RNA–Protein interactions for RNA: ENST00000414558.2

ATG4C-204, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 464 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-204ENST00000414558 TIGD2Q4W5G0 525 aa7.24□□□□□ -1.25
ATG4C-204ENST00000414558 MBNL2Q5VZF2 373 aaKnown RBP7.24□□□□□ -1.25
ATG4C-204ENST00000414558 KCNV1Q6PIU1 500 aa7.24□□□□□ -1.25
ATG4C-204ENST00000414558 TRMT2AQ8IZ69 625 aaKnown RBP7.24□□□□□ -1.25
ATG4C-204ENST00000414558 PROKR1Q8TCW9 393 aa7.24□□□□□ -1.25
ATG4C-204ENST00000414558 COG1Q8WTW3 980 aa7.24□□□□□ -1.25
ATG4C-204ENST00000414558 CEP89Q96ST8 783 aa7.24□□□□□ -1.25
ATG4C-204ENST00000414558 UHRF1Q96T88 793 aaPredicted RBP7.24□□□□□ -1.25
ATG4C-204ENST00000414558 ADI1Q9BV57 179 aa7.24□□□□□ -1.25
ATG4C-204ENST00000414558 SPC25Q9HBM1 224 aa7.24□□□□□ -1.25
ATG4C-204ENST00000414558 TRPM5Q9NZQ8 1165 aa7.24□□□□□ -1.25
ATG4C-204ENST00000414558 A0A087X1B8 175 aa7.23□□□□□ -1.25
ATG4C-204ENST00000414558 GAGE12BA1L429 117 aa7.23□□□□□ -1.25
ATG4C-204ENST00000414558 GAGE12HA6NDE8 117 aa7.23□□□□□ -1.25
ATG4C-204ENST00000414558 LEFTY2O00292 366 aa7.23□□□□□ -1.25
ATG4C-204ENST00000414558 RNASET2O00584 256 aaKnown RBP7.23□□□□□ -1.25
ATG4C-204ENST00000414558 ABHD16AO95870 558 aa7.23□□□□□ -1.25
ATG4C-204ENST00000414558 POU3F3P20264 500 aaPredicted RBP7.23□□□□□ -1.25
ATG4C-204ENST00000414558 PER3P56645 1201 aa7.23□□□□□ -1.25
ATG4C-204ENST00000414558 ERVK-21P61565 698 aa7.23□□□□□ -1.25
ATG4C-204ENST00000414558 Q6ZVL8 140 aa7.23□□□□□ -1.25
ATG4C-204ENST00000414558 ZNF572Q7Z3I7 529 aaPredicted RBP7.23□□□□□ -1.25
ATG4C-204ENST00000414558 PLXDC1Q8IUK5 500 aa7.23□□□□□ -1.25
ATG4C-204ENST00000414558 IKZF4Q9H2S9 585 aa7.23□□□□□ -1.25
ATG4C-204ENST00000414558 CHST2Q9Y4C5 530 aa7.23□□□□□ -1.25
ATG4C-204ENST00000414558 SNRPA1P09661 255 aaKnown RBP7.22□□□□□ -1.25
ATG4C-204ENST00000414558 SPATA31D3P0C874 917 aa7.22□□□□□ -1.25
ATG4C-204ENST00000414558 MTNR1BP49286 362 aa7.22□□□□□ -1.25
ATG4C-204ENST00000414558 CLRN1P58418 232 aa7.22□□□□□ -1.25
ATG4C-204ENST00000414558 SP140Q13342 867 aa7.22□□□□□ -1.25
ATG4C-204ENST00000414558 PTPAQ15257 358 aa7.22□□□□□ -1.25
ATG4C-204ENST00000414558 CSRP2Q16527 193 aa7.22□□□□□ -1.25
ATG4C-204ENST00000414558 SPATA31D4Q6ZUB0 917 aa7.22□□□□□ -1.25
ATG4C-204ENST00000414558 RNF169Q8NCN4 708 aa7.22□□□□□ -1.25
ATG4C-204ENST00000414558 REPS2Q8NFH8 660 aa7.22□□□□□ -1.25
ATG4C-204ENST00000414558 MYEOVQ96EZ4 313 aa7.22□□□□□ -1.25
ATG4C-204ENST00000414558 MENTQ9BUN1 341 aa7.22□□□□□ -1.25
ATG4C-204ENST00000414558 FAM126AQ9BYI3 521 aaPredicted RBP7.22□□□□□ -1.25
ATG4C-204ENST00000414558 ZNF768Q9H5H4 540 aaKnown RBP7.22□□□□□ -1.25
ATG4C-204ENST00000414558 MOCS1Q9NZB8 636 aa7.22□□□□□ -1.25
ATG4C-204ENST00000414558 PHLDB1Q86UU1 1377 aa7.21□□□□□ -1.25
ATG4C-204ENST00000414558 RAMP2O60895 175 aa7.21□□□□□ -1.26
ATG4C-204ENST00000414558 IGSF3O75054 1194 aa7.21□□□□□ -1.26
ATG4C-204ENST00000414558 ENDOD1O94919 500 aa7.21□□□□□ -1.26
ATG4C-204ENST00000414558 ZSCAN20P17040 1043 aaPredicted RBP7.21□□□□□ -1.26
ATG4C-204ENST00000414558 SREBF1P36956 1147 aa7.21□□□□□ -1.26
ATG4C-204ENST00000414558 MCAMP43121 646 aa7.21□□□□□ -1.26
ATG4C-204ENST00000414558 RNASE9P60153 205 aaKnown RBP7.21□□□□□ -1.26
ATG4C-204ENST00000414558 PPP3CAQ08209 521 aa7.21□□□□□ -1.26
ATG4C-204ENST00000414558 KLF1Q13351 362 aaPredicted RBP7.21□□□□□ -1.26
ATG4C-204ENST00000414558 RRP12Q5JTH9 1297 aaKnown RBP7.21□□□□□ -1.26
ATG4C-204ENST00000414558 RNF187Q5TA31 235 aaPredicted RBP7.21□□□□□ -1.26
ATG4C-204ENST00000414558 SYT12Q8IV01 421 aa7.21□□□□□ -1.26
ATG4C-204ENST00000414558 AMOTL1Q8IY63 956 aa7.21□□□□□ -1.26
ATG4C-204ENST00000414558 RPUSD2Q8IZ73 545 aaKnown RBP7.21□□□□□ -1.26
ATG4C-204ENST00000414558 PQLC1Q8N2U9 271 aa7.21□□□□□ -1.26
ATG4C-204ENST00000414558 MLST8Q9BVC4 326 aa7.21□□□□□ -1.26
ATG4C-204ENST00000414558 PUS7LQ9H0K6 701 aaKnown RBP7.21□□□□□ -1.26
ATG4C-204ENST00000414558 DMRT3Q9NQL9 472 aa7.21□□□□□ -1.26
ATG4C-204ENST00000414558 LANCL2Q9NS86 450 aa7.21□□□□□ -1.26
ATG4C-204ENST00000414558 GPR45Q9Y5Y3 372 aa7.21□□□□□ -1.26
ATG4C-204ENST00000414558 HS3ST4Q9Y661 456 aa7.21□□□□□ -1.26
ATG4C-204ENST00000414558 CXorf49A8MYA2 514 aaPredicted RBP7.2□□□□□ -1.26
ATG4C-204ENST00000414558 OSMP13725 252 aa7.2□□□□□ -1.26
ATG4C-204ENST00000414558 IL2RBP14784 551 aa7.2□□□□□ -1.26
ATG4C-204ENST00000414558 ALOX15P16050 662 aaPredicted RBP7.2□□□□□ -1.26
ATG4C-204ENST00000414558 PTTG1IPP53801 180 aa7.2□□□□□ -1.26
ATG4C-204ENST00000414558 FAM189BP81408 668 aa7.2□□□□□ -1.26
ATG4C-204ENST00000414558 NOMO1Q15155 1222 aa7.2□□□□□ -1.26
ATG4C-204ENST00000414558 ATXN7L2Q5T6C5 722 aaPredicted RBP7.2□□□□□ -1.26
ATG4C-204ENST00000414558 LAIR1Q6GTX8 287 aa7.2□□□□□ -1.26
ATG4C-204ENST00000414558 Q6ZPA2 131 aa7.2□□□□□ -1.26
ATG4C-204ENST00000414558 NECAB2Q7Z6G3 386 aa7.2□□□□□ -1.26
ATG4C-204ENST00000414558 DDX42Q86XP3 938 aaKnown RBP eCLIP7.2□□□□□ -1.26
ATG4C-204ENST00000414558 SLC35B2Q8TB61 432 aa7.2□□□□□ -1.26
ATG4C-204ENST00000414558 SSH1Q8WYL5 1049 aa7.2□□□□□ -1.26
ATG4C-204ENST00000414558 HOXB13Q92826 284 aaPredicted RBP7.2□□□□□ -1.26
ATG4C-204ENST00000414558 TTPALQ9BTX7 342 aa7.2□□□□□ -1.26
ATG4C-204ENST00000414558 SENP6Q9GZR1 1112 aaPredicted RBP7.2□□□□□ -1.26
ATG4C-204ENST00000414558 AKIP1Q9NQ31 210 aa7.2□□□□□ -1.26
ATG4C-204ENST00000414558 SLC5A4Q9NY91 659 aa7.2□□□□□ -1.26
ATG4C-204ENST00000414558 ATRNL1Q5VV63 1379 aa7.2□□□□□ -1.26
ATG4C-204ENST00000414558 FAM171A2A8MVW0 826 aa7.19□□□□□ -1.26
ATG4C-204ENST00000414558 FOXN1O15353 648 aa7.19□□□□□ -1.26
ATG4C-204ENST00000414558 NCR1O76036 304 aa7.19□□□□□ -1.26
ATG4C-204ENST00000414558 GSPT1P15170 499 aaKnown RBP7.19□□□□□ -1.26
ATG4C-204ENST00000414558 ZFP36P26651 326 aaKnown RBP7.19□□□□□ -1.26
ATG4C-204ENST00000414558 MGAT2Q10469 447 aa7.19□□□□□ -1.26
ATG4C-204ENST00000414558 CRB2Q5IJ48 1285 aa7.19□□□□□ -1.26
ATG4C-204ENST00000414558 DRC7Q8IY82 874 aa7.19□□□□□ -1.26
ATG4C-204ENST00000414558 TRIM75PA6NK02 468 aa7.18□□□□□ -1.26
ATG4C-204ENST00000414558 TMEM200CA6NKL6 621 aa7.18□□□□□ -1.26
ATG4C-204ENST00000414558 HLA-DOAP06340 250 aa7.18□□□□□ -1.26
ATG4C-204ENST00000414558 KRT4P19013 534 aa7.18□□□□□ -1.26
ATG4C-204ENST00000414558 AGXTP21549 392 aa7.18□□□□□ -1.26
ATG4C-204ENST00000414558 GUCY1A2P33402 732 aa7.18□□□□□ -1.26
ATG4C-204ENST00000414558 AFMIDQ63HM1 303 aa7.18□□□□□ -1.26
ATG4C-204ENST00000414558 CNTD1Q8N815 330 aa7.18□□□□□ -1.26
ATG4C-204ENST00000414558 FBXO18Q8NFZ0 1043 aa7.18□□□□□ -1.26
ATG4C-204ENST00000414558 ZNF277Q9NRM2 450 aaPredicted RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms