RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 SIP14410 1827 aa10.6□□□□□ -0.71
SS18-203ENST00000415083 SYNGAP1Q96PV0 1343 aa10.6□□□□□ -0.71
SS18-203ENST00000415083 ARHGEF35A5YM69 484 aa10.59□□□□□ -0.71
SS18-203ENST00000415083 PLS3P13797 630 aa10.59□□□□□ -0.71
SS18-203ENST00000415083 CAP2P40123 477 aa10.59□□□□□ -0.71
SS18-203ENST00000415083 DRP2Q13474 957 aa10.59□□□□□ -0.71
SS18-203ENST00000415083 MIGA2Q7L4E1 593 aa10.59□□□□□ -0.71
SS18-203ENST00000415083 TAS1R3Q7RTX0 852 aa10.59□□□□□ -0.71
SS18-203ENST00000415083 ZNF564Q8TBZ8 553 aaPredicted RBP10.59□□□□□ -0.71
SS18-203ENST00000415083 PI4K2AQ9BTU6 479 aa10.59□□□□□ -0.71
SS18-203ENST00000415083 CDC42EP4Q9H3Q1 356 aaKnown RBP10.59□□□□□ -0.71
SS18-203ENST00000415083 A1CFQ9NQ94 594 aaKnown RBP10.59□□□□□ -0.71
SS18-203ENST00000415083 GGT7Q9UJ14 662 aa10.59□□□□□ -0.71
SS18-203ENST00000415083 UBIAD1Q9Y5Z9 338 aa10.59□□□□□ -0.71
SS18-203ENST00000415083 MGAMO43451 1857 aa10.59□□□□□ -0.71
SS18-203ENST00000415083 CCT8L1PA6NM43 557 aa10.59□□□□□ -0.71
SS18-203ENST00000415083 PMM2O15305 246 aa10.59□□□□□ -0.71
SS18-203ENST00000415083 MGRN1O60291 552 aa10.59□□□□□ -0.71
SS18-203ENST00000415083 MGAT5Q09328 741 aa10.59□□□□□ -0.71
SS18-203ENST00000415083 TKFCQ3LXA3 575 aa10.59□□□□□ -0.71
SS18-203ENST00000415083 WLSQ5T9L3 541 aa10.59□□□□□ -0.71
SS18-203ENST00000415083 SEPT14Q6ZU15 432 aa10.59□□□□□ -0.71
SS18-203ENST00000415083 INTS8Q75QN2 995 aaKnown RBP10.59□□□□□ -0.71
SS18-203ENST00000415083 TRMT1LQ7Z2T5 733 aaKnown RBP10.59□□□□□ -0.71
SS18-203ENST00000415083 HAUS6Q7Z4H7 955 aa10.59□□□□□ -0.71
SS18-203ENST00000415083 SYCP3Q8IZU3 236 aa10.59□□□□□ -0.71
SS18-203ENST00000415083 POMGNT1Q8WZA1 660 aa10.59□□□□□ -0.71
SS18-203ENST00000415083 GMLQ99445 158 aa10.59□□□□□ -0.71
SS18-203ENST00000415083 FAM118BQ9BPY3 351 aa10.59□□□□□ -0.71
SS18-203ENST00000415083 TMEM39BQ9GZU3 492 aa10.59□□□□□ -0.71
SS18-203ENST00000415083 KDM4CQ9H3R0 1056 aa10.59□□□□□ -0.71
SS18-203ENST00000415083 LRRC19Q9H756 370 aa10.59□□□□□ -0.71
SS18-203ENST00000415083 COQ4Q9Y3A0 265 aa10.59□□□□□ -0.71
SS18-203ENST00000415083 SPDYE2BA6NHP3 402 aa10.59□□□□□ -0.71
SS18-203ENST00000415083 FSCN2O14926 492 aa10.59□□□□□ -0.71
SS18-203ENST00000415083 SPDYE6P0CI01 402 aa10.59□□□□□ -0.71
SS18-203ENST00000415083 ADCY2Q08462 1091 aa10.59□□□□□ -0.71
SS18-203ENST00000415083 LRRC14Q15048 493 aa10.59□□□□□ -0.71
SS18-203ENST00000415083 SAMD1Q6SPF0 538 aaPredicted RBP10.59□□□□□ -0.71
SS18-203ENST00000415083 MICALCLQ6ZW33 695 aa10.59□□□□□ -0.71
SS18-203ENST00000415083 CACNA2D3Q8IZS8 1091 aa10.59□□□□□ -0.71
SS18-203ENST00000415083 TMEM161BQ8NDZ6 487 aa10.59□□□□□ -0.71
SS18-203ENST00000415083 PARD3BQ8TEW8 1205 aa10.59□□□□□ -0.71
SS18-203ENST00000415083 WNK4Q96J92 1243 aa10.59□□□□□ -0.71
SS18-203ENST00000415083 RIT2Q99578 217 aa10.59□□□□□ -0.71
SS18-203ENST00000415083 YY1AP1Q9H869 796 aa10.59□□□□□ -0.71
SS18-203ENST00000415083 DNAJC17Q9NVM6 304 aaKnown RBP10.59□□□□□ -0.71
SS18-203ENST00000415083 EURLQ9NYK6 297 aa10.59□□□□□ -0.71
SS18-203ENST00000415083 PTPRJQ12913 1337 aa10.59□□□□□ -0.71
SS18-203ENST00000415083 MYPNQ86TC9 1320 aa10.59□□□□□ -0.71
SS18-203ENST00000415083 MIF4GDA9UHW6 222 aaKnown RBP10.58□□□□□ -0.72
SS18-203ENST00000415083 DNAJC8O75937 253 aaPredicted RBP10.58□□□□□ -0.72
SS18-203ENST00000415083 GZMAP12544 262 aa10.58□□□□□ -0.72
SS18-203ENST00000415083 UNGP13051 313 aaPredicted RBP10.58□□□□□ -0.72
SS18-203ENST00000415083 RARGP13631 454 aa10.58□□□□□ -0.72
SS18-203ENST00000415083 ELF3P78545 371 aaPredicted RBP10.58□□□□□ -0.72
SS18-203ENST00000415083 IFFO1Q0D2I5 559 aa10.58□□□□□ -0.72
SS18-203ENST00000415083 DENND2CQ68D51 928 aa10.58□□□□□ -0.72
SS18-203ENST00000415083 XXYLT1Q8NBI6 393 aa10.58□□□□□ -0.72
SS18-203ENST00000415083 NCAPGQ9BPX3 1015 aa10.58□□□□□ -0.72
SS18-203ENST00000415083 HAPLN2Q9GZV7 340 aa10.58□□□□□ -0.72
SS18-203ENST00000415083 ST6GALNAC4Q9H4F1 302 aa10.58□□□□□ -0.72
SS18-203ENST00000415083 SYNPO2Q9UMS6 1093 aa10.58□□□□□ -0.72
SS18-203ENST00000415083 UMODL1Q5DID0 1318 aa10.58□□□□□ -0.72
SS18-203ENST00000415083 G3V3G9 751 aa10.58□□□□□ -0.72
SS18-203ENST00000415083 ASAP2O43150 1006 aa10.58□□□□□ -0.72
SS18-203ENST00000415083 BCRP11274 1271 aa10.58□□□□□ -0.72
SS18-203ENST00000415083 RFX1P22670 979 aa10.58□□□□□ -0.72
SS18-203ENST00000415083 PDE6BP35913 854 aa10.58□□□□□ -0.72
SS18-203ENST00000415083 USP8P40818 1118 aa10.58□□□□□ -0.72
SS18-203ENST00000415083 PEX3P56589 373 aa10.58□□□□□ -0.72
SS18-203ENST00000415083 SNX1Q13596 522 aa10.58□□□□□ -0.72
SS18-203ENST00000415083 TNIP1Q15025 636 aa10.58□□□□□ -0.72
SS18-203ENST00000415083 DCAF8Q5TAQ9 597 aa10.58□□□□□ -0.72
SS18-203ENST00000415083 MFSD5Q6N075 450 aa10.58□□□□□ -0.72
SS18-203ENST00000415083 CCDC121Q6ZUS5 278 aa10.58□□□□□ -0.72
SS18-203ENST00000415083 ANO5Q75V66 913 aa10.58□□□□□ -0.72
SS18-203ENST00000415083 OTUD6AQ7L8S5 288 aa10.58□□□□□ -0.72
SS18-203ENST00000415083 SELENOSQ9BQE4 189 aa10.58□□□□□ -0.72
SS18-203ENST00000415083 WNT8AQ9H1J5 351 aa10.58□□□□□ -0.72
SS18-203ENST00000415083 CNOT10Q9H9A5 744 aaKnown RBP10.58□□□□□ -0.72
SS18-203ENST00000415083 ZNF70Q9UC06 446 aaPredicted RBP10.58□□□□□ -0.72
SS18-203ENST00000415083 P4HA2O15460 535 aa10.58□□□□□ -0.72
SS18-203ENST00000415083 PPP1R12BO60237 982 aaPredicted RBP10.58□□□□□ -0.72
SS18-203ENST00000415083 MAPTP10636 758 aaKnown RBP10.58□□□□□ -0.72
SS18-203ENST00000415083 GCAP28676 217 aa10.58□□□□□ -0.72
SS18-203ENST00000415083 IFNAR2P48551 515 aa10.58□□□□□ -0.72
SS18-203ENST00000415083 SNRNP35Q16560 246 aaKnown RBP10.58□□□□□ -0.72
SS18-203ENST00000415083 RNF207Q6ZRF8 634 aa10.58□□□□□ -0.72
SS18-203ENST00000415083 MIER3Q7Z3K6 550 aa10.58□□□□□ -0.72
SS18-203ENST00000415083 GLIS1Q8NBF1 620 aa10.58□□□□□ -0.72
SS18-203ENST00000415083 SLCO2A1Q92959 643 aa10.58□□□□□ -0.72
SS18-203ENST00000415083 DDX27Q96GQ7 796 aaKnown RBP10.58□□□□□ -0.72
SS18-203ENST00000415083 ELAC2Q9BQ52 826 aaKnown RBP10.58□□□□□ -0.72
SS18-203ENST00000415083 MLXIPLQ9NP71 852 aa10.58□□□□□ -0.72
SS18-203ENST00000415083 ZBTB12Q9Y330 459 aaPredicted RBP10.58□□□□□ -0.72
SS18-203ENST00000415083 PLA2G6O60733 806 aa10.57□□□□□ -0.72
SS18-203ENST00000415083 P4HBP07237 508 aaKnown RBP10.57□□□□□ -0.72
SS18-203ENST00000415083 GHRP10912 638 aa10.57□□□□□ -0.72
SS18-203ENST00000415083 TCF4P15884 667 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms