RNA–Protein interactions for RNA: ENST00000415046.6

PTPRK-209, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 1,029 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-209ENST00000415046 ACAP1Q15027 740 aa5.87□□□□□ -1.47
PTPRK-209ENST00000415046 ZNF174Q15697 407 aa5.87□□□□□ -1.47
PTPRK-209ENST00000415046 GAGE13Q4V321 117 aa5.87□□□□□ -1.47
PTPRK-209ENST00000415046 PRAMEF9Q5VWM5 478 aa5.87□□□□□ -1.47
PTPRK-209ENST00000415046 ZNF772Q68DY9 489 aaPredicted RBP5.87□□□□□ -1.47
PTPRK-209ENST00000415046 BMP8AQ7Z5Y6 402 aa5.87□□□□□ -1.47
PTPRK-209ENST00000415046 CLEC14AQ86T13 490 aa5.87□□□□□ -1.47
PTPRK-209ENST00000415046 ANKRD53Q8N9V6 530 aa5.87□□□□□ -1.47
PTPRK-209ENST00000415046 ZNF483Q8TF39 744 aaPredicted RBP5.87□□□□□ -1.47
PTPRK-209ENST00000415046 SREK1Q8WXA9 508 aaKnown RBP5.87□□□□□ -1.47
PTPRK-209ENST00000415046 COG3Q96JB2 828 aa5.87□□□□□ -1.47
PTPRK-209ENST00000415046 TRIM8Q9BZR9 551 aa5.87□□□□□ -1.47
PTPRK-209ENST00000415046 ATRNO75882 1429 aa5.87□□□□□ -1.47
PTPRK-209ENST00000415046 PARP4Q9UKK3 1724 aaKnown RBP5.87□□□□□ -1.47
PTPRK-209ENST00000415046 SHANK3Q9BYB0 1731 aa5.86□□□□□ -1.47
PTPRK-209ENST00000415046 THSD7AQ9UPZ6 1657 aa5.86□□□□□ -1.47
PTPRK-209ENST00000415046 LRRC37A3O60309 1634 aa5.86□□□□□ -1.47
PTPRK-209ENST00000415046 ABCC6O95255 1503 aa5.86□□□□□ -1.47
PTPRK-209ENST00000415046 COL5A2P05997 1499 aaPredicted RBP5.86□□□□□ -1.47
PTPRK-209ENST00000415046 CGNL1Q0VF96 1302 aa5.86□□□□□ -1.47
PTPRK-209ENST00000415046 WDR33Q9C0J8 1336 aaKnown RBP5.86□□□□□ -1.47
PTPRK-209ENST00000415046 PTX3P26022 381 aaPredicted RBP5.86□□□□□ -1.47
PTPRK-209ENST00000415046 TNNT2P45379 298 aaPredicted RBP5.86□□□□□ -1.47
PTPRK-209ENST00000415046 CRHR2Q13324 411 aa5.86□□□□□ -1.47
PTPRK-209ENST00000415046 MYBPC3Q14896 1274 aa5.86□□□□□ -1.47
PTPRK-209ENST00000415046 PIK3R6Q5UE93 754 aa5.86□□□□□ -1.47
PTPRK-209ENST00000415046 CREB3L3Q68CJ9 461 aa5.86□□□□□ -1.47
PTPRK-209ENST00000415046 ESRP1Q6NXG1 681 aaKnown RBP5.86□□□□□ -1.47
PTPRK-209ENST00000415046 GAREM2Q75VX8 874 aa5.86□□□□□ -1.47
PTPRK-209ENST00000415046 MIEF2Q96C03 454 aa5.86□□□□□ -1.47
PTPRK-209ENST00000415046 CHFRQ96EP1 664 aa5.86□□□□□ -1.47
PTPRK-209ENST00000415046 DYDC2Q96IM9 177 aa5.86□□□□□ -1.47
PTPRK-209ENST00000415046 RPL10LQ96L21 214 aaKnown RBP5.86□□□□□ -1.47
PTPRK-209ENST00000415046 WDR92Q96MX6 357 aa5.86□□□□□ -1.47
PTPRK-209ENST00000415046 PITHD1Q9GZP4 211 aaPredicted RBP5.86□□□□□ -1.47
PTPRK-209ENST00000415046 PARPBPQ9NWS1 579 aa5.86□□□□□ -1.47
PTPRK-209ENST00000415046 RGS12O14924 1447 aa5.85□□□□□ -1.47
PTPRK-209ENST00000415046 CPDO75976 1380 aa5.85□□□□□ -1.47
PTPRK-209ENST00000415046 FYB1O15117 783 aa5.85□□□□□ -1.47
PTPRK-209ENST00000415046 RFPL3O75679 317 aa5.85□□□□□ -1.47
PTPRK-209ENST00000415046 PEX11BO96011 259 aa5.85□□□□□ -1.47
PTPRK-209ENST00000415046 ADH4P08319 380 aa5.85□□□□□ -1.47
PTPRK-209ENST00000415046 JMJD7P0C870 316 aa5.85□□□□□ -1.47
PTPRK-209ENST00000415046 SDSP20132 328 aa5.85□□□□□ -1.47
PTPRK-209ENST00000415046 FLT3P36888 993 aa5.85□□□□□ -1.47
PTPRK-209ENST00000415046 BCAR1P56945 870 aa5.85□□□□□ -1.47
PTPRK-209ENST00000415046 Q6ZRM9 215 aa5.85□□□□□ -1.47
PTPRK-209ENST00000415046 KANSL1Q7Z3B3 1105 aa5.85□□□□□ -1.47
PTPRK-209ENST00000415046 UNC5CLQ8IV45 518 aa5.85□□□□□ -1.47
PTPRK-209ENST00000415046 PLA2G15Q8NCC3 412 aa5.85□□□□□ -1.47
PTPRK-209ENST00000415046 KCNH5Q8NCM2 988 aa5.85□□□□□ -1.47
PTPRK-209ENST00000415046 SH3TC2Q8TF17 1288 aa5.85□□□□□ -1.47
PTPRK-209ENST00000415046 RPGRQ92834 1020 aaKnown RBP5.85□□□□□ -1.47
PTPRK-209ENST00000415046 MRFAP1L1Q96HT8 127 aa5.85□□□□□ -1.47
PTPRK-209ENST00000415046 TUBGCP5Q96RT8 1024 aa5.85□□□□□ -1.47
PTPRK-209ENST00000415046 ORAI3Q9BRQ5 295 aa5.85□□□□□ -1.47
PTPRK-209ENST00000415046 MMRN2Q9H8L6 949 aa5.85□□□□□ -1.47
PTPRK-209ENST00000415046 KANSL2Q9H9L4 492 aa5.85□□□□□ -1.47
PTPRK-209ENST00000415046 IL23AQ9NPF7 189 aa5.85□□□□□ -1.47
PTPRK-209ENST00000415046 TMEM260Q9NX78 707 aa5.85□□□□□ -1.47
PTPRK-209ENST00000415046 USP35Q9P2H5 1018 aa5.85□□□□□ -1.47
PTPRK-209ENST00000415046 TRPC5Q9UL62 973 aaPredicted RBP5.85□□□□□ -1.47
PTPRK-209ENST00000415046 KNSTRNQ9Y448 316 aa5.85□□□□□ -1.47
PTPRK-209ENST00000415046 ITGB4P16144 1822 aa5.85□□□□□ -1.47
PTPRK-209ENST00000415046 RGPD1P0DJD0 1748 aa5.85□□□□□ -1.47
PTPRK-209ENST00000415046 DLG5Q8TDM6 1919 aa5.84□□□□□ -1.47
PTPRK-209ENST00000415046 PPP1R12AO14974 1030 aaPredicted RBP5.84□□□□□ -1.47
PTPRK-209ENST00000415046 PPM1GO15355 546 aaPredicted RBP5.84□□□□□ -1.47
PTPRK-209ENST00000415046 VSIG10L2P0DP72 767 aa5.84□□□□□ -1.47
PTPRK-209ENST00000415046 MAKP20794 623 aa5.84□□□□□ -1.47
PTPRK-209ENST00000415046 SCNN1GP51170 649 aa5.84□□□□□ -1.47
PTPRK-209ENST00000415046 EVA1CP58658 441 aa5.84□□□□□ -1.47
PTPRK-209ENST00000415046 RBM6P78332 1123 aaKnown RBP5.84□□□□□ -1.47
PTPRK-209ENST00000415046 ADCY1Q08828 1119 aa5.84□□□□□ -1.47
PTPRK-209ENST00000415046 RRS1Q15050 365 aaKnown RBP5.84□□□□□ -1.47
PTPRK-209ENST00000415046 CC2D1BQ5T0F9 858 aaKnown RBP5.84□□□□□ -1.47
PTPRK-209ENST00000415046 CDCA2Q69YH5 1023 aaPredicted RBP5.84□□□□□ -1.47
PTPRK-209ENST00000415046 FAM111BQ6SJ93 734 aa5.84□□□□□ -1.47
PTPRK-209ENST00000415046 UBE2R2Q712K3 238 aaPredicted RBP5.84□□□□□ -1.47
PTPRK-209ENST00000415046 ARHGEF25Q86VW2 580 aa5.84□□□□□ -1.47
PTPRK-209ENST00000415046 NEU4Q8WWR8 484 aaPredicted RBP5.84□□□□□ -1.47
PTPRK-209ENST00000415046 LTV1Q96GA3 475 aaPredicted RBP5.84□□□□□ -1.47
PTPRK-209ENST00000415046 ELF4Q99607 663 aaPredicted RBP5.84□□□□□ -1.47
PTPRK-209ENST00000415046 DNAI1Q9UI46 699 aa5.84□□□□□ -1.47
PTPRK-209ENST00000415046 SPO11Q9Y5K1 396 aa5.84□□□□□ -1.47
PTPRK-209ENST00000415046 DOT1LQ8TEK3 1739 aa5.84□□□□□ -1.47
PTPRK-209ENST00000415046 TNS1Q9HBL0 1735 aaKnown RBP5.84□□□□□ -1.47
PTPRK-209ENST00000415046 AATKQ6ZMQ8 1374 aa5.83□□□□□ -1.48
PTPRK-209ENST00000415046 MAP3K19Q56UN5 1328 aa5.83□□□□□ -1.48
PTPRK-209ENST00000415046 A0A0A6YYJ9 748 aa5.83□□□□□ -1.48
PTPRK-209ENST00000415046 UBE2QL1A1L167 161 aa5.83□□□□□ -1.48
PTPRK-209ENST00000415046 TOX4O94842 621 aa5.83□□□□□ -1.48
PTPRK-209ENST00000415046 JUNP05412 331 aaKnown RBP5.83□□□□□ -1.48
PTPRK-209ENST00000415046 SLC9A1P19634 815 aa5.83□□□□□ -1.48
PTPRK-209ENST00000415046 AMPHP49418 695 aa5.83□□□□□ -1.48
PTPRK-209ENST00000415046 MAN2A2P49641 1150 aa5.83□□□□□ -1.48
PTPRK-209ENST00000415046 INHBCP55103 352 aa5.83□□□□□ -1.48
PTPRK-209ENST00000415046 VPS72Q15906 364 aa5.83□□□□□ -1.48
PTPRK-209ENST00000415046 MORC1Q86VD1 984 aa5.83□□□□□ -1.48
PTPRK-209ENST00000415046 LDLRAD3Q86YD5 345 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms