RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 C12orf56Q8IXR9 622 aa32.01■■■□□ 2.71
USP42-202ENST00000404008 SEMA6BQ9H3T3 888 aa32.01■■■□□ 2.71
USP42-202ENST00000404008 PCIF1Q9H4Z3 704 aa32.01■■■□□ 2.71
USP42-202ENST00000404008 PARP2Q9UGN5 583 aa32.01■■■□□ 2.71
USP42-202ENST00000404008 TRAF3IP3Q9Y228 551 aa32.01■■■□□ 2.71
USP42-202ENST00000404008 ANK1P16157 1881 aa32.01■■■□□ 2.71
USP42-202ENST00000404008 CLIC2O15247 247 aa32■■■□□ 2.71
USP42-202ENST00000404008 OFD1O75665 1012 aa32■■■□□ 2.71
USP42-202ENST00000404008 PDCD11Q14690 1871 aaKnown RBP32■■■□□ 2.71
USP42-202ENST00000404008 LRIT3Q3SXY7 679 aa32■■■□□ 2.71
USP42-202ENST00000404008 ZCWPW2Q504Y3 356 aa32■■■□□ 2.71
USP42-202ENST00000404008 GLB1LQ6UWU2 654 aa32■■■□□ 2.71
USP42-202ENST00000404008 ABI1Q8IZP0 508 aa32■■■□□ 2.71
USP42-202ENST00000404008 TMEM174Q8WUU8 243 aa32■■■□□ 2.71
USP42-202ENST00000404008 ACAP3Q96P50 834 aa32■■■□□ 2.71
USP42-202ENST00000404008 CASD1Q96PB1 797 aa32■■■□□ 2.71
USP42-202ENST00000404008 TMEM117Q9H0C3 514 aa32■■■□□ 2.71
USP42-202ENST00000404008 KIAA0391O15091 583 aaKnown RBP31.99■■■□□ 2.71
USP42-202ENST00000404008 CLTAP09496 248 aa31.99■■■□□ 2.71
USP42-202ENST00000404008 TNFSF9P41273 254 aa31.99■■■□□ 2.71
USP42-202ENST00000404008 CENPPQ6IPU0 288 aa31.99■■■□□ 2.71
USP42-202ENST00000404008 ZSWIM2Q8NEG5 633 aa31.99■■■□□ 2.71
USP42-202ENST00000404008 RSPH1Q8WYR4 309 aa31.99■■■□□ 2.71
USP42-202ENST00000404008 SAAL1Q96ER3 474 aa31.99■■■□□ 2.71
USP42-202ENST00000404008 DHTKD1Q96HY7 919 aaPredicted RBP31.99■■■□□ 2.71
USP42-202ENST00000404008 HSPBP1Q9NZL4 362 aa31.99■■■□□ 2.71
USP42-202ENST00000404008 KLK14Q9P0G3 267 aa31.99■■■□□ 2.71
USP42-202ENST00000404008 CPSF3Q9UKF6 684 aaKnown RBP31.99■■■□□ 2.71
USP42-202ENST00000404008 PCDHA11Q9Y5I1 949 aa31.99■■■□□ 2.71
USP42-202ENST00000404008 KIAA1671Q9BY89 1806 aa31.98■■■□□ 2.71
USP42-202ENST00000404008 ARL5CA6NH57 179 aa31.98■■■□□ 2.71
USP42-202ENST00000404008 PSMA7O14818 248 aa31.98■■■□□ 2.71
USP42-202ENST00000404008 INPPL1O15357 1258 aa31.98■■■□□ 2.71
USP42-202ENST00000404008 CALUO43852 315 aaPredicted RBP31.98■■■□□ 2.71
USP42-202ENST00000404008 MLH1P40692 756 aa31.98■■■□□ 2.71
USP42-202ENST00000404008 ACOT2P49753 483 aa31.98■■■□□ 2.71
USP42-202ENST00000404008 NLRP12P59046 1061 aa31.98■■■□□ 2.71
USP42-202ENST00000404008 CRELD2Q6UXH1 353 aaPredicted RBP31.98■■■□□ 2.71
USP42-202ENST00000404008 SP7Q8TDD2 431 aaPredicted RBP31.98■■■□□ 2.71
USP42-202ENST00000404008 ZFP42Q96MM3 310 aa31.98■■■□□ 2.71
USP42-202ENST00000404008 GAD1Q99259 594 aa31.98■■■□□ 2.71
USP42-202ENST00000404008 TRIOBPQ9H2D6 2365 aa31.98■■■□□ 2.71
USP42-202ENST00000404008 TBKBP1A7MCY6 615 aa31.97■■■□□ 2.71
USP42-202ENST00000404008 MEFVO15553 781 aaPredicted RBP31.97■■■□□ 2.71
USP42-202ENST00000404008 LDHAP00338 332 aaKnown RBP31.97■■■□□ 2.71
USP42-202ENST00000404008 YARSP54577 528 aaKnown RBP31.97■■■□□ 2.71
USP42-202ENST00000404008 SMAD3P84022 425 aaKnown RBP31.97■■■□□ 2.71
USP42-202ENST00000404008 CMTR2Q8IYT2 770 aaKnown RBP31.97■■■□□ 2.71
USP42-202ENST00000404008 MLKLQ8NB16 471 aa31.97■■■□□ 2.71
USP42-202ENST00000404008 FAM213AQ9BRX8 229 aa31.97■■■□□ 2.71
USP42-202ENST00000404008 PBX4Q9BYU1 374 aa31.97■■■□□ 2.71
USP42-202ENST00000404008 TOPORSQ9NS56 1045 aaPredicted RBP31.97■■■□□ 2.71
USP42-202ENST00000404008 EXTL3O43909 919 aa31.96■■■□□ 2.71
USP42-202ENST00000404008 NR3C1P04150 777 aa31.96■■■□□ 2.71
USP42-202ENST00000404008 MYOGP15173 224 aa31.96■■■□□ 2.71
USP42-202ENST00000404008 PBX2P40425 430 aa31.96■■■□□ 2.71
USP42-202ENST00000404008 CYP2J2P51589 502 aa31.96■■■□□ 2.71
USP42-202ENST00000404008 AFF1P51825 1210 aaKnown RBP31.96■■■□□ 2.71
USP42-202ENST00000404008 ENOX2Q16206 610 aaKnown RBP31.96■■■□□ 2.71
USP42-202ENST00000404008 NFIL3Q16649 462 aa31.96■■■□□ 2.71
USP42-202ENST00000404008 DPCR1Q3MIW9 517 aa31.96■■■□□ 2.71
USP42-202ENST00000404008 PAN2Q504Q3 1202 aaKnown RBP31.96■■■□□ 2.71
USP42-202ENST00000404008 NOMO2Q5JPE7 1267 aa31.96■■■□□ 2.71
USP42-202ENST00000404008 SLC9A9Q8IVB4 645 aa31.96■■■□□ 2.71
USP42-202ENST00000404008 GPD1LQ8N335 351 aa31.96■■■□□ 2.71
USP42-202ENST00000404008 P2RX5Q93086 422 aa31.96■■■□□ 2.71
USP42-202ENST00000404008 SNX27Q96L92 541 aa31.96■■■□□ 2.71
USP42-202ENST00000404008 INPP5FQ9Y2H2 1132 aa31.96■■■□□ 2.71
USP42-202ENST00000404008 LCHNA4D1U4 455 aa31.95■■■□□ 2.71
USP42-202ENST00000404008 CXCL8P10145 99 aa31.95■■■□□ 2.71
USP42-202ENST00000404008 BTG3Q14201 252 aaPredicted RBP31.95■■■□□ 2.71
USP42-202ENST00000404008 RAB30Q15771 203 aa31.95■■■□□ 2.71
USP42-202ENST00000404008 SLC10A6Q3KNW5 377 aa31.95■■■□□ 2.71
USP42-202ENST00000404008 KLHL10Q6JEL2 608 aa31.95■■■□□ 2.71
USP42-202ENST00000404008 ALKAL1Q6UXT8 129 aa31.95■■■□□ 2.71
USP42-202ENST00000404008 XXYLT1Q8NBI6 393 aa31.95■■■□□ 2.71
USP42-202ENST00000404008 GSTCDQ8NEC7 633 aa31.95■■■□□ 2.71
USP42-202ENST00000404008 FBXL18Q96ME1 805 aa31.95■■■□□ 2.71
USP42-202ENST00000404008 CXCL16Q9H2A7 254 aa31.95■■■□□ 2.71
USP42-202ENST00000404008 DMAC2Q9NW81 257 aa31.95■■■□□ 2.71
USP42-202ENST00000404008 YBX2Q9Y2T7 364 aaKnown RBP31.95■■■□□ 2.71
USP42-202ENST00000404008 NLRC5Q86WI3 1866 aa31.95■■■□□ 2.71
USP42-202ENST00000404008 GOLGA8IPA6NC78 632 aa31.94■■■□□ 2.7
USP42-202ENST00000404008 GOLGA8JA6NMD2 632 aa31.94■■■□□ 2.7
USP42-202ENST00000404008 CCNE1P24864 410 aa31.94■■■□□ 2.7
USP42-202ENST00000404008 PMS1P54277 932 aaKnown RBP31.94■■■□□ 2.7
USP42-202ENST00000404008 EDRF1Q3B7T1 1238 aa31.94■■■□□ 2.7
USP42-202ENST00000404008 XKR4Q5GH76 650 aa31.94■■■□□ 2.7
USP42-202ENST00000404008 SASS6Q6UVJ0 657 aa31.94■■■□□ 2.7
USP42-202ENST00000404008 URGCPQ8TCY9 931 aa31.94■■■□□ 2.7
USP42-202ENST00000404008 MRPL9Q9BYD2 267 aaKnown RBP31.94■■■□□ 2.7
USP42-202ENST00000404008 RPF1Q9H9Y2 349 aaKnown RBP31.94■■■□□ 2.7
USP42-202ENST00000404008 CTNND2Q9UQB3 1225 aa31.94■■■□□ 2.7
USP42-202ENST00000404008 POU5F1Q01860 360 aaKnown RBP31.94■■■□□ 2.7
USP42-202ENST00000404008 LRRC63Q05C16 580 aa31.94■■■□□ 2.7
USP42-202ENST00000404008 MYBPC2Q14324 1141 aa31.94■■■□□ 2.7
USP42-202ENST00000404008 ANKRD40Q6AI12 368 aa31.94■■■□□ 2.7
USP42-202ENST00000404008 LRRC43Q8N309 656 aa31.94■■■□□ 2.7
USP42-202ENST00000404008 NELFBQ8WX92 580 aa31.94■■■□□ 2.7
USP42-202ENST00000404008 RPS6KC1Q96S38 1066 aa31.94■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms