RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 GLYCTKQ8IVS8 523 aa24.6■■□□□ 1.53
MSH6-202ENST00000411819 HASPINQ8TF76 798 aa24.6■■□□□ 1.53
MSH6-202ENST00000411819 GPR62Q9BZJ7 368 aa24.6■■□□□ 1.53
MSH6-202ENST00000411819 KCNH6Q9H252 994 aa24.6■■□□□ 1.53
MSH6-202ENST00000411819 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.6■■□□□ 1.53
MSH6-202ENST00000411819 SORCS3Q9UPU3 1222 aa24.6■■□□□ 1.53
MSH6-202ENST00000411819 DNM3Q9UQ16 869 aa24.6■■□□□ 1.53
MSH6-202ENST00000411819 GDAQ9Y2T3 454 aa24.6■■□□□ 1.53
MSH6-202ENST00000411819 H3BQV1 296 aa24.59■■□□□ 1.53
MSH6-202ENST00000411819 EFEMP2O95967 443 aa24.59■■□□□ 1.53
MSH6-202ENST00000411819 GJB2P29033 226 aa24.59■■□□□ 1.53
MSH6-202ENST00000411819 CDC25AP30304 524 aa24.59■■□□□ 1.53
MSH6-202ENST00000411819 PRPHP41219 470 aa24.59■■□□□ 1.53
MSH6-202ENST00000411819 EFNA5P52803 228 aa24.59■■□□□ 1.53
MSH6-202ENST00000411819 ZRSR1Q15695 479 aaKnown RBP24.59■■□□□ 1.53
MSH6-202ENST00000411819 DCAF4L1Q3SXM0 396 aa24.59■■□□□ 1.53
MSH6-202ENST00000411819 FBXL6Q8N531 539 aa24.59■■□□□ 1.53
MSH6-202ENST00000411819 RIN2Q8WYP3 895 aaPredicted RBP24.59■■□□□ 1.53
MSH6-202ENST00000411819 ASIC4Q96FT7 647 aa24.59■■□□□ 1.53
MSH6-202ENST00000411819 PAAF1Q9BRP4 392 aa24.59■■□□□ 1.53
MSH6-202ENST00000411819 RXFP1Q9HBX9 757 aa24.59■■□□□ 1.53
MSH6-202ENST00000411819 DPP7Q9UHL4 492 aa24.59■■□□□ 1.53
MSH6-202ENST00000411819 USTQ9Y2C2 406 aa24.59■■□□□ 1.53
MSH6-202ENST00000411819 SF3B1O75533 1304 aaKnown RBP eCLIP24.59■■□□□ 1.53
MSH6-202ENST00000411819 KMT2EQ8IZD2 1858 aa24.58■■□□□ 1.53
MSH6-202ENST00000411819 CCDC169A6NNP5 214 aa24.58■■□□□ 1.53
MSH6-202ENST00000411819 PTGESO14684 152 aa24.58■■□□□ 1.53
MSH6-202ENST00000411819 CD2BP2O95400 341 aaKnown RBP24.58■■□□□ 1.53
MSH6-202ENST00000411819 THP07101 528 aa24.58■■□□□ 1.53
MSH6-202ENST00000411819 ASGR2P07307 311 aa24.58■■□□□ 1.53
MSH6-202ENST00000411819 RILPL1Q5EBL4 403 aa24.58■■□□□ 1.53
MSH6-202ENST00000411819 ATF7IP2Q5U623 682 aa24.58■■□□□ 1.53
MSH6-202ENST00000411819 C15orf39Q6ZRI6 1047 aa24.58■■□□□ 1.53
MSH6-202ENST00000411819 PLCD3Q8N3E9 789 aa24.58■■□□□ 1.53
MSH6-202ENST00000411819 ACSF2Q96CM8 615 aaPredicted RBP24.58■■□□□ 1.53
MSH6-202ENST00000411819 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.58■■□□□ 1.53
MSH6-202ENST00000411819 CHST7Q9NS84 486 aa24.58■■□□□ 1.53
MSH6-202ENST00000411819 ZDBF2Q9HCK1 2354 aa24.57■■□□□ 1.52
MSH6-202ENST00000411819 HOXD11P31277 338 aaPredicted RBP24.57■■□□□ 1.52
MSH6-202ENST00000411819 PEX3P56589 373 aa24.57■■□□□ 1.52
MSH6-202ENST00000411819 DMP1Q13316 513 aaPredicted RBP24.57■■□□□ 1.52
MSH6-202ENST00000411819 IL17AQ16552 155 aa24.57■■□□□ 1.52
MSH6-202ENST00000411819 PALB2Q86YC2 1186 aa24.57■■□□□ 1.52
MSH6-202ENST00000411819 ZDHHC14Q8IZN3 488 aa24.57■■□□□ 1.52
MSH6-202ENST00000411819 LIMD1Q9UGP4 676 aa24.57■■□□□ 1.52
MSH6-202ENST00000411819 PHLPP2Q6ZVD8 1323 aa24.57■■□□□ 1.52
MSH6-202ENST00000411819 K7ERI5 159 aa24.56■■□□□ 1.52
MSH6-202ENST00000411819 HIP1RO75146 1068 aa24.56■■□□□ 1.52
MSH6-202ENST00000411819 KIF4AO95239 1232 aa24.56■■□□□ 1.52
MSH6-202ENST00000411819 BRD1O95696 1058 aa24.56■■□□□ 1.52
MSH6-202ENST00000411819 SPATA31D3P0C874 917 aa24.56■■□□□ 1.52
MSH6-202ENST00000411819 RPL17P18621 184 aaKnown RBP24.56■■□□□ 1.52
MSH6-202ENST00000411819 CREMQ03060 361 aa24.56■■□□□ 1.52
MSH6-202ENST00000411819 NT5DC1Q5TFE4 455 aa24.56■■□□□ 1.52
MSH6-202ENST00000411819 SPATA31D4Q6ZUB0 917 aa24.56■■□□□ 1.52
MSH6-202ENST00000411819 OTOP3Q7RTS5 596 aa24.56■■□□□ 1.52
MSH6-202ENST00000411819 APBB1IPQ7Z5R6 666 aaPredicted RBP24.56■■□□□ 1.52
MSH6-202ENST00000411819 UBALD2Q8IYN6 164 aa24.56■■□□□ 1.52
MSH6-202ENST00000411819 RUSC1Q9BVN2 902 aa24.56■■□□□ 1.52
MSH6-202ENST00000411819 CXCL16Q9H2A7 254 aa24.56■■□□□ 1.52
MSH6-202ENST00000411819 MTCL1Q9Y4B5 1905 aaKnown RBP24.55■■□□□ 1.52
MSH6-202ENST00000411819 TRIP11Q15643 1979 aa24.55■■□□□ 1.52
MSH6-202ENST00000411819 CCDC195A0A1B0GUA6 201 aa24.55■■□□□ 1.52
MSH6-202ENST00000411819 RFPL2O75678 378 aa24.55■■□□□ 1.52
MSH6-202ENST00000411819 NPTX2P47972 431 aa24.55■■□□□ 1.52
MSH6-202ENST00000411819 ATP2C1P98194 919 aaPredicted RBP24.55■■□□□ 1.52
MSH6-202ENST00000411819 NHLH1Q02575 133 aa24.55■■□□□ 1.52
MSH6-202ENST00000411819 GLRA4Q5JXX5 417 aa24.55■■□□□ 1.52
MSH6-202ENST00000411819 PRSS55Q6UWB4 352 aaPredicted RBP24.55■■□□□ 1.52
MSH6-202ENST00000411819 CEP57Q86XR8 500 aa24.55■■□□□ 1.52
MSH6-202ENST00000411819 CMASQ8NFW8 434 aaPredicted RBP24.55■■□□□ 1.52
MSH6-202ENST00000411819 DRC1Q96MC2 740 aa24.55■■□□□ 1.52
MSH6-202ENST00000411819 SMOC2Q9H3U7 446 aa24.55■■□□□ 1.52
MSH6-202ENST00000411819 MYH11P35749 1972 aa24.54■■□□□ 1.52
MSH6-202ENST00000411819 ZNF568Q3ZCX4 644 aa24.54■■□□□ 1.52
MSH6-202ENST00000411819 RTP2Q5QGT7 225 aa24.54■■□□□ 1.52
MSH6-202ENST00000411819 KCNK18Q7Z418 384 aa24.54■■□□□ 1.52
MSH6-202ENST00000411819 DAW1Q8N136 415 aa24.54■■□□□ 1.52
MSH6-202ENST00000411819 MMTAG2Q9BU76 263 aaKnown RBP24.54■■□□□ 1.52
MSH6-202ENST00000411819 KMT5AQ9NQR1 393 aa24.54■■□□□ 1.52
MSH6-202ENST00000411819 FNIP2Q9P278 1114 aa24.54■■□□□ 1.52
MSH6-202ENST00000411819 SMC3Q9UQE7 1217 aa24.54■■□□□ 1.52
MSH6-202ENST00000411819 TNFSF13BQ9Y275 285 aa24.54■■□□□ 1.52
MSH6-202ENST00000411819 VWA3AA6NCI4 1184 aa24.53■■□□□ 1.52
MSH6-202ENST00000411819 TGM5O43548 720 aa24.53■■□□□ 1.52
MSH6-202ENST00000411819 PDGFBP01127 241 aaPredicted RBP24.53■■□□□ 1.52
MSH6-202ENST00000411819 MCM2P49736 904 aa24.53■■□□□ 1.52
MSH6-202ENST00000411819 NAB2Q15742 525 aa24.53■■□□□ 1.52
MSH6-202ENST00000411819 FAM171A1Q5VUB5 890 aa24.53■■□□□ 1.52
MSH6-202ENST00000411819 RINT1Q6NUQ1 792 aa24.53■■□□□ 1.52
MSH6-202ENST00000411819 GPR65Q8IYL9 337 aa24.53■■□□□ 1.52
MSH6-202ENST00000411819 SMG7Q92540 1137 aaKnown RBP24.53■■□□□ 1.52
MSH6-202ENST00000411819 CDK5RAP3Q96JB5 506 aa24.53■■□□□ 1.52
MSH6-202ENST00000411819 TTPALQ9BTX7 342 aa24.53■■□□□ 1.52
MSH6-202ENST00000411819 PLEKHA4Q9H4M7 779 aa24.53■■□□□ 1.52
MSH6-202ENST00000411819 PIDD1Q9HB75 910 aa24.53■■□□□ 1.52
MSH6-202ENST00000411819 VCPP55072 806 aaKnown RBP24.52■■□□□ 1.52
MSH6-202ENST00000411819 RAD51AP2Q09MP3 1159 aa24.52■■□□□ 1.52
MSH6-202ENST00000411819 IER5LQ5T953 404 aa24.52■■□□□ 1.52
MSH6-202ENST00000411819 CEP120Q8N960 986 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms