RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 KIAA0825Q8IV33 1275 aa15.71■□□□□ 0.11
NCKIPSD-204ENST00000416649 ZDHHC14Q8IZN3 488 aa15.71■□□□□ 0.11
NCKIPSD-204ENST00000416649 REXO1Q8N1G1 1221 aaKnown RBP15.71■□□□□ 0.11
NCKIPSD-204ENST00000416649 SERPINB12Q96P63 405 aa15.71■□□□□ 0.11
NCKIPSD-204ENST00000416649 ATP8A2Q9NTI2 1148 aa15.71■□□□□ 0.11
NCKIPSD-204ENST00000416649 ALG6Q9Y672 507 aa15.71■□□□□ 0.11
NCKIPSD-204ENST00000416649 FRMPD2Q68DX3 1309 aaPredicted RBP15.71■□□□□ 0.11
NCKIPSD-204ENST00000416649 TSPY3P0CV98 308 aa15.71■□□□□ 0.1
NCKIPSD-204ENST00000416649 TSPY8P0CW00 308 aa15.71■□□□□ 0.1
NCKIPSD-204ENST00000416649 T-ENOLP0DO92 83 aa15.71■□□□□ 0.1
NCKIPSD-204ENST00000416649 VCAM1P19320 739 aa15.71■□□□□ 0.1
NCKIPSD-204ENST00000416649 GALNT17Q6IS24 598 aa15.71■□□□□ 0.1
NCKIPSD-204ENST00000416649 EPM2AIP1Q7L775 607 aaPredicted RBP15.71■□□□□ 0.1
NCKIPSD-204ENST00000416649 CCDC65Q8IXS2 484 aa15.71■□□□□ 0.1
NCKIPSD-204ENST00000416649 NRG4Q8WWG1 115 aa15.71■□□□□ 0.1
NCKIPSD-204ENST00000416649 IL17RBQ9NRM6 502 aa15.71■□□□□ 0.1
NCKIPSD-204ENST00000416649 RHBDL2Q9NX52 303 aa15.71■□□□□ 0.1
NCKIPSD-204ENST00000416649 GALNT8Q9NY28 637 aa15.71■□□□□ 0.1
NCKIPSD-204ENST00000416649 PCDHB13Q9Y5F0 798 aa15.71■□□□□ 0.1
NCKIPSD-204ENST00000416649 COL24A1Q17RW2 1714 aa15.7■□□□□ 0.1
NCKIPSD-204ENST00000416649 RASA4BC9J798 803 aa15.7■□□□□ 0.1
NCKIPSD-204ENST00000416649 RASA4O43374 803 aa15.7■□□□□ 0.1
NCKIPSD-204ENST00000416649 GNA11P29992 359 aa15.7■□□□□ 0.1
NCKIPSD-204ENST00000416649 MESDQ14696 234 aa15.7■□□□□ 0.1
NCKIPSD-204ENST00000416649 ZRSR2Q15696 482 aaKnown RBP15.7■□□□□ 0.1
NCKIPSD-204ENST00000416649 SEL1L2Q5TEA6 688 aa15.7■□□□□ 0.1
NCKIPSD-204ENST00000416649 SCYL3Q8IZE3 742 aa15.7■□□□□ 0.1
NCKIPSD-204ENST00000416649 CERS5Q8N5B7 392 aa15.7■□□□□ 0.1
NCKIPSD-204ENST00000416649 DAGLBQ8NCG7 672 aa15.7■□□□□ 0.1
NCKIPSD-204ENST00000416649 INPP5DQ92835 1189 aa15.7■□□□□ 0.1
NCKIPSD-204ENST00000416649 IFT43Q96FT9 208 aa15.7■□□□□ 0.1
NCKIPSD-204ENST00000416649 RTFDC1Q9BY42 306 aaPredicted RBP15.7■□□□□ 0.1
NCKIPSD-204ENST00000416649 DMAP1Q9NPF5 467 aaPredicted RBP15.7■□□□□ 0.1
NCKIPSD-204ENST00000416649 RGS17Q9UGC6 210 aaPredicted RBP15.7■□□□□ 0.1
NCKIPSD-204ENST00000416649 USP20Q9Y2K6 914 aa15.7■□□□□ 0.1
NCKIPSD-204ENST00000416649 PASKQ96RG2 1323 aa15.7■□□□□ 0.1
NCKIPSD-204ENST00000416649 GSTTP1A0A1W2PQM5 241 aa15.7■□□□□ 0.1
NCKIPSD-204ENST00000416649 MAGEA13PA6NCF6 341 aa15.7■□□□□ 0.1
NCKIPSD-204ENST00000416649 TPP2P29144 1249 aaPredicted RBP15.7■□□□□ 0.1
NCKIPSD-204ENST00000416649 TNNI2P48788 182 aa15.7■□□□□ 0.1
NCKIPSD-204ENST00000416649 CCDC15Q0P6D6 951 aa15.7■□□□□ 0.1
NCKIPSD-204ENST00000416649 TCP10Q12799 353 aa15.7■□□□□ 0.1
NCKIPSD-204ENST00000416649 KPNB1Q14974 876 aaKnown RBP15.7■□□□□ 0.1
NCKIPSD-204ENST00000416649 LRRC74BQ6ZQY2 392 aa15.7■□□□□ 0.1
NCKIPSD-204ENST00000416649 HS2ST1Q7LGA3 356 aa15.7■□□□□ 0.1
NCKIPSD-204ENST00000416649 GPBP1Q86WP2 473 aa15.7■□□□□ 0.1
NCKIPSD-204ENST00000416649 ZNF444Q8N0Y2 327 aaPredicted RBP15.7■□□□□ 0.1
NCKIPSD-204ENST00000416649 STMN2Q93045 179 aa15.7■□□□□ 0.1
NCKIPSD-204ENST00000416649 GRAMD1AQ96CP6 724 aa15.7■□□□□ 0.1
NCKIPSD-204ENST00000416649 LRRC27Q9C0I9 530 aa15.7■□□□□ 0.1
NCKIPSD-204ENST00000416649 ZNF831Q5JPB2 1677 aa15.69■□□□□ 0.1
NCKIPSD-204ENST00000416649 A0A1B0GUL6 1792 aa15.69■□□□□ 0.1
NCKIPSD-204ENST00000416649 PRKCIP41743 596 aa15.69■□□□□ 0.1
NCKIPSD-204ENST00000416649 NPEPPSP55786 919 aa15.69■□□□□ 0.1
NCKIPSD-204ENST00000416649 ARHGAP44Q17R89 818 aa15.69■□□□□ 0.1
NCKIPSD-204ENST00000416649 C12orf60Q5U649 245 aa15.69■□□□□ 0.1
NCKIPSD-204ENST00000416649 VCX3BQ9H321 246 aa15.69■□□□□ 0.1
NCKIPSD-204ENST00000416649 VCX3AQ9NNX9 186 aa15.69■□□□□ 0.1
NCKIPSD-204ENST00000416649 DNAAF2Q9NVR5 837 aaKnown RBP15.69■□□□□ 0.1
NCKIPSD-204ENST00000416649 ZFP69BQ9UJL9 534 aa15.69■□□□□ 0.1
NCKIPSD-204ENST00000416649 DCTN4Q9UJW0 460 aa15.69■□□□□ 0.1
NCKIPSD-204ENST00000416649 COG5Q9UP83 839 aa15.69■□□□□ 0.1
NCKIPSD-204ENST00000416649 KIAA1024Q9UPX6 916 aa15.69■□□□□ 0.1
NCKIPSD-204ENST00000416649 CLIC2O15247 247 aa15.69■□□□□ 0.1
NCKIPSD-204ENST00000416649 DCTN3O75935 186 aa15.69■□□□□ 0.1
NCKIPSD-204ENST00000416649 TTLL1O95922 423 aa15.69■□□□□ 0.1
NCKIPSD-204ENST00000416649 PCP11498 1178 aaKnown RBP15.69■□□□□ 0.1
NCKIPSD-204ENST00000416649 CETPP11597 493 aa15.69■□□□□ 0.1
NCKIPSD-204ENST00000416649 GRM4Q14833 912 aa15.69■□□□□ 0.1
NCKIPSD-204ENST00000416649 PALB2Q86YC2 1186 aa15.69■□□□□ 0.1
NCKIPSD-204ENST00000416649 UBL4BQ8N7F7 174 aa15.69■□□□□ 0.1
NCKIPSD-204ENST00000416649 C1orf54Q8WWF1 131 aa15.69■□□□□ 0.1
NCKIPSD-204ENST00000416649 COA7Q96BR5 231 aa15.69■□□□□ 0.1
NCKIPSD-204ENST00000416649 PPP1R1BQ9UD71 204 aaPredicted RBP15.69■□□□□ 0.1
NCKIPSD-204ENST00000416649 NAALADL1Q9UQQ1 740 aa15.69■□□□□ 0.1
NCKIPSD-204ENST00000416649 DIS3Q9Y2L1 958 aaKnown RBP15.69■□□□□ 0.1
NCKIPSD-204ENST00000416649 PLSCR1O15162 318 aa15.68■□□□□ 0.1
NCKIPSD-204ENST00000416649 TNFAIP3P21580 790 aa15.68■□□□□ 0.1
NCKIPSD-204ENST00000416649 HOXA10P31260 410 aaPredicted RBP15.68■□□□□ 0.1
NCKIPSD-204ENST00000416649 CASP4P49662 377 aa15.68■□□□□ 0.1
NCKIPSD-204ENST00000416649 CASP5P51878 434 aa15.68■□□□□ 0.1
NCKIPSD-204ENST00000416649 YARSP54577 528 aaKnown RBP15.68■□□□□ 0.1
NCKIPSD-204ENST00000416649 DEUP1Q05D60 604 aa15.68■□□□□ 0.1
NCKIPSD-204ENST00000416649 PPATQ06203 517 aa15.68■□□□□ 0.1
NCKIPSD-204ENST00000416649 ACVR2BQ13705 512 aa15.68■□□□□ 0.1
NCKIPSD-204ENST00000416649 PDIA5Q14554 519 aa15.68■□□□□ 0.1
NCKIPSD-204ENST00000416649 CNPY1Q3B7I2 92 aa15.68■□□□□ 0.1
NCKIPSD-204ENST00000416649 C4orf50Q6ZRC1 276 aa15.68■□□□□ 0.1
NCKIPSD-204ENST00000416649 TRMT10CQ7L0Y3 403 aaKnown RBP15.68■□□□□ 0.1
NCKIPSD-204ENST00000416649 ATL2Q8NHH9 583 aa15.68■□□□□ 0.1
NCKIPSD-204ENST00000416649 ART4Q93070 314 aa15.68■□□□□ 0.1
NCKIPSD-204ENST00000416649 MCUR1Q96AQ8 359 aa15.68■□□□□ 0.1
NCKIPSD-204ENST00000416649 DTNBP1Q96EV8 351 aa15.68■□□□□ 0.1
NCKIPSD-204ENST00000416649 UBN1Q9NPG3 1134 aa15.68■□□□□ 0.1
NCKIPSD-204ENST00000416649 SYNGAP1Q96PV0 1343 aa15.68■□□□□ 0.1
NCKIPSD-204ENST00000416649 MAP3K7O43318 606 aa15.68■□□□□ 0.1
NCKIPSD-204ENST00000416649 LRRN2O75325 713 aa15.68■□□□□ 0.1
NCKIPSD-204ENST00000416649 TBX10O75333 385 aa15.68■□□□□ 0.1
NCKIPSD-204ENST00000416649 LMNAP02545 664 aaKnown RBP15.68■□□□□ 0.1
NCKIPSD-204ENST00000416649 FGRP09769 529 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms