RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 PHC3Q8NDX5 983 aa18.25■□□□□ 0.51
PTPRA-205ENST00000399903 CKAP2Q8WWK9 683 aa18.25■□□□□ 0.51
PTPRA-205ENST00000399903 C9orf72Q96LT7 481 aa18.25■□□□□ 0.51
PTPRA-205ENST00000399903 DCTN4Q9UJW0 460 aa18.25■□□□□ 0.51
PTPRA-205ENST00000399903 SH3BP1Q9Y3L3 701 aa18.25■□□□□ 0.51
PTPRA-205ENST00000399903 AKAP3O75969 853 aa18.25■□□□□ 0.51
PTPRA-205ENST00000399903 OAS1P00973 400 aaKnown RBP18.25■□□□□ 0.51
PTPRA-205ENST00000399903 GALNT15Q8N3T1 639 aa18.25■□□□□ 0.51
PTPRA-205ENST00000399903 GJB6O95452 261 aa18.24■□□□□ 0.51
PTPRA-205ENST00000399903 RARGP13631 454 aa18.24■□□□□ 0.51
PTPRA-205ENST00000399903 CHKAP35790 457 aa18.24■□□□□ 0.51
PTPRA-205ENST00000399903 DRAP1Q14919 205 aaPredicted RBP18.24■□□□□ 0.51
PTPRA-205ENST00000399903 CGB2Q6NT52 195 aa18.24■□□□□ 0.51
PTPRA-205ENST00000399903 SLFN11Q7Z7L1 901 aa18.24■□□□□ 0.51
PTPRA-205ENST00000399903 UBL4BQ8N7F7 174 aa18.24■□□□□ 0.51
PTPRA-205ENST00000399903 DENND2DQ9H6A0 471 aaPredicted RBP18.24■□□□□ 0.51
PTPRA-205ENST00000399903 CDK5RAP2Q96SN8 1893 aa18.24■□□□□ 0.51
PTPRA-205ENST00000399903 POTEFA5A3E0 1075 aa18.24■□□□□ 0.51
PTPRA-205ENST00000399903 ATP9AO75110 1047 aa18.24■□□□□ 0.51
PTPRA-205ENST00000399903 RNF8O76064 485 aa18.24■□□□□ 0.51
PTPRA-205ENST00000399903 POTEIP0CG38 1075 aa18.24■□□□□ 0.51
PTPRA-205ENST00000399903 COBLL1Q53SF7 1204 aa18.24■□□□□ 0.51
PTPRA-205ENST00000399903 DACT2Q5SW24 774 aa18.24■□□□□ 0.51
PTPRA-205ENST00000399903 POTEGQ6S5H5 508 aa18.24■□□□□ 0.51
PTPRA-205ENST00000399903 POTEEQ6S8J3 1075 aa18.24■□□□□ 0.51
PTPRA-205ENST00000399903 ARHGAP22Q7Z5H3 698 aa18.24■□□□□ 0.51
PTPRA-205ENST00000399903 CARD9Q9H257 536 aa18.24■□□□□ 0.51
PTPRA-205ENST00000399903 DDX25Q9UHL0 483 aaKnown RBP18.24■□□□□ 0.51
PTPRA-205ENST00000399903 RASA4BC9J798 803 aa18.23■□□□□ 0.51
PTPRA-205ENST00000399903 RASA4O43374 803 aa18.23■□□□□ 0.51
PTPRA-205ENST00000399903 GCNT3O95395 438 aa18.23■□□□□ 0.51
PTPRA-205ENST00000399903 ZBTB48P10074 688 aaPredicted RBP18.23■□□□□ 0.51
PTPRA-205ENST00000399903 GNAZP19086 355 aa18.23■□□□□ 0.51
PTPRA-205ENST00000399903 FOXN2P32314 431 aa18.23■□□□□ 0.51
PTPRA-205ENST00000399903 RRP1BQ14684 758 aaKnown RBP18.23■□□□□ 0.51
PTPRA-205ENST00000399903 RCN1Q15293 331 aa18.23■□□□□ 0.51
PTPRA-205ENST00000399903 RFWD3Q6PCD5 774 aa18.23■□□□□ 0.51
PTPRA-205ENST00000399903 NSMFQ6X4W1 530 aa18.23■□□□□ 0.51
PTPRA-205ENST00000399903 CROCCP2Q86T23 111 aa18.23■□□□□ 0.51
PTPRA-205ENST00000399903 GORASP1Q9BQQ3 440 aa18.23■□□□□ 0.51
PTPRA-205ENST00000399903 NMRK1Q9NWW6 199 aa18.23■□□□□ 0.51
PTPRA-205ENST00000399903 PARP2Q9UGN5 583 aa18.23■□□□□ 0.51
PTPRA-205ENST00000399903 BTNL10A8MVZ5 291 aa18.23■□□□□ 0.51
PTPRA-205ENST00000399903 POC1B-GALNT4F8VUJ3 575 aa18.23■□□□□ 0.51
PTPRA-205ENST00000399903 O00370 1275 aa18.23■□□□□ 0.51
PTPRA-205ENST00000399903 KCNA1Q09470 495 aa18.23■□□□□ 0.51
PTPRA-205ENST00000399903 QRICH1Q2TAL8 776 aa18.23■□□□□ 0.51
PTPRA-205ENST00000399903 ASPRV1Q53RT3 343 aa18.23■□□□□ 0.51
PTPRA-205ENST00000399903 SLFN13Q68D06 897 aa18.23■□□□□ 0.51
PTPRA-205ENST00000399903 ARHGEF18Q6ZSZ5 1173 aa18.23■□□□□ 0.51
PTPRA-205ENST00000399903 ANKLE1Q8NAG6 615 aa18.23■□□□□ 0.51
PTPRA-205ENST00000399903 KIFAP3Q92845 792 aa18.23■□□□□ 0.51
PTPRA-205ENST00000399903 CCDC134Q9H6E4 229 aa18.23■□□□□ 0.51
PTPRA-205ENST00000399903 PSTPIP2Q9H939 334 aa18.23■□□□□ 0.51
PTPRA-205ENST00000399903 DNAJC12Q9UKB3 198 aa18.23■□□□□ 0.51
PTPRA-205ENST00000399903 COG5Q9UP83 839 aa18.23■□□□□ 0.51
PTPRA-205ENST00000399903 LRRC42Q9Y546 428 aa18.23■□□□□ 0.51
PTPRA-205ENST00000399903 PASKQ96RG2 1323 aa18.23■□□□□ 0.51
PTPRA-205ENST00000399903 GH2P01242 217 aa18.23■□□□□ 0.51
PTPRA-205ENST00000399903 CNGA1P29973 690 aa18.23■□□□□ 0.51
PTPRA-205ENST00000399903 SFR1Q86XK3 245 aa18.23■□□□□ 0.51
PTPRA-205ENST00000399903 SCYL3Q8IZE3 742 aa18.23■□□□□ 0.51
PTPRA-205ENST00000399903 ATG4AQ8WYN0 398 aa18.23■□□□□ 0.51
PTPRA-205ENST00000399903 RUNDC3BQ96NL0 473 aa18.23■□□□□ 0.51
PTPRA-205ENST00000399903 CNOT7Q9UIV1 285 aaKnown RBP18.23■□□□□ 0.51
PTPRA-205ENST00000399903 PCDHA1Q9Y5I3 950 aa18.23■□□□□ 0.51
PTPRA-205ENST00000399903 ETS2P15036 469 aa18.22■□□□□ 0.51
PTPRA-205ENST00000399903 HOXA13P31271 388 aaPredicted RBP18.22■□□□□ 0.51
PTPRA-205ENST00000399903 CHRNA3P32297 505 aa18.22■□□□□ 0.51
PTPRA-205ENST00000399903 EPM2AIP1Q7L775 607 aaPredicted RBP18.22■□□□□ 0.51
PTPRA-205ENST00000399903 PODNQ7Z5L7 613 aa18.22■□□□□ 0.51
PTPRA-205ENST00000399903 WDR35Q9P2L0 1181 aa18.22■□□□□ 0.51
PTPRA-205ENST00000399903 CHKBQ9Y259 395 aa18.22■□□□□ 0.51
PTPRA-205ENST00000399903 ANKRD31Q8N7Z5 1873 aa18.22■□□□□ 0.51
PTPRA-205ENST00000399903 PCNTO95613 3336 aa18.22■□□□□ 0.51
PTPRA-205ENST00000399903 IGKV6D-41A0A0C4DH26 115 aa18.22■□□□□ 0.51
PTPRA-205ENST00000399903 GCLCP48506 637 aaPredicted RBP18.22■□□□□ 0.51
PTPRA-205ENST00000399903 CACNA2D1P54289 1103 aa18.22■□□□□ 0.51
PTPRA-205ENST00000399903 CYP4A11Q02928 519 aa18.22■□□□□ 0.51
PTPRA-205ENST00000399903 KHDC1Q4VXA5 237 aaKnown RBP18.22■□□□□ 0.51
PTPRA-205ENST00000399903 ZC2HC1CQ53FD0 456 aaPredicted RBP18.22■□□□□ 0.51
PTPRA-205ENST00000399903 PHLDB2Q86SQ0 1253 aa18.22■□□□□ 0.51
PTPRA-205ENST00000399903 ZDHHC14Q8IZN3 488 aa18.22■□□□□ 0.51
PTPRA-205ENST00000399903 C4orf33Q8N1A6 199 aa18.22■□□□□ 0.51
PTPRA-205ENST00000399903 MTMR9Q96QG7 549 aa18.22■□□□□ 0.51
PTPRA-205ENST00000399903 MTUS1Q9ULD2 1270 aa18.22■□□□□ 0.51
PTPRA-205ENST00000399903 PNMA6FA0A0J9YX94 578 aa18.21■□□□□ 0.51
PTPRA-205ENST00000399903 YDJCA8MPS7 323 aa18.21■□□□□ 0.51
PTPRA-205ENST00000399903 BHMG1C9JSJ3 638 aaPredicted RBP18.21■□□□□ 0.51
PTPRA-205ENST00000399903 PODXLO00592 558 aa18.21■□□□□ 0.51
PTPRA-205ENST00000399903 MAPK13O15264 365 aa18.21■□□□□ 0.51
PTPRA-205ENST00000399903 TRIM49P0CI25 452 aa18.21■□□□□ 0.51
PTPRA-205ENST00000399903 TRIM49CP0CI26 452 aa18.21■□□□□ 0.51
PTPRA-205ENST00000399903 ATP5DP30049 168 aa18.21■□□□□ 0.51
PTPRA-205ENST00000399903 PTGIRP43119 386 aa18.21■□□□□ 0.51
PTPRA-205ENST00000399903 IL9RQ01113 521 aa18.21■□□□□ 0.51
PTPRA-205ENST00000399903 PPP2R5EQ16537 467 aa18.21■□□□□ 0.51
PTPRA-205ENST00000399903 TBC1D25Q3MII6 688 aa18.21■□□□□ 0.51
PTPRA-205ENST00000399903 EAPPQ56P03 285 aaPredicted RBP18.21■□□□□ 0.51
PTPRA-205ENST00000399903 SNX30Q5VWJ9 437 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms