RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 ZBTB33Q86T24 672 aa21.03■□□□□ 0.96
RTN4-207ENST00000402434 TMEM173Q86WV6 379 aaPredicted RBP21.03■□□□□ 0.96
RTN4-207ENST00000402434 CCDC65Q8IXS2 484 aa21.03■□□□□ 0.96
RTN4-207ENST00000402434 CEP120Q8N960 986 aa21.03■□□□□ 0.96
RTN4-207ENST00000402434 HVCN1Q96D96 273 aa21.03■□□□□ 0.96
RTN4-207ENST00000402434 IGSF21Q96ID5 467 aa21.03■□□□□ 0.96
RTN4-207ENST00000402434 GDPD2Q9HCC8 539 aa21.03■□□□□ 0.96
RTN4-207ENST00000402434 TLR9Q9NR96 1032 aa21.03■□□□□ 0.96
RTN4-207ENST00000402434 PANK4Q9NVE7 773 aa21.03■□□□□ 0.96
RTN4-207ENST00000402434 GDAQ9Y2T3 454 aa21.03■□□□□ 0.96
RTN4-207ENST00000402434 ATG2AQ2TAZ0 1938 aa21.02■□□□□ 0.96
RTN4-207ENST00000402434 SLFN14P0C7P3 912 aa21.02■□□□□ 0.96
RTN4-207ENST00000402434 IRS1P35568 1242 aa21.02■□□□□ 0.96
RTN4-207ENST00000402434 ERVFC1P60507 584 aa21.02■□□□□ 0.96
RTN4-207ENST00000402434 NOLC1Q14978 699 aaKnown RBP eCLIP21.02■□□□□ 0.961e-7■□□□□ 8
RTN4-207ENST00000402434 TCEAL5Q5H9L2 206 aa21.02■□□□□ 0.96
RTN4-207ENST00000402434 ALKAL1Q6UXT8 129 aa21.02■□□□□ 0.96
RTN4-207ENST00000402434 BICD1Q96G01 975 aa21.02■□□□□ 0.96
RTN4-207ENST00000402434 TMEM169Q96HH4 297 aa21.02■□□□□ 0.96
RTN4-207ENST00000402434 RPS6KC1Q96S38 1066 aa21.02■□□□□ 0.96
RTN4-207ENST00000402434 CCDC94Q9BW85 323 aaPredicted RBP21.02■□□□□ 0.96
RTN4-207ENST00000402434 HAPLN2Q9GZV7 340 aa21.02■□□□□ 0.96
RTN4-207ENST00000402434 CXCL16Q9H2A7 254 aa21.02■□□□□ 0.96
RTN4-207ENST00000402434 MRPL44Q9H9J2 332 aaKnown RBP21.02■□□□□ 0.96
RTN4-207ENST00000402434 PRDM6Q9NQX0 595 aa21.02■□□□□ 0.96
RTN4-207ENST00000402434 ANKFY1Q9P2R3 1169 aa21.02■□□□□ 0.96
RTN4-207ENST00000402434 TDRD15B5MCY1 1934 aaKnown RBP21.02■□□□□ 0.96
RTN4-207ENST00000402434 NRP1O14786 923 aa21.01■□□□□ 0.95
RTN4-207ENST00000402434 FSCN2O14926 492 aa21.01■□□□□ 0.95
RTN4-207ENST00000402434 HNRNPDLO14979 420 aaKnown RBP21.01■□□□□ 0.95
RTN4-207ENST00000402434 ACTN4O43707 911 aaKnown RBP21.01■□□□□ 0.95
RTN4-207ENST00000402434 ANP32AP39687 249 aaKnown RBP21.01■□□□□ 0.95
RTN4-207ENST00000402434 LIG4P49917 911 aa21.01■□□□□ 0.95
RTN4-207ENST00000402434 COL19A1Q14993 1142 aa21.01■□□□□ 0.95
RTN4-207ENST00000402434 XKR4Q5GH76 650 aa21.01■□□□□ 0.95
RTN4-207ENST00000402434 BCL7CQ8WUZ0 217 aaPredicted RBP21.01■□□□□ 0.95
RTN4-207ENST00000402434 TOPORSQ9NS56 1045 aaPredicted RBP21.01■□□□□ 0.95
RTN4-207ENST00000402434 USP25Q9UHP3 1055 aa21.01■□□□□ 0.95
RTN4-207ENST00000402434 FAN1Q9Y2M0 1017 aa21.01■□□□□ 0.95
RTN4-207ENST00000402434 THP07101 528 aa21.01■□□□□ 0.95
RTN4-207ENST00000402434 NAB2Q15742 525 aa21.01■□□□□ 0.95
RTN4-207ENST00000402434 SLC39A4Q6P5W5 647 aa21.01■□□□□ 0.95
RTN4-207ENST00000402434 DDX53Q86TM3 631 aaKnown RBP21.01■□□□□ 0.95
RTN4-207ENST00000402434 CEP57L1Q8IYX8 460 aa21.01■□□□□ 0.95
RTN4-207ENST00000402434 TBC1D7Q9P0N9 293 aa21.01■□□□□ 0.95
RTN4-207ENST00000402434 SERTAD1Q9UHV2 236 aa21.01■□□□□ 0.95
RTN4-207ENST00000402434 NDUFA8P51970 172 aa21■□□□□ 0.95
RTN4-207ENST00000402434 YARSP54577 528 aaKnown RBP21■□□□□ 0.95
RTN4-207ENST00000402434 OSTNP61366 133 aa21■□□□□ 0.95
RTN4-207ENST00000402434 COASYQ13057 564 aa21■□□□□ 0.95
RTN4-207ENST00000402434 ALCAMQ13740 583 aa21■□□□□ 0.95
RTN4-207ENST00000402434 SKIV2LQ15477 1246 aaKnown RBP21■□□□□ 0.95
RTN4-207ENST00000402434 PHF6Q8IWS0 365 aaKnown RBP eCLIP21■□□□□ 0.956e-6■□□□□ 8.7
RTN4-207ENST00000402434 ACAP3Q96P50 834 aa21■□□□□ 0.95
RTN4-207ENST00000402434 NGRNQ9NPE2 291 aaKnown RBP21■□□□□ 0.95
RTN4-207ENST00000402434 STK39Q9UEW8 545 aa21■□□□□ 0.95
RTN4-207ENST00000402434 COG5Q9UP83 839 aa21■□□□□ 0.95
RTN4-207ENST00000402434 PCDHB13Q9Y5F0 798 aa21■□□□□ 0.95
RTN4-207ENST00000402434 STYXL1Q9Y6J8 313 aa21■□□□□ 0.95
RTN4-207ENST00000402434 A0A0B4J269 797 aa20.99■□□□□ 0.95
RTN4-207ENST00000402434 FAM189A1O60320 539 aa20.99■□□□□ 0.95
RTN4-207ENST00000402434 NR1I2O75469 434 aa20.99■□□□□ 0.95
RTN4-207ENST00000402434 SYKP43405 635 aa20.99■□□□□ 0.95
RTN4-207ENST00000402434 OR1G1P47890 313 aa20.99■□□□□ 0.95
RTN4-207ENST00000402434 CASP5P51878 434 aa20.99■□□□□ 0.95
RTN4-207ENST00000402434 ASIC1P78348 528 aa20.99■□□□□ 0.95
RTN4-207ENST00000402434 KCNA1Q09470 495 aa20.99■□□□□ 0.95
RTN4-207ENST00000402434 TUSC3Q13454 348 aa20.99■□□□□ 0.95
RTN4-207ENST00000402434 MICAL1Q8TDZ2 1067 aa20.99■□□□□ 0.95
RTN4-207ENST00000402434 PPP2R3CQ969Q6 453 aa20.99■□□□□ 0.95
RTN4-207ENST00000402434 PPP1R10Q96QC0 940 aaKnown RBP20.99■□□□□ 0.95
RTN4-207ENST00000402434 TCF25Q9BQ70 676 aa20.99■□□□□ 0.95
RTN4-207ENST00000402434 VN1R3Q9BXE9 311 aa20.99■□□□□ 0.95
RTN4-207ENST00000402434 FGFBP2Q9BYJ0 223 aa20.99■□□□□ 0.95
RTN4-207ENST00000402434 PCDHGC5Q9Y5F6 944 aa20.99■□□□□ 0.95
RTN4-207ENST00000402434 TRIP11Q15643 1979 aa20.99■□□□□ 0.95
RTN4-207ENST00000402434 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.98■□□□□ 0.95
RTN4-207ENST00000402434 SMIM28A0A1B0GU29 152 aa20.98■□□□□ 0.95
RTN4-207ENST00000402434 MEFVO15553 781 aaPredicted RBP20.98■□□□□ 0.95
RTN4-207ENST00000402434 NCK2O43639 380 aa20.98■□□□□ 0.95
RTN4-207ENST00000402434 CSPG5O95196 566 aa20.98■□□□□ 0.95
RTN4-207ENST00000402434 GCNT3O95395 438 aa20.98■□□□□ 0.95
RTN4-207ENST00000402434 EFEMP2O95967 443 aa20.98■□□□□ 0.95
RTN4-207ENST00000402434 HARSP12081 509 aaKnown RBP20.98■□□□□ 0.95
RTN4-207ENST00000402434 AFMP43652 599 aa20.98■□□□□ 0.95
RTN4-207ENST00000402434 EHHADHQ08426 723 aa20.98■□□□□ 0.95
RTN4-207ENST00000402434 HYAL1Q12794 435 aa20.98■□□□□ 0.95
RTN4-207ENST00000402434 KYAT1Q16773 422 aa20.98■□□□□ 0.95
RTN4-207ENST00000402434 SLC10A6Q3KNW5 377 aa20.98■□□□□ 0.95
RTN4-207ENST00000402434 L1TD1Q5T7N2 865 aaKnown RBP20.98■□□□□ 0.95
RTN4-207ENST00000402434 SLFN12LQ6IEE8 588 aa20.98■□□□□ 0.95
RTN4-207ENST00000402434 UNC13DQ70J99 1090 aa20.98■□□□□ 0.95
RTN4-207ENST00000402434 ADGRD2Q7Z7M1 963 aa20.98■□□□□ 0.95
RTN4-207ENST00000402434 HLA-CQ95604 372 aa20.98■□□□□ 0.95
RTN4-207ENST00000402434 PAGE5Q96GU1 130 aa20.98■□□□□ 0.95
RTN4-207ENST00000402434 SNX27Q96L92 541 aa20.98■□□□□ 0.95
RTN4-207ENST00000402434 MARCH5Q9NX47 278 aa20.98■□□□□ 0.95
RTN4-207ENST00000402434 THEGQ9P2T0 379 aa20.98■□□□□ 0.95
RTN4-207ENST00000402434 UNC80Q8N2C7 3258 aa20.98■□□□□ 0.95
RTN4-207ENST00000402434 PVALEFA0A1B0GWK0 134 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms