RNA–Protein interactions for RNA: ENST00000404914.7

ATG4B-205, Transcript of autophagy related 4B cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4B, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-205ENST00000404914 MSH4O15457 936 aa16.62■□□□□ 0.25
ATG4B-205ENST00000404914 SGPL1O95470 568 aa16.62■□□□□ 0.25
ATG4B-205ENST00000404914 MFSD14BQ5SR56 506 aa16.62■□□□□ 0.25
ATG4B-205ENST00000404914 TRMT10CQ7L0Y3 403 aaKnown RBP16.62■□□□□ 0.25
ATG4B-205ENST00000404914 ZNF804AQ7Z570 1209 aa16.62■□□□□ 0.25
ATG4B-205ENST00000404914 KIAA0825Q8IV33 1275 aa16.62■□□□□ 0.25
ATG4B-205ENST00000404914 SLFN12Q8IYM2 578 aa16.62■□□□□ 0.25
ATG4B-205ENST00000404914 SUPT20HQ8NEM7 779 aa16.62■□□□□ 0.25
ATG4B-205ENST00000404914 EIF2AK1Q9BQI3 630 aaKnown RBP16.62■□□□□ 0.25
ATG4B-205ENST00000404914 SLCO1B3Q9NPD5 702 aa16.62■□□□□ 0.25
ATG4B-205ENST00000404914 ZFATQ9P243 1243 aa16.62■□□□□ 0.25
ATG4B-205ENST00000404914 VAV3Q9UKW4 847 aa16.62■□□□□ 0.25
ATG4B-205ENST00000404914 CHKBQ9Y259 395 aa16.62■□□□□ 0.25
ATG4B-205ENST00000404914 RABGAP1Q9Y3P9 1069 aa16.62■□□□□ 0.25
ATG4B-205ENST00000404914 H0Y3Z8 333 aa16.61■□□□□ 0.25
ATG4B-205ENST00000404914 ECEL1O95672 775 aa16.61■□□□□ 0.25
ATG4B-205ENST00000404914 PDHA1P08559 390 aa16.61■□□□□ 0.25
ATG4B-205ENST00000404914 CCNG1P51959 295 aa16.61■□□□□ 0.25
ATG4B-205ENST00000404914 HADHBP55084 474 aaKnown RBP16.61■□□□□ 0.25
ATG4B-205ENST00000404914 CALCOCO2Q13137 446 aa16.61■□□□□ 0.25
ATG4B-205ENST00000404914 TTC8Q8TAM2 541 aa16.61■□□□□ 0.25
ATG4B-205ENST00000404914 ERP27Q96DN0 273 aa16.61■□□□□ 0.25
ATG4B-205ENST00000404914 RUNDC3BQ96NL0 473 aa16.61■□□□□ 0.25
ATG4B-205ENST00000404914 KLHL14Q9P2G3 628 aa16.61■□□□□ 0.25
ATG4B-205ENST00000404914 NAALADL1Q9UQQ1 740 aa16.61■□□□□ 0.25
ATG4B-205ENST00000404914 MPHOSPH10O00566 681 aaKnown RBP16.61■□□□□ 0.25
ATG4B-205ENST00000404914 GPC5P78333 572 aa16.61■□□□□ 0.25
ATG4B-205ENST00000404914 GPSM2P81274 684 aa16.61■□□□□ 0.25
ATG4B-205ENST00000404914 MTFR1Q15390 333 aa16.61■□□□□ 0.25
ATG4B-205ENST00000404914 CYFIP1Q7L576 1253 aa16.61■□□□□ 0.25
ATG4B-205ENST00000404914 CROCCP2Q86T23 111 aa16.61■□□□□ 0.25
ATG4B-205ENST00000404914 PAIP2Q9BPZ3 127 aaKnown RBP16.61■□□□□ 0.25
ATG4B-205ENST00000404914 PIDD1Q9HB75 910 aa16.61■□□□□ 0.25
ATG4B-205ENST00000404914 AGPAT3Q9NRZ7 376 aa16.61■□□□□ 0.25
ATG4B-205ENST00000404914 NINJ2Q9NZG7 142 aa16.61■□□□□ 0.25
ATG4B-205ENST00000404914 ASIC3Q9UHC3 531 aa16.61■□□□□ 0.25
ATG4B-205ENST00000404914 ZNFX1Q9P2E3 1918 aaKnown RBP16.6■□□□□ 0.25
ATG4B-205ENST00000404914 FAM196BA6NMK8 535 aa16.6■□□□□ 0.25
ATG4B-205ENST00000404914 KIF3CO14782 793 aa16.6■□□□□ 0.25
ATG4B-205ENST00000404914 SPAG7O75391 227 aa16.6■□□□□ 0.25
ATG4B-205ENST00000404914 TTC4O95801 387 aa16.6■□□□□ 0.25
ATG4B-205ENST00000404914 CALCAP01258 141 aa16.6■□□□□ 0.25
ATG4B-205ENST00000404914 HSPA6P17066 643 aa16.6■□□□□ 0.25
ATG4B-205ENST00000404914 ATP4AP20648 1035 aa16.6■□□□□ 0.25
ATG4B-205ENST00000404914 ITGA8P53708 1063 aa16.6■□□□□ 0.25
ATG4B-205ENST00000404914 RAD23BP54727 409 aa16.6■□□□□ 0.25
ATG4B-205ENST00000404914 RNF43Q68DV7 783 aa16.6■□□□□ 0.25
ATG4B-205ENST00000404914 FAM13CQ8NE31 585 aa16.6■□□□□ 0.25
ATG4B-205ENST00000404914 LBHD1Q9BQE6 289 aaPredicted RBP16.6■□□□□ 0.25
ATG4B-205ENST00000404914 OLFML3Q9NRN5 406 aa16.6■□□□□ 0.25
ATG4B-205ENST00000404914 SPATS2LQ9NUQ6 558 aaKnown RBP16.6■□□□□ 0.25
ATG4B-205ENST00000404914 SPOPO43791 374 aa16.6■□□□□ 0.25
ATG4B-205ENST00000404914 AP1G2O75843 785 aa16.6■□□□□ 0.25
ATG4B-205ENST00000404914 FAM13AO94988 1023 aa16.6■□□□□ 0.25
ATG4B-205ENST00000404914 HOXA13P31271 388 aaPredicted RBP16.6■□□□□ 0.25
ATG4B-205ENST00000404914 SHMT1P34896 483 aa16.6■□□□□ 0.25
ATG4B-205ENST00000404914 DNAJC3Q13217 504 aa16.6■□□□□ 0.25
ATG4B-205ENST00000404914 R3HDM1Q15032 1099 aaKnown RBP16.6■□□□□ 0.25
ATG4B-205ENST00000404914 USH1GQ495M9 461 aa16.6■□□□□ 0.25
ATG4B-205ENST00000404914 DAB2IPQ5VWQ8 1189 aa16.6■□□□□ 0.25
ATG4B-205ENST00000404914 NOP9Q86U38 636 aaKnown RBP16.6■□□□□ 0.25
ATG4B-205ENST00000404914 C7orf43Q8WVR3 580 aa16.6■□□□□ 0.25
ATG4B-205ENST00000404914 C9orf72Q96LT7 481 aa16.6■□□□□ 0.25
ATG4B-205ENST00000404914 ADAM33Q9BZ11 813 aa16.6■□□□□ 0.25
ATG4B-205ENST00000404914 TRIM7Q9C029 511 aa16.6■□□□□ 0.25
ATG4B-205ENST00000404914 DAGLAQ9Y4D2 1042 aa16.6■□□□□ 0.25
ATG4B-205ENST00000404914 NUMBLQ9Y6R0 609 aa16.6■□□□□ 0.25
ATG4B-205ENST00000404914 MYH11P35749 1972 aa16.6■□□□□ 0.25
ATG4B-205ENST00000404914 POLRMTO00411 1230 aaKnown RBP16.6■□□□□ 0.25
ATG4B-205ENST00000404914 CHMP2AO43633 222 aa16.6■□□□□ 0.25
ATG4B-205ENST00000404914 T-ENOLP0DO92 83 aa16.6■□□□□ 0.25
ATG4B-205ENST00000404914 PPP3CAQ08209 521 aa16.6■□□□□ 0.25
ATG4B-205ENST00000404914 ZNF449Q6P9G9 518 aa16.6■□□□□ 0.25
ATG4B-205ENST00000404914 ERMNQ8TAM6 284 aa16.6■□□□□ 0.25
ATG4B-205ENST00000404914 MAGEB18Q96M61 343 aa16.6■□□□□ 0.25
ATG4B-205ENST00000404914 KIAA1683Q9H0B3 1180 aa16.6■□□□□ 0.25
ATG4B-205ENST00000404914 PCIF1Q9H4Z3 704 aa16.6■□□□□ 0.25
ATG4B-205ENST00000404914 RNPEPL1Q9HAU8 725 aa16.6■□□□□ 0.25
ATG4B-205ENST00000404914 GRID1Q9ULK0 1009 aa16.6■□□□□ 0.25
ATG4B-205ENST00000404914 EYA4O95677 639 aa16.59■□□□□ 0.25
ATG4B-205ENST00000404914 TPBGLP0DKB5 382 aa16.59■□□□□ 0.25
ATG4B-205ENST00000404914 EPHB2P29323 1055 aa16.59■□□□□ 0.25
ATG4B-205ENST00000404914 GBP1P32455 592 aa16.59■□□□□ 0.25
ATG4B-205ENST00000404914 CTCFP49711 727 aaPredicted RBP16.59■□□□□ 0.25
ATG4B-205ENST00000404914 PSPC1Q8WXF1 523 aaKnown RBP16.59■□□□□ 0.25
ATG4B-205ENST00000404914 RPS6KC1Q96S38 1066 aa16.59■□□□□ 0.25
ATG4B-205ENST00000404914 SYT15Q9BQS2 421 aa16.59■□□□□ 0.25
ATG4B-205ENST00000404914 NUP85Q9BW27 656 aa16.59■□□□□ 0.25
ATG4B-205ENST00000404914 TAOK3Q9H2K8 898 aa16.59■□□□□ 0.25
ATG4B-205ENST00000404914 R3HDM2Q9Y2K5 976 aaKnown RBP16.59■□□□□ 0.25
ATG4B-205ENST00000404914 ENTPD5O75356 428 aa16.59■□□□□ 0.25
ATG4B-205ENST00000404914 CBX6O95503 412 aa16.59■□□□□ 0.25
ATG4B-205ENST00000404914 SARNPP82979 210 aaKnown RBP16.59■□□□□ 0.25
ATG4B-205ENST00000404914 TPH2Q8IWU9 490 aa16.59■□□□□ 0.25
ATG4B-205ENST00000404914 FLAD1Q8NFF5 587 aa16.59■□□□□ 0.25
ATG4B-205ENST00000404914 SLC7A6OSQ96CW6 309 aaPredicted RBP16.59■□□□□ 0.25
ATG4B-205ENST00000404914 PITPNM3Q9BZ71 974 aa16.59■□□□□ 0.25
ATG4B-205ENST00000404914 NYXQ9GZU5 481 aa16.59■□□□□ 0.25
ATG4B-205ENST00000404914 DMAC2Q9NW81 257 aa16.59■□□□□ 0.25
ATG4B-205ENST00000404914 WRAP73Q9P2S5 460 aaPredicted RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms