RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 FOXJ2Q9P0K8 574 aa2.3□□□□□ -2.04
RNU2-55P-201ENST00000411146 USP36Q9P275 1121 aaKnown RBP2.3□□□□□ -2.04
RNU2-55P-201ENST00000411146 ZKSCAN5Q9Y2L8 839 aa2.3□□□□□ -2.04
RNU2-55P-201ENST00000411146 ATRNL1Q5VV63 1379 aa2.3□□□□□ -2.04
RNU2-55P-201ENST00000411146 CGB1A6NKQ9 187 aa2.29□□□□□ -2.04
RNU2-55P-201ENST00000411146 CXorf49A8MYA2 514 aaPredicted RBP2.29□□□□□ -2.04
RNU2-55P-201ENST00000411146 NRP1O14786 923 aa2.29□□□□□ -2.04
RNU2-55P-201ENST00000411146 APPP05067 770 aa2.29□□□□□ -2.04
RNU2-55P-201ENST00000411146 CFIP05156 583 aa2.29□□□□□ -2.04
RNU2-55P-201ENST00000411146 LTA4HP09960 611 aaKnown RBP2.29□□□□□ -2.04
RNU2-55P-201ENST00000411146 HKR1P10072 659 aa2.29□□□□□ -2.04
RNU2-55P-201ENST00000411146 ID4P47928 161 aa2.29□□□□□ -2.04
RNU2-55P-201ENST00000411146 RARRES1P49788 294 aa2.29□□□□□ -2.04
RNU2-55P-201ENST00000411146 KPNA1P52294 538 aaPredicted RBP2.29□□□□□ -2.04
RNU2-55P-201ENST00000411146 TAP1Q03518 808 aa2.29□□□□□ -2.04
RNU2-55P-201ENST00000411146 ZNF169Q14929 603 aaPredicted RBP2.29□□□□□ -2.04
RNU2-55P-201ENST00000411146 AGAP9Q5VTM2 703 aa2.29□□□□□ -2.04
RNU2-55P-201ENST00000411146 BROXQ5VW32 411 aa2.29□□□□□ -2.04
RNU2-55P-201ENST00000411146 IQSEC1Q6DN90 963 aa2.29□□□□□ -2.04
RNU2-55P-201ENST00000411146 DRICH1Q6PGQ1 229 aaPredicted RBP2.29□□□□□ -2.04
RNU2-55P-201ENST00000411146 LMBR1LQ6UX01 489 aa2.29□□□□□ -2.04
RNU2-55P-201ENST00000411146 MED25Q71SY5 747 aa2.29□□□□□ -2.04
RNU2-55P-201ENST00000411146 LRRTM3Q86VH5 581 aa2.29□□□□□ -2.04
RNU2-55P-201ENST00000411146 PLXDC1Q8IUK5 500 aa2.29□□□□□ -2.04
RNU2-55P-201ENST00000411146 SH2D3CQ8N5H7 860 aa2.29□□□□□ -2.04
RNU2-55P-201ENST00000411146 ZNF610Q8N9Z0 462 aa2.29□□□□□ -2.04
RNU2-55P-201ENST00000411146 OR56A1Q8NGH5 318 aa2.29□□□□□ -2.04
RNU2-55P-201ENST00000411146 ARMC5Q96C12 935 aa2.29□□□□□ -2.04
RNU2-55P-201ENST00000411146 RNPC3Q96LT9 517 aaKnown RBP2.29□□□□□ -2.04
RNU2-55P-201ENST00000411146 COQ10AQ96MF6 247 aa2.29□□□□□ -2.04
RNU2-55P-201ENST00000411146 C8orf37Q96NL8 207 aa2.29□□□□□ -2.04
RNU2-55P-201ENST00000411146 CDC5LQ99459 802 aaKnown RBP2.29□□□□□ -2.04
RNU2-55P-201ENST00000411146 TARS2Q9BW92 718 aaKnown RBP2.29□□□□□ -2.04
RNU2-55P-201ENST00000411146 KCTD10Q9H3F6 313 aa2.29□□□□□ -2.04
RNU2-55P-201ENST00000411146 LDAHQ9H6V9 325 aa2.29□□□□□ -2.04
RNU2-55P-201ENST00000411146 TOPORSQ9NS56 1045 aaPredicted RBP2.29□□□□□ -2.04
RNU2-55P-201ENST00000411146 KLHL11Q9NVR0 708 aa2.29□□□□□ -2.04
RNU2-55P-201ENST00000411146 TMEM260Q9NX78 707 aa2.29□□□□□ -2.04
RNU2-55P-201ENST00000411146 GPRC5DQ9NZD1 345 aa2.29□□□□□ -2.04
RNU2-55P-201ENST00000411146 RNF7Q9UBF6 113 aa2.29□□□□□ -2.04
RNU2-55P-201ENST00000411146 USP25Q9UHP3 1055 aa2.29□□□□□ -2.04
RNU2-55P-201ENST00000411146 SIK3Q9Y2K2 1263 aa2.29□□□□□ -2.04
RNU2-55P-201ENST00000411146 INSL6Q9Y581 213 aa2.29□□□□□ -2.04
RNU2-55P-201ENST00000411146 NUMBLQ9Y6R0 609 aa2.29□□□□□ -2.04
RNU2-55P-201ENST00000411146 FPGT-TNNI3KV9GXZ4 949 aa2.29□□□□□ -2.04
RNU2-55P-201ENST00000411146 MAST3O60307 1309 aa2.28□□□□□ -2.04
RNU2-55P-201ENST00000411146 GAGE12BA1L429 117 aa2.28□□□□□ -2.04
RNU2-55P-201ENST00000411146 GAGE12HA6NDE8 117 aa2.28□□□□□ -2.04
RNU2-55P-201ENST00000411146 MYADML2A6NDP7 307 aa2.28□□□□□ -2.04
RNU2-55P-201ENST00000411146 DNAJC9-AS1A6NH13 148 aa2.28□□□□□ -2.04
RNU2-55P-201ENST00000411146 GAS7O60861 476 aa2.28□□□□□ -2.04
RNU2-55P-201ENST00000411146 PPFIA4O75335 1185 aa2.28□□□□□ -2.04
RNU2-55P-201ENST00000411146 RFPL3O75679 317 aa2.28□□□□□ -2.04
RNU2-55P-201ENST00000411146 ERBB2P04626 1255 aa2.28□□□□□ -2.04
RNU2-55P-201ENST00000411146 ELFN1P0C7U0 828 aa2.28□□□□□ -2.04
RNU2-55P-201ENST00000411146 RBP3P10745 1247 aa2.28□□□□□ -2.04
RNU2-55P-201ENST00000411146 ITGB6P18564 788 aa2.28□□□□□ -2.04
RNU2-55P-201ENST00000411146 POU3F2P20265 443 aaPredicted RBP2.28□□□□□ -2.04
RNU2-55P-201ENST00000411146 FPR1P21462 350 aa2.28□□□□□ -2.04
RNU2-55P-201ENST00000411146 ABCG1P45844 678 aa2.28□□□□□ -2.04
RNU2-55P-201ENST00000411146 WNT3AP56704 352 aa2.28□□□□□ -2.04
RNU2-55P-201ENST00000411146 PROK1P58294 105 aa2.28□□□□□ -2.04
RNU2-55P-201ENST00000411146 RAP2BP61225 183 aa2.28□□□□□ -2.04
RNU2-55P-201ENST00000411146 CDK17Q00537 523 aa2.28□□□□□ -2.04
RNU2-55P-201ENST00000411146 OCA2Q04671 838 aa2.28□□□□□ -2.04
RNU2-55P-201ENST00000411146 C19orf54Q5BKX5 351 aa2.28□□□□□ -2.04
RNU2-55P-201ENST00000411146 MAPKAPK5Q8IW41 473 aa2.28□□□□□ -2.04
RNU2-55P-201ENST00000411146 ZZZ3Q8IYH5 903 aa2.28□□□□□ -2.04
RNU2-55P-201ENST00000411146 DDB2Q92466 427 aa2.28□□□□□ -2.04
RNU2-55P-201ENST00000411146 ALOXE3Q9BYJ1 711 aa2.28□□□□□ -2.04
RNU2-55P-201ENST00000411146 KLK15Q9H2R5 256 aa2.28□□□□□ -2.04
RNU2-55P-201ENST00000411146 ZSWIM4Q9H7M6 989 aa2.28□□□□□ -2.04
RNU2-55P-201ENST00000411146 VTA1Q9NP79 307 aa2.28□□□□□ -2.04
RNU2-55P-201ENST00000411146 ASB6Q9NWX5 421 aa2.28□□□□□ -2.04
RNU2-55P-201ENST00000411146 RNF181Q9P0P0 153 aa2.28□□□□□ -2.04
RNU2-55P-201ENST00000411146 MAGEC2Q9UBF1 373 aaPredicted RBP2.28□□□□□ -2.04
RNU2-55P-201ENST00000411146 TLK1Q9UKI8 766 aa2.28□□□□□ -2.04
RNU2-55P-201ENST00000411146 CDY2AQ9Y6F7 541 aa2.28□□□□□ -2.04
RNU2-55P-201ENST00000411146 CACNA1IQ9P0X4 2223 aa2.27□□□□□ -2.05
RNU2-55P-201ENST00000411146 KDM1AO60341 852 aa2.27□□□□□ -2.05
RNU2-55P-201ENST00000411146 CDKL5O76039 1030 aa2.27□□□□□ -2.05
RNU2-55P-201ENST00000411146 FKBP9O95302 570 aa2.27□□□□□ -2.05
RNU2-55P-201ENST00000411146 ALOX15P16050 662 aaPredicted RBP2.27□□□□□ -2.05
RNU2-55P-201ENST00000411146 FGFR4P22455 802 aa2.27□□□□□ -2.05
RNU2-55P-201ENST00000411146 XPAP23025 273 aaPredicted RBP2.27□□□□□ -2.05
RNU2-55P-201ENST00000411146 LSP1P33241 339 aa2.27□□□□□ -2.05
RNU2-55P-201ENST00000411146 PTPN7P35236 360 aa2.27□□□□□ -2.05
RNU2-55P-201ENST00000411146 FLT3P36888 993 aa2.27□□□□□ -2.05
RNU2-55P-201ENST00000411146 PHC1P78364 1004 aa2.27□□□□□ -2.05
RNU2-55P-201ENST00000411146 HSD11B2P80365 405 aa2.27□□□□□ -2.05
RNU2-55P-201ENST00000411146 MPP3Q13368 585 aa2.27□□□□□ -2.05
RNU2-55P-201ENST00000411146 CCDC144BQ3MJ40 725 aa2.27□□□□□ -2.05
RNU2-55P-201ENST00000411146 FAM47AQ5JRC9 791 aa2.27□□□□□ -2.05
RNU2-55P-201ENST00000411146 ATXN7L2Q5T6C5 722 aaPredicted RBP2.27□□□□□ -2.05
RNU2-55P-201ENST00000411146 ABHD17BQ5VST6 288 aa2.27□□□□□ -2.05
RNU2-55P-201ENST00000411146 Q6ZNX1 250 aa2.27□□□□□ -2.05
RNU2-55P-201ENST00000411146 FKBP9P1Q75LS8 142 aa2.27□□□□□ -2.05
RNU2-55P-201ENST00000411146 BHLHA9Q7RTU4 235 aa2.27□□□□□ -2.05
RNU2-55P-201ENST00000411146 KIF18BQ86Y91 864 aa2.27□□□□□ -2.05
RNU2-55P-201ENST00000411146 SRRM1Q8IYB3 904 aaKnown RBP2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms