RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 ERCC5P28715 1186 aaPredicted RBP8.22□□□□□ -1.09
USP16-204ENST00000399976 HOXD13P35453 343 aa8.22□□□□□ -1.09
USP16-204ENST00000399976 PPP2R3AQ06190 1150 aa8.22□□□□□ -1.09
USP16-204ENST00000399976 TMEM62Q0P6H9 643 aa8.22□□□□□ -1.09
USP16-204ENST00000399976 NAB2Q15742 525 aa8.22□□□□□ -1.09
USP16-204ENST00000399976 ZNF568Q3ZCX4 644 aa8.22□□□□□ -1.09
USP16-204ENST00000399976 NOMO2Q5JPE7 1267 aa8.22□□□□□ -1.09
USP16-204ENST00000399976 CCDC183Q5T5S1 534 aa8.22□□□□□ -1.09
USP16-204ENST00000399976 NOC3LQ8WTT2 800 aaKnown RBP8.22□□□□□ -1.09
USP16-204ENST00000399976 PPP1R10Q96QC0 940 aaKnown RBP8.22□□□□□ -1.09
USP16-204ENST00000399976 SH2D3AQ9BRG2 576 aa8.22□□□□□ -1.09
USP16-204ENST00000399976 OSBPL7Q9BZF2 842 aa8.22□□□□□ -1.09
USP16-204ENST00000399976 NUP62CLQ9H1M0 184 aa8.22□□□□□ -1.09
USP16-204ENST00000399976 CWH43Q9H720 699 aa8.22□□□□□ -1.09
USP16-204ENST00000399976 GDPD2Q9HCC8 539 aa8.22□□□□□ -1.09
USP16-204ENST00000399976 COLQQ9Y215 455 aaPredicted RBP8.22□□□□□ -1.09
USP16-204ENST00000399976 PATJQ8NI35 1801 aa8.21□□□□□ -1.09
USP16-204ENST00000399976 HNRNPDLO14979 420 aaKnown RBP8.21□□□□□ -1.09
USP16-204ENST00000399976 TGFB1I1O43294 461 aa8.21□□□□□ -1.09
USP16-204ENST00000399976 GNA14O95837 355 aa8.21□□□□□ -1.09
USP16-204ENST00000399976 ACRP10323 421 aa8.21□□□□□ -1.09
USP16-204ENST00000399976 YARSP54577 528 aaKnown RBP8.21□□□□□ -1.09
USP16-204ENST00000399976 DEFB103AP81534 67 aa8.21□□□□□ -1.09
USP16-204ENST00000399976 COL19A1Q14993 1142 aa8.21□□□□□ -1.09
USP16-204ENST00000399976 CLLU1OSQ5K130 101 aa8.21□□□□□ -1.09
USP16-204ENST00000399976 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.21□□□□□ -1.09
USP16-204ENST00000399976 GPD1LQ8N335 351 aa8.21□□□□□ -1.09
USP16-204ENST00000399976 MFSD14AQ96MC6 490 aa8.21□□□□□ -1.09
USP16-204ENST00000399976 CXXC1Q9P0U4 656 aaPredicted RBP8.21□□□□□ -1.09
USP16-204ENST00000399976 USP20Q9Y2K6 914 aa8.21□□□□□ -1.09
USP16-204ENST00000399976 IRAK3Q9Y616 596 aa8.21□□□□□ -1.09
USP16-204ENST00000399976 STX10O60499 249 aa8.21□□□□□ -1.1
USP16-204ENST00000399976 FGFR1OPO95684 399 aaKnown RBP8.21□□□□□ -1.1
USP16-204ENST00000399976 POU2F2P09086 479 aa8.21□□□□□ -1.1
USP16-204ENST00000399976 CCNE1P24864 410 aa8.21□□□□□ -1.1
USP16-204ENST00000399976 NMT1P30419 496 aaKnown RBP8.21□□□□□ -1.1
USP16-204ENST00000399976 ELAVL2Q12926 359 aaKnown RBP8.21□□□□□ -1.1
USP16-204ENST00000399976 NFX1Q12986 1120 aaKnown RBP8.21□□□□□ -1.1
USP16-204ENST00000399976 PSMD6Q15008 389 aa8.21□□□□□ -1.1
USP16-204ENST00000399976 ZRSR1Q15695 479 aaKnown RBP8.21□□□□□ -1.1
USP16-204ENST00000399976 HABP4Q5JVS0 413 aaKnown RBP8.21□□□□□ -1.1
USP16-204ENST00000399976 FIBCD1Q8N539 461 aa8.21□□□□□ -1.1
USP16-204ENST00000399976 ACAP3Q96P50 834 aa8.21□□□□□ -1.1
USP16-204ENST00000399976 TGS1Q96RS0 853 aaKnown RBP8.21□□□□□ -1.1
USP16-204ENST00000399976 VRTNQ9H8Y1 702 aa8.21□□□□□ -1.1
USP16-204ENST00000399976 AGPAT3Q9NRZ7 376 aa8.21□□□□□ -1.1
USP16-204ENST00000399976 PCDHA5Q9Y5H7 936 aa8.21□□□□□ -1.1
USP16-204ENST00000399976 DENND4AQ7Z401 1863 aa8.21□□□□□ -1.1
USP16-204ENST00000399976 IKBKBO14920 756 aa8.2□□□□□ -1.1
USP16-204ENST00000399976 B4GALT5O43286 388 aa8.2□□□□□ -1.1
USP16-204ENST00000399976 NPTXRO95502 500 aa8.2□□□□□ -1.1
USP16-204ENST00000399976 PRR29P0C7W0 189 aa8.2□□□□□ -1.1
USP16-204ENST00000399976 MYBP10242 640 aa8.2□□□□□ -1.1
USP16-204ENST00000399976 IDEP14735 1019 aa8.2□□□□□ -1.1
USP16-204ENST00000399976 AARSP49588 968 aaKnown RBP eCLIP8.2□□□□□ -1.1
USP16-204ENST00000399976 TUSC3Q13454 348 aa8.2□□□□□ -1.1
USP16-204ENST00000399976 C11orf84Q9BUA3 381 aaPredicted RBP8.2□□□□□ -1.1
USP16-204ENST00000399976 HERC2P3Q9BVR0 1158 aa8.2□□□□□ -1.1
USP16-204ENST00000399976 MAN1B1Q9UKM7 699 aa8.2□□□□□ -1.1
USP16-204ENST00000399976 AGO2Q9UKV8 859 aaKnown RBP8.2□□□□□ -1.1
USP16-204ENST00000399976 VWA8A3KMH1 1905 aa8.2□□□□□ -1.1
USP16-204ENST00000399976 PSMA7O14818 248 aa8.2□□□□□ -1.1
USP16-204ENST00000399976 FSCN2O14926 492 aa8.2□□□□□ -1.1
USP16-204ENST00000399976 ADSSP30520 456 aa8.2□□□□□ -1.1
USP16-204ENST00000399976 AFMP43652 599 aa8.2□□□□□ -1.1
USP16-204ENST00000399976 NLRP12P59046 1061 aa8.2□□□□□ -1.1
USP16-204ENST00000399976 STK4Q13043 487 aa8.2□□□□□ -1.1
USP16-204ENST00000399976 OTOP2Q7RTS6 562 aa8.2□□□□□ -1.1
USP16-204ENST00000399976 WDR49Q8IV35 697 aa8.2□□□□□ -1.1
USP16-204ENST00000399976 COLGALT2Q8IYK4 626 aa8.2□□□□□ -1.1
USP16-204ENST00000399976 XXYLT1Q8NBI6 393 aa8.2□□□□□ -1.1
USP16-204ENST00000399976 GSTCDQ8NEC7 633 aa8.2□□□□□ -1.1
USP16-204ENST00000399976 PPP1R13LQ8WUF5 828 aa8.2□□□□□ -1.1
USP16-204ENST00000399976 TSG101Q99816 390 aa8.2□□□□□ -1.1
USP16-204ENST00000399976 TARS2Q9BW92 718 aaKnown RBP8.2□□□□□ -1.1
USP16-204ENST00000399976 PBX4Q9BYU1 374 aa8.2□□□□□ -1.1
USP16-204ENST00000399976 TRIM6Q9C030 488 aaPredicted RBP8.2□□□□□ -1.1
USP16-204ENST00000399976 RWDD2AQ9UIY3 292 aa8.2□□□□□ -1.1
USP16-204ENST00000399976 UBQLN1Q9UMX0 589 aaKnown RBP8.2□□□□□ -1.1
USP16-204ENST00000399976 LINC01553A4QN01 128 aa8.19□□□□□ -1.1
USP16-204ENST00000399976 H3BNC9 293 aa8.19□□□□□ -1.1
USP16-204ENST00000399976 P4HA2O15460 535 aa8.19□□□□□ -1.1
USP16-204ENST00000399976 NCK2O43639 380 aa8.19□□□□□ -1.1
USP16-204ENST00000399976 TLL1O43897 1013 aa8.19□□□□□ -1.1
USP16-204ENST00000399976 DEKP35659 375 aaKnown RBP8.19□□□□□ -1.1
USP16-204ENST00000399976 PNPLA4P41247 253 aa8.19□□□□□ -1.1
USP16-204ENST00000399976 CASP5P51878 434 aa8.19□□□□□ -1.1
USP16-204ENST00000399976 TAP1Q03518 808 aa8.19□□□□□ -1.1
USP16-204ENST00000399976 EEF1DP3Q658K8 133 aa8.19□□□□□ -1.1
USP16-204ENST00000399976 CRELD2Q6UXH1 353 aaPredicted RBP8.19□□□□□ -1.1
USP16-204ENST00000399976 COLGALT1Q8NBJ5 622 aa8.19□□□□□ -1.1
USP16-204ENST00000399976 GPT2Q8TD30 523 aa8.19□□□□□ -1.1
USP16-204ENST00000399976 HDAC7Q8WUI4 952 aa8.19□□□□□ -1.1
USP16-204ENST00000399976 TAF4BQ92750 862 aa8.19□□□□□ -1.1
USP16-204ENST00000399976 TIFAQ96CG3 184 aa8.19□□□□□ -1.1
USP16-204ENST00000399976 CDCA3Q99618 268 aaPredicted RBP8.19□□□□□ -1.1
USP16-204ENST00000399976 MSTO1Q9BUK6 570 aa8.19□□□□□ -1.1
USP16-204ENST00000399976 EIF2AQ9BY44 585 aaKnown RBP8.19□□□□□ -1.1
USP16-204ENST00000399976 METTL14Q9HCE5 456 aaKnown RBP8.19□□□□□ -1.1
USP16-204ENST00000399976 PTPRDP23468 1912 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms