RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 MYH11P35749 1972 aa10.5□□□□□ -0.73
CD44-206ENST00000415148 SKAP2O75563 359 aaPredicted RBP10.5□□□□□ -0.73
CD44-206ENST00000415148 LYPLA2O95372 231 aa10.5□□□□□ -0.73
CD44-206ENST00000415148 CLTAP09496 248 aa10.5□□□□□ -0.73
CD44-206ENST00000415148 PYGMP11217 842 aa10.5□□□□□ -0.73
CD44-206ENST00000415148 PLS3P13797 630 aa10.5□□□□□ -0.73
CD44-206ENST00000415148 ATP5DP30049 168 aa10.5□□□□□ -0.73
CD44-206ENST00000415148 RWDD2BP57060 319 aa10.5□□□□□ -0.73
CD44-206ENST00000415148 GTF2BQ00403 316 aa10.5□□□□□ -0.73
CD44-206ENST00000415148 RASA3Q14644 834 aa10.5□□□□□ -0.73
CD44-206ENST00000415148 TNIP1Q15025 636 aa10.5□□□□□ -0.73
CD44-206ENST00000415148 C1orf220Q5T0J3 134 aa10.5□□□□□ -0.73
CD44-206ENST00000415148 CCDC105Q8IYK2 499 aa10.5□□□□□ -0.73
CD44-206ENST00000415148 MAIP1Q8WWC4 291 aa10.5□□□□□ -0.73
CD44-206ENST00000415148 SAMD15Q9P1V8 674 aa10.5□□□□□ -0.73
CD44-206ENST00000415148 GTF3C4Q9UKN8 822 aa10.5□□□□□ -0.73
CD44-206ENST00000415148 CEP83Q9Y592 693 aa10.5□□□□□ -0.73
CD44-206ENST00000415148 SRCAPQ6ZRS2 3230 aa10.5□□□□□ -0.73
CD44-206ENST00000415148 SLX4Q8IY92 1834 aa10.5□□□□□ -0.73
CD44-206ENST00000415148 FSCN2O14926 492 aa10.5□□□□□ -0.73
CD44-206ENST00000415148 ATMINO43313 823 aaPredicted RBP10.5□□□□□ -0.73
CD44-206ENST00000415148 SGPL1O95470 568 aa10.5□□□□□ -0.73
CD44-206ENST00000415148 ITIH2P19823 946 aa10.5□□□□□ -0.73
CD44-206ENST00000415148 KCNJ1P48048 391 aa10.5□□□□□ -0.73
CD44-206ENST00000415148 CALCOCO2Q13137 446 aa10.5□□□□□ -0.73
CD44-206ENST00000415148 SIX1Q15475 284 aaPredicted RBP10.5□□□□□ -0.73
CD44-206ENST00000415148 MSL1Q68DK7 614 aa10.5□□□□□ -0.73
CD44-206ENST00000415148 CC2D2BQ6DHV5 1058 aa10.5□□□□□ -0.73
CD44-206ENST00000415148 ZNF746Q6NUN9 644 aaPredicted RBP10.5□□□□□ -0.73
CD44-206ENST00000415148 OTUD6AQ7L8S5 288 aa10.5□□□□□ -0.73
CD44-206ENST00000415148 PNMA8AQ86V59 439 aaPredicted RBP10.5□□□□□ -0.73
CD44-206ENST00000415148 BANK1Q8NDB2 785 aa10.5□□□□□ -0.73
CD44-206ENST00000415148 MGARPQ8TDB4 240 aa10.5□□□□□ -0.73
CD44-206ENST00000415148 SHC3Q92529 594 aa10.5□□□□□ -0.73
CD44-206ENST00000415148 BTBD6Q96KE9 485 aa10.5□□□□□ -0.73
CD44-206ENST00000415148 SERPINB12Q96P63 405 aa10.5□□□□□ -0.73
CD44-206ENST00000415148 PCDHB18PQ96TA0 734 aa10.5□□□□□ -0.73
CD44-206ENST00000415148 DDX23Q9BUQ8 820 aaKnown RBP10.5□□□□□ -0.73
CD44-206ENST00000415148 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.5□□□□□ -0.73
CD44-206ENST00000415148 ACP6Q9NPH0 428 aa10.5□□□□□ -0.73
CD44-206ENST00000415148 HOMER3Q9NSC5 361 aa10.5□□□□□ -0.73
CD44-206ENST00000415148 HSPBP1Q9NZL4 362 aa10.5□□□□□ -0.73
CD44-206ENST00000415148 TRIM33Q9UPN9 1127 aa10.5□□□□□ -0.73
CD44-206ENST00000415148 HGSO14964 777 aaPredicted RBP10.49□□□□□ -0.73
CD44-206ENST00000415148 UBOX5O94941 541 aa10.49□□□□□ -0.73
CD44-206ENST00000415148 ECEL1O95672 775 aa10.49□□□□□ -0.73
CD44-206ENST00000415148 VIMP08670 466 aaKnown RBP10.49□□□□□ -0.73
CD44-206ENST00000415148 CHRM1P11229 460 aaPredicted RBP10.49□□□□□ -0.73
CD44-206ENST00000415148 SLC8A1P32418 973 aa10.49□□□□□ -0.73
CD44-206ENST00000415148 MAN1A1P33908 653 aa10.49□□□□□ -0.73
CD44-206ENST00000415148 GCLMP48507 274 aa10.49□□□□□ -0.73
CD44-206ENST00000415148 CAV1Q03135 178 aa10.49□□□□□ -0.73
CD44-206ENST00000415148 ENPEPQ07075 957 aa10.49□□□□□ -0.73
CD44-206ENST00000415148 AUHQ13825 339 aaKnown RBP10.49□□□□□ -0.73
CD44-206ENST00000415148 RRP1BQ14684 758 aaKnown RBP10.49□□□□□ -0.73
CD44-206ENST00000415148 MIER3Q7Z3K6 550 aa10.49□□□□□ -0.73
CD44-206ENST00000415148 NOP9Q86U38 636 aaKnown RBP10.49□□□□□ -0.73
CD44-206ENST00000415148 SPICE1Q8N0Z3 855 aa10.49□□□□□ -0.73
CD44-206ENST00000415148 KIF2BQ8N4N8 673 aa10.49□□□□□ -0.73
CD44-206ENST00000415148 ZNF564Q8TBZ8 553 aaPredicted RBP10.49□□□□□ -0.73
CD44-206ENST00000415148 THOC1Q96FV9 657 aaKnown RBP10.49□□□□□ -0.73
CD44-206ENST00000415148 TMEM117Q9H0C3 514 aa10.49□□□□□ -0.73
CD44-206ENST00000415148 CCDC113Q9H0I3 377 aa10.49□□□□□ -0.73
CD44-206ENST00000415148 PCIF1Q9H4Z3 704 aa10.49□□□□□ -0.73
CD44-206ENST00000415148 VEZTQ9HBM0 779 aa10.49□□□□□ -0.73
CD44-206ENST00000415148 PTPN22Q9Y2R2 807 aa10.49□□□□□ -0.73
CD44-206ENST00000415148 COQ4Q9Y3A0 265 aa10.49□□□□□ -0.73
CD44-206ENST00000415148 CFAP73A6NFT4 308 aa10.48□□□□□ -0.73
CD44-206ENST00000415148 SPOPO43791 374 aa10.48□□□□□ -0.73
CD44-206ENST00000415148 ECE2O60344 883 aa10.48□□□□□ -0.73
CD44-206ENST00000415148 RARAP10276 462 aa10.48□□□□□ -0.73
CD44-206ENST00000415148 MXI1P50539 228 aa10.48□□□□□ -0.73
CD44-206ENST00000415148 PDE6CP51160 858 aa10.48□□□□□ -0.73
CD44-206ENST00000415148 CNGA2Q16280 664 aa10.48□□□□□ -0.73
CD44-206ENST00000415148 MIGA2Q7L4E1 593 aa10.48□□□□□ -0.73
CD44-206ENST00000415148 KIFAP3Q92845 792 aa10.48□□□□□ -0.73
CD44-206ENST00000415148 CSRNP1Q96S65 589 aa10.48□□□□□ -0.73
CD44-206ENST00000415148 NUP85Q9BW27 656 aa10.48□□□□□ -0.73
CD44-206ENST00000415148 TDRD3Q9H7E2 651 aaKnown RBP10.48□□□□□ -0.73
CD44-206ENST00000415148 CTNNAL1Q9UBT7 734 aa10.48□□□□□ -0.73
CD44-206ENST00000415148 FEM1BQ9UK73 627 aa10.48□□□□□ -0.73
CD44-206ENST00000415148 PNMA3Q9UL41 463 aa10.48□□□□□ -0.73
CD44-206ENST00000415148 EXOC7Q9UPT5 735 aa10.48□□□□□ -0.73
CD44-206ENST00000415148 TISP43B9A030 160 aa10.48□□□□□ -0.73
CD44-206ENST00000415148 TP73O15350 636 aa10.48□□□□□ -0.73
CD44-206ENST00000415148 GTF2H1P32780 548 aa10.48□□□□□ -0.73
CD44-206ENST00000415148 ECE1P42892 770 aa10.48□□□□□ -0.73
CD44-206ENST00000415148 GPC3P51654 580 aa10.48□□□□□ -0.73
CD44-206ENST00000415148 HSD17B4P51659 736 aa10.48□□□□□ -0.73
CD44-206ENST00000415148 FMO1Q01740 532 aa10.48□□□□□ -0.73
CD44-206ENST00000415148 CDR2Q01850 454 aa10.48□□□□□ -0.73
CD44-206ENST00000415148 MYO1EQ12965 1108 aa10.48□□□□□ -0.73
CD44-206ENST00000415148 LONRF1Q17RB8 773 aa10.48□□□□□ -0.73
CD44-206ENST00000415148 ACAD10Q6JQN1 1059 aa10.48□□□□□ -0.73
CD44-206ENST00000415148 CCDC174Q6PII3 467 aa10.48□□□□□ -0.73
CD44-206ENST00000415148 RNF207Q6ZRF8 634 aa10.48□□□□□ -0.73
CD44-206ENST00000415148 HAUS6Q7Z4H7 955 aa10.48□□□□□ -0.73
CD44-206ENST00000415148 CCDC63Q8NA47 563 aa10.48□□□□□ -0.73
CD44-206ENST00000415148 AGAP11Q8TF27 550 aa10.48□□□□□ -0.73
CD44-206ENST00000415148 ELMO3Q96BJ8 720 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms