RNA–Protein interactions for RNA: ENST00000404816.6

LTBP1-203, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene LTBP1, Length 6,333 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-203ENST00000404816 CAAP1Q9H8G2 361 aa19.18■□□□□ 0.66
LTBP1-203ENST00000404816 CHORDC1Q9UHD1 332 aaPredicted RBP19.18■□□□□ 0.66
LTBP1-203ENST00000404816 ATP9BO43861 1147 aa19.18■□□□□ 0.66
LTBP1-203ENST00000404816 PAMP19021 973 aa19.18■□□□□ 0.66
LTBP1-203ENST00000404816 DHX34Q14147 1143 aaKnown RBP19.18■□□□□ 0.66
LTBP1-203ENST00000404816 LRIG3Q6UXM1 1119 aa19.18■□□□□ 0.66
LTBP1-203ENST00000404816 VPS39Q96JC1 886 aa19.18■□□□□ 0.66
LTBP1-203ENST00000404816 MRPL40Q9NQ50 206 aaKnown RBP19.18■□□□□ 0.66
LTBP1-203ENST00000404816 AFF4Q9UHB7 1163 aaKnown RBP19.18■□□□□ 0.66
LTBP1-203ENST00000404816 UBE4BO95155 1302 aa19.18■□□□□ 0.66
LTBP1-203ENST00000404816 H3BQF6 201 aa19.18■□□□□ 0.66
LTBP1-203ENST00000404816 HIF1AQ16665 826 aa19.18■□□□□ 0.66
LTBP1-203ENST00000404816 GPR108Q9NPR9 543 aa19.18■□□□□ 0.66
LTBP1-203ENST00000404816 NLRP1Q9C000 1473 aa19.18■□□□□ 0.66
LTBP1-203ENST00000404816 LINC00854A0A1B0GVQ3 168 aa19.18■□□□□ 0.66
LTBP1-203ENST00000404816 LRRIQ3A6PVS8 624 aaPredicted RBP19.18■□□□□ 0.66
LTBP1-203ENST00000404816 PDE5AO76074 875 aa19.18■□□□□ 0.66
LTBP1-203ENST00000404816 EIF2AK2P19525 551 aaKnown RBP19.18■□□□□ 0.66
LTBP1-203ENST00000404816 RASGRF1Q13972 1273 aa19.18■□□□□ 0.66
LTBP1-203ENST00000404816 TBC1D9BQ66K14 1250 aa19.18■□□□□ 0.66
LTBP1-203ENST00000404816 LY9Q9HBG7 655 aa19.18■□□□□ 0.66
LTBP1-203ENST00000404816 PSD3Q9NYI0 1048 aa19.18■□□□□ 0.66
LTBP1-203ENST00000404816 CLEC4FQ8N1N0 589 aa19.18■□□□□ 0.66
LTBP1-203ENST00000404816 HSPBP1Q9NZL4 362 aa19.18■□□□□ 0.66
LTBP1-203ENST00000404816 LOC100653049A0A140TA62 436 aa19.17■□□□□ 0.66
LTBP1-203ENST00000404816 H0Y626 953 aa19.17■□□□□ 0.66
LTBP1-203ENST00000404816 KRT34O76011 436 aa19.17■□□□□ 0.66
LTBP1-203ENST00000404816 TRIM16O95361 564 aa19.17■□□□□ 0.66
LTBP1-203ENST00000404816 MYL3P08590 195 aa19.17■□□□□ 0.66
LTBP1-203ENST00000404816 LIFRP42702 1097 aa19.17■□□□□ 0.66
LTBP1-203ENST00000404816 COBLL1Q53SF7 1204 aa19.17■□□□□ 0.66
LTBP1-203ENST00000404816 LVRNQ6Q4G3 990 aa19.17■□□□□ 0.66
LTBP1-203ENST00000404816 LAYNQ6UX15 382 aa19.17■□□□□ 0.66
LTBP1-203ENST00000404816 ABHD8Q96I13 439 aa19.17■□□□□ 0.66
LTBP1-203ENST00000404816 PLEKHG1Q9ULL1 1385 aa19.17■□□□□ 0.66
LTBP1-203ENST00000404816 SERPINB10P48595 397 aa19.17■□□□□ 0.66
LTBP1-203ENST00000404816 RPF1Q9H9Y2 349 aaKnown RBP19.17■□□□□ 0.66
LTBP1-203ENST00000404816 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.17■□□□□ 0.66
LTBP1-203ENST00000404816 USP17L15C9J2P7 530 aa19.17■□□□□ 0.66
LTBP1-203ENST00000404816 USP17L13C9JLJ4 530 aa19.17■□□□□ 0.66
LTBP1-203ENST00000404816 USP17L11C9JVI0 530 aa19.17■□□□□ 0.66
LTBP1-203ENST00000404816 USP17L18D6R9N7 530 aa19.17■□□□□ 0.66
LTBP1-203ENST00000404816 USP17L22D6RA61 530 aa19.17■□□□□ 0.66
LTBP1-203ENST00000404816 USP17L17D6RBQ6 530 aa19.17■□□□□ 0.66
LTBP1-203ENST00000404816 USP17L19D6RCP7 530 aa19.17■□□□□ 0.66
LTBP1-203ENST00000404816 USP17L20D6RJB6 530 aa19.17■□□□□ 0.66
LTBP1-203ENST00000404816 CRKLP46109 303 aaKnown RBP19.17■□□□□ 0.66
LTBP1-203ENST00000404816 USP17L24Q0WX57 530 aa19.17■□□□□ 0.66
LTBP1-203ENST00000404816 LMBRD2Q68DH5 695 aaPredicted RBP19.17■□□□□ 0.66
LTBP1-203ENST00000404816 USP17L6PQ6QN14 398 aa19.17■□□□□ 0.66
LTBP1-203ENST00000404816 TTC8Q8TAM2 541 aa19.17■□□□□ 0.66
LTBP1-203ENST00000404816 CDK12Q9NYV4 1490 aaPredicted RBP19.17■□□□□ 0.66
LTBP1-203ENST00000404816 PTCH1Q13635 1447 aa19.17■□□□□ 0.66
LTBP1-203ENST00000404816 FAM205CA6NFA0 338 aa19.17■□□□□ 0.66
LTBP1-203ENST00000404816 XPOTO43592 962 aaKnown RBP19.17■□□□□ 0.66
LTBP1-203ENST00000404816 FAM107AO95990 144 aa19.17■□□□□ 0.66
LTBP1-203ENST00000404816 GNA15P30679 374 aa19.17■□□□□ 0.66
LTBP1-203ENST00000404816 MTBPQ96DY7 904 aa19.17■□□□□ 0.66
LTBP1-203ENST00000404816 FBXO2Q9UK22 296 aaPredicted RBP19.17■□□□□ 0.66
LTBP1-203ENST00000404816 DLGAP3O95886 979 aa19.16■□□□□ 0.66
LTBP1-203ENST00000404816 SERPINB2P05120 415 aa19.16■□□□□ 0.66
LTBP1-203ENST00000404816 VAMP7P51809 220 aa19.16■□□□□ 0.66
LTBP1-203ENST00000404816 MRPS35P82673 323 aaKnown RBP19.16■□□□□ 0.66
LTBP1-203ENST00000404816 KRT39Q6A163 491 aa19.16■□□□□ 0.66
LTBP1-203ENST00000404816 PBXIP1Q96AQ6 731 aa19.16■□□□□ 0.66
LTBP1-203ENST00000404816 PRDM5Q9NQX1 630 aaPredicted RBP19.16■□□□□ 0.66
LTBP1-203ENST00000404816 PRR36Q9H6K5 1346 aa19.16■□□□□ 0.66
LTBP1-203ENST00000404816 MYO1GB0I1T2 1018 aa19.16■□□□□ 0.66
LTBP1-203ENST00000404816 CYP26A1O43174 497 aa19.16■□□□□ 0.66
LTBP1-203ENST00000404816 SMARCA1P28370 1054 aa19.16■□□□□ 0.66
LTBP1-203ENST00000404816 SCTRP47872 440 aa19.16■□□□□ 0.66
LTBP1-203ENST00000404816 DMPKQ09013 629 aa19.16■□□□□ 0.66
LTBP1-203ENST00000404816 KNOP1Q1ED39 458 aaKnown RBP19.16■□□□□ 0.66
LTBP1-203ENST00000404816 FAM96AQ9H5X1 160 aa19.16■□□□□ 0.66
LTBP1-203ENST00000404816 CHCHD3Q9NX63 227 aaKnown RBP19.16■□□□□ 0.66
LTBP1-203ENST00000404816 SNAP23O00161 211 aa19.16■□□□□ 0.66
LTBP1-203ENST00000404816 IFNA8P32881 189 aa19.16■□□□□ 0.66
LTBP1-203ENST00000404816 RANBP17Q9H2T7 1088 aaKnown RBP19.16■□□□□ 0.66
LTBP1-203ENST00000404816 SLC9A2Q9UBY0 812 aa19.16■□□□□ 0.66
LTBP1-203ENST00000404816 BCORL1Q5H9F3 1711 aa19.16■□□□□ 0.66
LTBP1-203ENST00000404816 VHLP40337 213 aa19.16■□□□□ 0.66
LTBP1-203ENST00000404816 DEPDC1Q5TB30 811 aa19.16■□□□□ 0.66
LTBP1-203ENST00000404816 CCDC81Q6ZN84 652 aa19.16■□□□□ 0.66
LTBP1-203ENST00000404816 CDR2LQ86X02 465 aaPredicted RBP19.16■□□□□ 0.66
LTBP1-203ENST00000404816 CATSPER1Q8NEC5 780 aa19.16■□□□□ 0.66
LTBP1-203ENST00000404816 BRD8Q9H0E9 1235 aa19.16■□□□□ 0.66
LTBP1-203ENST00000404816 A0A1B0GTH6 734 aa19.16■□□□□ 0.66
LTBP1-203ENST00000404816 M0QYV0 167 aa19.16■□□□□ 0.66
LTBP1-203ENST00000404816 ATMINO43313 823 aaPredicted RBP19.16■□□□□ 0.66
LTBP1-203ENST00000404816 NBNO60934 754 aa19.16■□□□□ 0.66
LTBP1-203ENST00000404816 PAPOLAP51003 745 aaKnown RBP19.16■□□□□ 0.66
LTBP1-203ENST00000404816 NME3Q13232 169 aa19.16■□□□□ 0.66
LTBP1-203ENST00000404816 ZNF555Q8NEP9 628 aa19.16■□□□□ 0.66
LTBP1-203ENST00000404816 SMAD5Q99717 465 aaKnown RBP19.16■□□□□ 0.66
LTBP1-203ENST00000404816 YIPF2Q9BWQ6 316 aa19.16■□□□□ 0.66
LTBP1-203ENST00000404816 PNMA6FA0A0J9YX94 578 aa19.15■□□□□ 0.66
LTBP1-203ENST00000404816 DNAJC3Q13217 504 aa19.15■□□□□ 0.66
LTBP1-203ENST00000404816 STAT4Q14765 748 aa19.15■□□□□ 0.66
LTBP1-203ENST00000404816 RNF139Q8WU17 664 aa19.15■□□□□ 0.66
LTBP1-203ENST00000404816 RFFLQ8WZ73 363 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms