ENST00000417033 ZNF598Q86UK7 904 aaKnown RBP8.78□□□□□ -1
MDC1-203ENST00000417033 BRSK2Q8IWQ3 736 aa8.78□□□□□ -1
MDC1-203ENST00000417033 EFCAB13Q8IY85 973 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms