RNA–Protein interactions for RNA: ENST00000416893.2

ATG4AP1-201, Transcript of autophagy related 4A cysteine peptidase pseudogene 1, humanhuman

BASIC

Gene ATG4AP1, Length 538 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AP1-201ENST00000416893 ZC3H12BQ5HYM0 836 aaKnown RBP5.8□□□□□ -1.48
ATG4AP1-201ENST00000416893 STEAP3Q658P3 488 aa5.8□□□□□ -1.48
ATG4AP1-201ENST00000416893 NSMFQ6X4W1 530 aa5.8□□□□□ -1.48
ATG4AP1-201ENST00000416893 USP53Q70EK8 1073 aa5.8□□□□□ -1.48
ATG4AP1-201ENST00000416893 KRT26Q7Z3Y9 468 aa5.8□□□□□ -1.48
ATG4AP1-201ENST00000416893 RPAP2Q8IXW5 612 aaPredicted RBP5.8□□□□□ -1.48
ATG4AP1-201ENST00000416893 THAP3Q8WTV1 239 aaPredicted RBP5.8□□□□□ -1.48
ATG4AP1-201ENST00000416893 TBC1D22AQ8WUA7 517 aa5.8□□□□□ -1.48
ATG4AP1-201ENST00000416893 DDX1Q92499 740 aaKnown RBP5.8□□□□□ -1.48
ATG4AP1-201ENST00000416893 ZBED3Q96IU2 234 aaPredicted RBP5.8□□□□□ -1.48
ATG4AP1-201ENST00000416893 GLIS2Q9BZE0 524 aaPredicted RBP5.8□□□□□ -1.48
ATG4AP1-201ENST00000416893 GNL3LQ9NVN8 582 aaKnown RBP5.8□□□□□ -1.48
ATG4AP1-201ENST00000416893 NTMQ9P121 344 aa5.8□□□□□ -1.48
ATG4AP1-201ENST00000416893 PGAP2Q9UHJ9 254 aa5.8□□□□□ -1.48
ATG4AP1-201ENST00000416893 HDAC9Q9UKV0 1011 aa5.8□□□□□ -1.48
ATG4AP1-201ENST00000416893 PCDHAC2Q9Y5I4 1007 aa5.8□□□□□ -1.48
ATG4AP1-201ENST00000416893 FPGT-TNNI3KV9GXZ4 949 aa5.8□□□□□ -1.48
ATG4AP1-201ENST00000416893 AOX1Q06278 1338 aa5.79□□□□□ -1.48
ATG4AP1-201ENST00000416893 ADM5C9JUS6 153 aa5.79□□□□□ -1.48
ATG4AP1-201ENST00000416893 WNT10BO00744 389 aa5.79□□□□□ -1.48
ATG4AP1-201ENST00000416893 PRODHO43272 600 aa5.79□□□□□ -1.48
ATG4AP1-201ENST00000416893 SMARCA5O60264 1052 aaPredicted RBP5.79□□□□□ -1.48
ATG4AP1-201ENST00000416893 IGSF3O75054 1194 aa5.79□□□□□ -1.48
ATG4AP1-201ENST00000416893 FAM153BP0C7A2 387 aa5.79□□□□□ -1.48
ATG4AP1-201ENST00000416893 MAGEA10P43363 369 aaPredicted RBP5.79□□□□□ -1.48
ATG4AP1-201ENST00000416893 SARSP49591 514 aaKnown RBP5.79□□□□□ -1.48
ATG4AP1-201ENST00000416893 SETQ01105 290 aaPredicted RBP5.79□□□□□ -1.48
ATG4AP1-201ENST00000416893 CFAP100Q494V2 611 aa5.79□□□□□ -1.48
ATG4AP1-201ENST00000416893 C2orf27AQ580R0 203 aa5.79□□□□□ -1.48
ATG4AP1-201ENST00000416893 FOXB2Q5VYV0 432 aa5.79□□□□□ -1.48
ATG4AP1-201ENST00000416893 CD300LDQ6UXZ3 194 aa5.79□□□□□ -1.48
ATG4AP1-201ENST00000416893 DLK2Q6UY11 383 aa5.79□□□□□ -1.48
ATG4AP1-201ENST00000416893 MTERF4Q7Z6M4 381 aaKnown RBP5.79□□□□□ -1.48
ATG4AP1-201ENST00000416893 SCUBE1Q8IWY4 988 aa5.79□□□□□ -1.48
ATG4AP1-201ENST00000416893 FAM126BQ8IXS8 530 aa5.79□□□□□ -1.48
ATG4AP1-201ENST00000416893 WDR66Q8TBY9 1149 aa5.79□□□□□ -1.48
ATG4AP1-201ENST00000416893 PHOSPHO1Q8TCT1 267 aa5.79□□□□□ -1.48
ATG4AP1-201ENST00000416893 DCAF4Q8WV16 495 aa5.79□□□□□ -1.48
ATG4AP1-201ENST00000416893 ZBTB8AQ96BR9 441 aa5.79□□□□□ -1.48
ATG4AP1-201ENST00000416893 TRIM44Q96DX7 344 aaPredicted RBP5.79□□□□□ -1.48
ATG4AP1-201ENST00000416893 NEUROD6Q96NK8 337 aa5.79□□□□□ -1.48
ATG4AP1-201ENST00000416893 ZFYVE21Q9BQ24 234 aa5.79□□□□□ -1.48
ATG4AP1-201ENST00000416893 PHF20Q9BVI0 1012 aa5.79□□□□□ -1.48
ATG4AP1-201ENST00000416893 GPR108Q9NPR9 543 aa5.79□□□□□ -1.48
ATG4AP1-201ENST00000416893 SPATA6Q9NWH7 488 aaPredicted RBP5.79□□□□□ -1.48
ATG4AP1-201ENST00000416893 FBXL7Q9UJT9 491 aa5.79□□□□□ -1.48
ATG4AP1-201ENST00000416893 DENND2AQ9ULE3 1009 aa5.79□□□□□ -1.48
ATG4AP1-201ENST00000416893 PCDHB4Q9Y5E5 795 aa5.79□□□□□ -1.48
ATG4AP1-201ENST00000416893 PDS5AQ29RF7 1337 aaKnown RBP5.78□□□□□ -1.48
ATG4AP1-201ENST00000416893 KRIT1O00522 736 aa5.78□□□□□ -1.48
ATG4AP1-201ENST00000416893 CELF2O95319 508 aaKnown RBP5.78□□□□□ -1.48
ATG4AP1-201ENST00000416893 C8BP07358 591 aa5.78□□□□□ -1.48
ATG4AP1-201ENST00000416893 PRDX5P30044 214 aa5.78□□□□□ -1.48
ATG4AP1-201ENST00000416893 NKX3-2P78367 333 aa5.78□□□□□ -1.48
ATG4AP1-201ENST00000416893 DLGAP5Q15398 846 aa5.78□□□□□ -1.48
ATG4AP1-201ENST00000416893 KIZQ2M2Z5 673 aa5.78□□□□□ -1.48
ATG4AP1-201ENST00000416893 HSP90AB4PQ58FF6 505 aa5.78□□□□□ -1.48
ATG4AP1-201ENST00000416893 EMC4Q5J8M3 183 aa5.78□□□□□ -1.48
ATG4AP1-201ENST00000416893 GORABQ5T7V8 394 aa5.78□□□□□ -1.48
ATG4AP1-201ENST00000416893 ZNF761Q86XN6 746 aaPredicted RBP5.78□□□□□ -1.48
ATG4AP1-201ENST00000416893 ERC1Q8IUD2 1116 aa5.78□□□□□ -1.48
ATG4AP1-201ENST00000416893 LINC00482Q8N8I6 264 aa5.78□□□□□ -1.48
ATG4AP1-201ENST00000416893 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.78□□□□□ -1.48
ATG4AP1-201ENST00000416893 DCPSQ96C86 337 aaKnown RBP5.78□□□□□ -1.48
ATG4AP1-201ENST00000416893 EAF2Q96CJ1 260 aaPredicted RBP5.78□□□□□ -1.48
ATG4AP1-201ENST00000416893 EXOC2Q96KP1 924 aa5.78□□□□□ -1.48
ATG4AP1-201ENST00000416893 IL1RAPL2Q9NP60 686 aa5.78□□□□□ -1.48
ATG4AP1-201ENST00000416893 DBNLQ9UJU6 430 aaKnown RBP5.78□□□□□ -1.48
ATG4AP1-201ENST00000416893 SCAF8Q9UPN6 1271 aaKnown RBP5.78□□□□□ -1.48
ATG4AP1-201ENST00000416893 MYH7P12883 1935 aa5.78□□□□□ -1.48
ATG4AP1-201ENST00000416893 MAST3O60307 1309 aa5.77□□□□□ -1.49
ATG4AP1-201ENST00000416893 SALL1Q9NSC2 1324 aa5.77□□□□□ -1.49
ATG4AP1-201ENST00000416893 CLRN2A0PK11 232 aa5.77□□□□□ -1.49
ATG4AP1-201ENST00000416893 ITGB3P05106 788 aa5.77□□□□□ -1.49
ATG4AP1-201ENST00000416893 UQCRFS1P1P0C7P4 283 aa5.77□□□□□ -1.49
ATG4AP1-201ENST00000416893 MCAMP43121 646 aa5.77□□□□□ -1.49
ATG4AP1-201ENST00000416893 RBM5P52756 815 aaKnown RBP eCLIP5.77□□□□□ -1.49
ATG4AP1-201ENST00000416893 NTRK3Q16288 839 aa5.77□□□□□ -1.49
ATG4AP1-201ENST00000416893 TTC39AQ5SRH9 613 aa5.77□□□□□ -1.49
ATG4AP1-201ENST00000416893 CST9Q5W186 159 aa5.77□□□□□ -1.49
ATG4AP1-201ENST00000416893 CYP4F22Q6NT55 531 aa5.77□□□□□ -1.49
ATG4AP1-201ENST00000416893 NOP9Q86U38 636 aaKnown RBP5.77□□□□□ -1.49
ATG4AP1-201ENST00000416893 AACSQ86V21 672 aa5.77□□□□□ -1.49
ATG4AP1-201ENST00000416893 APOBEC3FQ8IUX4 373 aaKnown RBP5.77□□□□□ -1.49
ATG4AP1-201ENST00000416893 TRIM48Q8IWZ4 208 aa5.77□□□□□ -1.49
ATG4AP1-201ENST00000416893 DNAJC5GQ8N7S2 189 aa5.77□□□□□ -1.49
ATG4AP1-201ENST00000416893 KISS1RQ969F8 398 aaPredicted RBP5.77□□□□□ -1.49
ATG4AP1-201ENST00000416893 TEKT1Q969V4 418 aa5.77□□□□□ -1.49
ATG4AP1-201ENST00000416893 KIF1BPQ96EK5 621 aa5.77□□□□□ -1.49
ATG4AP1-201ENST00000416893 CDC6Q99741 560 aa5.77□□□□□ -1.49
ATG4AP1-201ENST00000416893 DHRS4Q9BTZ2 278 aa5.77□□□□□ -1.49
ATG4AP1-201ENST00000416893 C11orf84Q9BUA3 381 aaPredicted RBP5.77□□□□□ -1.49
ATG4AP1-201ENST00000416893 CCDC8Q9H0W5 538 aaPredicted RBP5.77□□□□□ -1.49
ATG4AP1-201ENST00000416893 HMG20BQ9P0W2 317 aa5.77□□□□□ -1.49
ATG4AP1-201ENST00000416893 NUB1Q9Y5A7 615 aa5.77□□□□□ -1.49
ATG4AP1-201ENST00000416893 CNTNAP1P78357 1384 aa5.77□□□□□ -1.49
ATG4AP1-201ENST00000416893 DOCK2Q92608 1830 aa5.76□□□□□ -1.49
ATG4AP1-201ENST00000416893 MAST2Q6P0Q8 1798 aa5.76□□□□□ -1.49
ATG4AP1-201ENST00000416893 PAPPA2Q9BXP8 1791 aa5.76□□□□□ -1.49
ATG4AP1-201ENST00000416893 TRBV23-1A0A0A0MS06 115 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms