RNA–Protein interactions for RNA: ENST00000405493.6

RAPGEF3-204, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 5,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-204ENST00000405493 TMEM143Q96AN5 459 aa12.5□□□□□ -0.41
RAPGEF3-204ENST00000405493 TRIM56Q9BRZ2 755 aaKnown RBP12.5□□□□□ -0.41
RAPGEF3-204ENST00000405493 CALN1Q9BXU9 219 aa12.5□□□□□ -0.41
RAPGEF3-204ENST00000405493 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.5□□□□□ -0.41
RAPGEF3-204ENST00000405493 SUN1O94901 812 aa12.5□□□□□ -0.41
RAPGEF3-204ENST00000405493 CPP00450 1065 aa12.5□□□□□ -0.41
RAPGEF3-204ENST00000405493 URODP06132 367 aa12.5□□□□□ -0.41
RAPGEF3-204ENST00000405493 PGK2P07205 417 aa12.5□□□□□ -0.41
RAPGEF3-204ENST00000405493 ADORA2AP29274 412 aa12.5□□□□□ -0.41
RAPGEF3-204ENST00000405493 GRIK1P39086 918 aa12.5□□□□□ -0.41
RAPGEF3-204ENST00000405493 TMEM132BQ14DG7 1078 aa12.5□□□□□ -0.41
RAPGEF3-204ENST00000405493 KIAA1755Q5JYT7 1200 aa12.5□□□□□ -0.41
RAPGEF3-204ENST00000405493 GBP5Q96PP8 586 aa12.5□□□□□ -0.41
RAPGEF3-204ENST00000405493 PCDHB8Q9UN66 801 aa12.5□□□□□ -0.41
RAPGEF3-204ENST00000405493 IGSF9BQ9UPX0 1349 aa12.5□□□□□ -0.41
RAPGEF3-204ENST00000405493 PRCPP42785 496 aa12.5□□□□□ -0.41
RAPGEF3-204ENST00000405493 BASP1P80723 227 aaKnown RBP12.5□□□□□ -0.41
RAPGEF3-204ENST00000405493 CDK17Q00537 523 aa12.5□□□□□ -0.41
RAPGEF3-204ENST00000405493 APOBEC3HQ6NTF7 200 aaKnown RBP12.5□□□□□ -0.41
RAPGEF3-204ENST00000405493 RWDD4Q6NW29 188 aaKnown RBP12.5□□□□□ -0.41
RAPGEF3-204ENST00000405493 C3orf67Q6ZVT6 689 aa12.5□□□□□ -0.41
RAPGEF3-204ENST00000405493 WNK4Q96J92 1243 aa12.5□□□□□ -0.41
RAPGEF3-204ENST00000405493 VWA5AO00534 786 aa12.5□□□□□ -0.41
RAPGEF3-204ENST00000405493 PDXKO00764 312 aa12.5□□□□□ -0.41
RAPGEF3-204ENST00000405493 SDC4P31431 198 aa12.5□□□□□ -0.41
RAPGEF3-204ENST00000405493 PDE1BQ01064 536 aa12.5□□□□□ -0.41
RAPGEF3-204ENST00000405493 COL14A1Q05707 1796 aaKnown RBP12.5□□□□□ -0.41
RAPGEF3-204ENST00000405493 IQCB1Q15051 598 aa12.5□□□□□ -0.41
RAPGEF3-204ENST00000405493 PCNX4Q63HM2 1172 aa12.5□□□□□ -0.41
RAPGEF3-204ENST00000405493 ARHGEF18Q6ZSZ5 1173 aa12.5□□□□□ -0.41
RAPGEF3-204ENST00000405493 GDAP1Q8TB36 358 aa12.5□□□□□ -0.41
RAPGEF3-204ENST00000405493 MIPOL1Q8TD10 442 aa12.5□□□□□ -0.41
RAPGEF3-204ENST00000405493 ZNF668Q96K58 619 aaPredicted RBP12.5□□□□□ -0.41
RAPGEF3-204ENST00000405493 UBQLN1Q9UMX0 589 aaKnown RBP12.5□□□□□ -0.41
RAPGEF3-204ENST00000405493 CASQ2O14958 399 aaPredicted RBP12.5□□□□□ -0.41
RAPGEF3-204ENST00000405493 NLRP11P59045 1033 aaKnown RBP12.5□□□□□ -0.41
RAPGEF3-204ENST00000405493 IL9RQ01113 521 aa12.5□□□□□ -0.41
RAPGEF3-204ENST00000405493 TFDP2Q14188 446 aa12.5□□□□□ -0.41
RAPGEF3-204ENST00000405493 E4F1Q66K89 784 aaPredicted RBP12.5□□□□□ -0.41
RAPGEF3-204ENST00000405493 RHOT2Q8IXI1 618 aa12.5□□□□□ -0.41
RAPGEF3-204ENST00000405493 WHAMMQ8TF30 809 aa12.5□□□□□ -0.41
RAPGEF3-204ENST00000405493 WDR18Q9BV38 432 aa12.5□□□□□ -0.41
RAPGEF3-204ENST00000405493 MRPL9Q9BYD2 267 aaKnown RBP12.5□□□□□ -0.41
RAPGEF3-204ENST00000405493 POLD4Q9HCU8 107 aa12.5□□□□□ -0.41
RAPGEF3-204ENST00000405493 CHUKO15111 745 aa12.49□□□□□ -0.41
RAPGEF3-204ENST00000405493 BNIP3LO60238 219 aa12.49□□□□□ -0.41
RAPGEF3-204ENST00000405493 DHX9Q08211 1270 aaKnown RBP12.49□□□□□ -0.41
RAPGEF3-204ENST00000405493 KRT33BQ14525 404 aa12.49□□□□□ -0.41
RAPGEF3-204ENST00000405493 CYP4A22Q5TCH4 519 aa12.49□□□□□ -0.41
RAPGEF3-204ENST00000405493 ARHGAP18Q8N392 663 aa12.49□□□□□ -0.41
RAPGEF3-204ENST00000405493 DAGLBQ8NCG7 672 aa12.49□□□□□ -0.41
RAPGEF3-204ENST00000405493 CAPNS2Q96L46 248 aa12.49□□□□□ -0.41
RAPGEF3-204ENST00000405493 APBA2Q99767 749 aa12.49□□□□□ -0.41
RAPGEF3-204ENST00000405493 POLR3CQ9BUI4 534 aaPredicted RBP12.49□□□□□ -0.41
RAPGEF3-204ENST00000405493 ENTPD7Q9NQZ7 604 aa12.49□□□□□ -0.41
RAPGEF3-204ENST00000405493 FAM8A1Q9UBU6 413 aa12.49□□□□□ -0.41
RAPGEF3-204ENST00000405493 DR1Q01658 176 aa12.49□□□□□ -0.41
RAPGEF3-204ENST00000405493 DRP2Q13474 957 aa12.49□□□□□ -0.41
RAPGEF3-204ENST00000405493 PHLDB3Q6NSJ2 640 aa12.49□□□□□ -0.41
RAPGEF3-204ENST00000405493 SRLQ86TD4 932 aa12.49□□□□□ -0.41
RAPGEF3-204ENST00000405493 N4BP2L2Q92802 583 aaPredicted RBP12.49□□□□□ -0.41
RAPGEF3-204ENST00000405493 CFAP36Q96G28 342 aa12.49□□□□□ -0.41
RAPGEF3-204ENST00000405493 ZWILCHQ9H900 591 aa12.49□□□□□ -0.41
RAPGEF3-204ENST00000405493 LRRD1A4D1F6 860 aa12.49□□□□□ -0.41
RAPGEF3-204ENST00000405493 ANKRD23Q86SG2 305 aa12.49□□□□□ -0.41
RAPGEF3-204ENST00000405493 FBXO16Q8IX29 292 aaPredicted RBP12.49□□□□□ -0.41
RAPGEF3-204ENST00000405493 HSPH1Q92598 858 aa12.49□□□□□ -0.41
RAPGEF3-204ENST00000405493 NGRNQ9NPE2 291 aaKnown RBP12.49□□□□□ -0.41
RAPGEF3-204ENST00000405493 ADAM22Q9P0K1 906 aa12.49□□□□□ -0.41
RAPGEF3-204ENST00000405493 DNAJC12Q9UKB3 198 aa12.49□□□□□ -0.41
RAPGEF3-204ENST00000405493 AGAP1Q9UPQ3 857 aa12.49□□□□□ -0.41
RAPGEF3-204ENST00000405493 HMGB1P1B2RPK0 211 aaPredicted RBP12.49□□□□□ -0.41
RAPGEF3-204ENST00000405493 EGFRP00533 1210 aa12.49□□□□□ -0.41
RAPGEF3-204ENST00000405493 SLCO1A2P46721 670 aa12.49□□□□□ -0.41
RAPGEF3-204ENST00000405493 TMEM270Q6UE05 265 aa12.49□□□□□ -0.41
RAPGEF3-204ENST00000405493 FBXL13Q8NEE6 735 aa12.49□□□□□ -0.41
RAPGEF3-204ENST00000405493 ABHD10Q9NUJ1 306 aa12.49□□□□□ -0.41
RAPGEF3-204ENST00000405493 TJP2Q9UDY2 1190 aa12.49□□□□□ -0.41
RAPGEF3-204ENST00000405493 ADAMTS1Q9UHI8 967 aa12.49□□□□□ -0.41
RAPGEF3-204ENST00000405493 PP2D1A8MPX8 630 aa12.49□□□□□ -0.41
RAPGEF3-204ENST00000405493 M0QYV0 167 aa12.49□□□□□ -0.41
RAPGEF3-204ENST00000405493 ZBTB22O15209 634 aa12.49□□□□□ -0.41
RAPGEF3-204ENST00000405493 PQBP1O60828 265 aaKnown RBP12.49□□□□□ -0.41
RAPGEF3-204ENST00000405493 PSMA2P25787 234 aa12.49□□□□□ -0.41
RAPGEF3-204ENST00000405493 GCLMP48507 274 aa12.49□□□□□ -0.41
RAPGEF3-204ENST00000405493 FAM50BQ9Y247 325 aa12.49□□□□□ -0.41
RAPGEF3-204ENST00000405493 MSH2P43246 934 aa12.48□□□□□ -0.41
RAPGEF3-204ENST00000405493 RIOX2Q8IUF8 465 aa12.48□□□□□ -0.41
RAPGEF3-204ENST00000405493 SLC4A9Q96Q91 983 aa12.48□□□□□ -0.41
RAPGEF3-204ENST00000405493 CNOT10Q9H9A5 744 aaKnown RBP12.48□□□□□ -0.41
RAPGEF3-204ENST00000405493 RGL1Q9NZL6 768 aa12.48□□□□□ -0.41
RAPGEF3-204ENST00000405493 CEP72Q9P209 647 aa12.48□□□□□ -0.41
RAPGEF3-204ENST00000405493 BCAP29Q9UHQ4 241 aa12.48□□□□□ -0.41
RAPGEF3-204ENST00000405493 ADGRG1Q9Y653 693 aa12.48□□□□□ -0.41
RAPGEF3-204ENST00000405493 POLR1AO95602 1720 aaPredicted RBP12.48□□□□□ -0.41
RAPGEF3-204ENST00000405493 RBBP5Q15291 538 aaKnown RBP12.48□□□□□ -0.41
RAPGEF3-204ENST00000405493 SGSM1Q2NKQ1 1148 aa12.48□□□□□ -0.41
RAPGEF3-204ENST00000405493 TLK2Q86UE8 772 aa12.48□□□□□ -0.41
RAPGEF3-204ENST00000405493 HDAC11Q96DB2 347 aa12.48□□□□□ -0.41
RAPGEF3-204ENST00000405493 TBK1Q9UHD2 729 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms