RNA–Protein interactions for RNA: ENST00000407622.2

COL23A1-202, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL23A1, Length 2,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-202ENST00000407622 SIX1Q15475 284 aaPredicted RBP17.78■□□□□ 0.44
COL23A1-202ENST00000407622 SEL1L2Q5TEA6 688 aa17.78■□□□□ 0.44
COL23A1-202ENST00000407622 OTUD6BQ8N6M0 293 aa17.78■□□□□ 0.44
COL23A1-202ENST00000407622 TATDN2Q93075 761 aa17.78■□□□□ 0.44
COL23A1-202ENST00000407622 RMDN3Q96TC7 470 aa17.78■□□□□ 0.44
COL23A1-202ENST00000407622 PI4K2AQ9BTU6 479 aa17.78■□□□□ 0.44
COL23A1-202ENST00000407622 PABPC3Q9H361 631 aaKnown RBP17.78■□□□□ 0.44
COL23A1-202ENST00000407622 SEMA4AQ9H3S1 761 aa17.78■□□□□ 0.44
COL23A1-202ENST00000407622 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.78■□□□□ 0.44
COL23A1-202ENST00000407622 PCYOX1Q9UHG3 505 aa17.78■□□□□ 0.44
COL23A1-202ENST00000407622 USP20Q9Y2K6 914 aa17.78■□□□□ 0.44
COL23A1-202ENST00000407622 PTPN22Q9Y2R2 807 aa17.78■□□□□ 0.44
COL23A1-202ENST00000407622 PMM2O15305 246 aa17.78■□□□□ 0.44
COL23A1-202ENST00000407622 SPOPO43791 374 aa17.78■□□□□ 0.44
COL23A1-202ENST00000407622 EGFRP00533 1210 aa17.78■□□□□ 0.44
COL23A1-202ENST00000407622 CYP1A2P05177 515 aa17.78■□□□□ 0.44
COL23A1-202ENST00000407622 RARAP10276 462 aa17.78■□□□□ 0.44
COL23A1-202ENST00000407622 MFAP3P55082 362 aa17.78■□□□□ 0.44
COL23A1-202ENST00000407622 KRT39Q6A163 491 aa17.78■□□□□ 0.44
COL23A1-202ENST00000407622 MAP4K3Q8IVH8 894 aa17.78■□□□□ 0.44
COL23A1-202ENST00000407622 MTMR14Q8NCE2 650 aa17.78■□□□□ 0.44
COL23A1-202ENST00000407622 DDX1Q92499 740 aaKnown RBP17.78■□□□□ 0.44
COL23A1-202ENST00000407622 VTI1AQ96AJ9 217 aa17.78■□□□□ 0.44
COL23A1-202ENST00000407622 PDCD2LQ9BRP1 358 aa17.78■□□□□ 0.44
COL23A1-202ENST00000407622 CAPN7Q9Y6W3 813 aa17.78■□□□□ 0.44
COL23A1-202ENST00000407622 ADGRA3Q8IWK6 1321 aa17.78■□□□□ 0.44
COL23A1-202ENST00000407622 SRRM3A6NNA2 597 aaPredicted RBP17.77■□□□□ 0.44
COL23A1-202ENST00000407622 KIAA0754O94854 1291 aa17.77■□□□□ 0.44
COL23A1-202ENST00000407622 NUDT17P0C025 328 aa17.77■□□□□ 0.44
COL23A1-202ENST00000407622 FNTAP49354 379 aa17.77■□□□□ 0.44
COL23A1-202ENST00000407622 SLC29A2Q14542 456 aa17.77■□□□□ 0.44
COL23A1-202ENST00000407622 ZBED3Q96IU2 234 aaPredicted RBP17.77■□□□□ 0.44
COL23A1-202ENST00000407622 TRIM7Q9C029 511 aa17.77■□□□□ 0.44
COL23A1-202ENST00000407622 WNT8AQ9H1J5 351 aa17.77■□□□□ 0.44
COL23A1-202ENST00000407622 PXMP2Q9NR77 195 aa17.77■□□□□ 0.44
COL23A1-202ENST00000407622 DDX20Q9UHI6 824 aaKnown RBP17.77■□□□□ 0.44
COL23A1-202ENST00000407622 RASAL2Q9UJF2 1139 aa17.77■□□□□ 0.44
COL23A1-202ENST00000407622 DOCK5Q9H7D0 1870 aa17.77■□□□□ 0.44
COL23A1-202ENST00000407622 WDR64B1ANS9 1081 aa17.77■□□□□ 0.43
COL23A1-202ENST00000407622 GRIN3BO60391 1043 aa17.77■□□□□ 0.43
COL23A1-202ENST00000407622 FGFR4P22455 802 aa17.77■□□□□ 0.43
COL23A1-202ENST00000407622 DRG2P55039 364 aaKnown RBP17.77■□□□□ 0.43
COL23A1-202ENST00000407622 RNF187Q5TA31 235 aaPredicted RBP17.77■□□□□ 0.43
COL23A1-202ENST00000407622 C6orf89Q6UWU4 347 aa17.77■□□□□ 0.43
COL23A1-202ENST00000407622 SLC13A5Q86YT5 568 aaPredicted RBP17.77■□□□□ 0.43
COL23A1-202ENST00000407622 TMEM8AQ9HCN3 771 aa17.77■□□□□ 0.43
COL23A1-202ENST00000407622 COQ4Q9Y3A0 265 aa17.77■□□□□ 0.43
COL23A1-202ENST00000407622 RIPK3Q9Y572 518 aa17.77■□□□□ 0.43
COL23A1-202ENST00000407622 TLDC2A0PJX2 215 aa17.76■□□□□ 0.43
COL23A1-202ENST00000407622 ZNF862O60290 1169 aa17.76■□□□□ 0.43
COL23A1-202ENST00000407622 PAEPP09466 180 aa17.76■□□□□ 0.43
COL23A1-202ENST00000407622 DLATP10515 647 aaKnown RBP17.76■□□□□ 0.43
COL23A1-202ENST00000407622 COILP38432 576 aaPredicted RBP17.76■□□□□ 0.43
COL23A1-202ENST00000407622 GPC3P51654 580 aa17.76■□□□□ 0.43
COL23A1-202ENST00000407622 EIF3BP55884 814 aaKnown RBP17.76■□□□□ 0.43
COL23A1-202ENST00000407622 CDR2Q01850 454 aa17.76■□□□□ 0.43
COL23A1-202ENST00000407622 BYSLQ13895 437 aaKnown RBP17.76■□□□□ 0.43
COL23A1-202ENST00000407622 SPRED3Q2MJR0 410 aa17.76■□□□□ 0.43
COL23A1-202ENST00000407622 SPDYCQ5MJ68 293 aa17.76■□□□□ 0.43
COL23A1-202ENST00000407622 PHLDB2Q86SQ0 1253 aa17.76■□□□□ 0.43
COL23A1-202ENST00000407622 GTF3C4Q9UKN8 822 aa17.76■□□□□ 0.43
COL23A1-202ENST00000407622 HSPA6P17066 643 aa17.76■□□□□ 0.43
COL23A1-202ENST00000407622 PDE6CP51160 858 aa17.76■□□□□ 0.43
COL23A1-202ENST00000407622 MCCD1P59942 119 aaPredicted RBP17.76■□□□□ 0.43
COL23A1-202ENST00000407622 DMP1Q13316 513 aaPredicted RBP17.76■□□□□ 0.43
COL23A1-202ENST00000407622 DENND2CQ68D51 928 aa17.76■□□□□ 0.43
COL23A1-202ENST00000407622 LLGL2Q6P1M3 1020 aa17.76■□□□□ 0.43
COL23A1-202ENST00000407622 SV2AQ7L0J3 742 aa17.76■□□□□ 0.43
COL23A1-202ENST00000407622 SPATS2Q86XZ4 545 aaKnown RBP17.76■□□□□ 0.43
COL23A1-202ENST00000407622 CCDC105Q8IYK2 499 aa17.76■□□□□ 0.43
COL23A1-202ENST00000407622 FHDC1Q9C0D6 1143 aaPredicted RBP17.76■□□□□ 0.43
COL23A1-202ENST00000407622 AZI2Q9H6S1 392 aa17.76■□□□□ 0.43
COL23A1-202ENST00000407622 KMT5AQ9NQR1 393 aa17.76■□□□□ 0.43
COL23A1-202ENST00000407622 RAB20Q9NX57 234 aa17.76■□□□□ 0.43
COL23A1-202ENST00000407622 TCEAL9Q9UHQ7 104 aa17.76■□□□□ 0.43
COL23A1-202ENST00000407622 KIAA1217Q5T5P2 1943 aa17.75■□□□□ 0.43
COL23A1-202ENST00000407622 FZD9O00144 591 aa17.75■□□□□ 0.43
COL23A1-202ENST00000407622 CLDN3O15551 220 aa17.75■□□□□ 0.43
COL23A1-202ENST00000407622 SORBS3O60504 671 aa17.75■□□□□ 0.43
COL23A1-202ENST00000407622 JAK3P52333 1124 aa17.75■□□□□ 0.43
COL23A1-202ENST00000407622 SNRPFP62306 86 aaKnown RBP17.75■□□□□ 0.43
COL23A1-202ENST00000407622 IFI35P80217 286 aaPredicted RBP17.75■□□□□ 0.43
COL23A1-202ENST00000407622 MTMR2Q13614 643 aa17.75■□□□□ 0.43
COL23A1-202ENST00000407622 CLUL1Q15846 466 aa17.75■□□□□ 0.43
COL23A1-202ENST00000407622 CYP1B1Q16678 543 aa17.75■□□□□ 0.43
COL23A1-202ENST00000407622 KCNV1Q6PIU1 500 aa17.75■□□□□ 0.43
COL23A1-202ENST00000407622 RNF207Q6ZRF8 634 aa17.75■□□□□ 0.43
COL23A1-202ENST00000407622 FBXL13Q8NEE6 735 aa17.75■□□□□ 0.43
COL23A1-202ENST00000407622 PSPC1Q8WXF1 523 aaKnown RBP17.75■□□□□ 0.43
COL23A1-202ENST00000407622 TEPSINQ96N21 525 aa17.75■□□□□ 0.43
COL23A1-202ENST00000407622 NT5C1BQ96P26 610 aa17.75■□□□□ 0.43
COL23A1-202ENST00000407622 IWS1Q96ST2 819 aa17.75■□□□□ 0.43
COL23A1-202ENST00000407622 TIPINQ9BVW5 301 aa17.75■□□□□ 0.43
COL23A1-202ENST00000407622 KIAA1683Q9H0B3 1180 aa17.75■□□□□ 0.43
COL23A1-202ENST00000407622 CYP24A1Q07973 514 aa17.75■□□□□ 0.43
COL23A1-202ENST00000407622 C2CD6Q53TS8 623 aa17.75■□□□□ 0.43
COL23A1-202ENST00000407622 ARHGEF16Q5VV41 709 aa17.75■□□□□ 0.43
COL23A1-202ENST00000407622 LMBRD2Q68DH5 695 aaPredicted RBP17.75■□□□□ 0.43
COL23A1-202ENST00000407622 MICALCLQ6ZW33 695 aa17.75■□□□□ 0.43
COL23A1-202ENST00000407622 YTHDF3Q7Z739 585 aaKnown RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms