RNA–Protein interactions for RNA: ENST00000399338.8

ITSN1-207, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-207ENST00000399338 FAM209AQ5JX71 171 aa11.76□□□□□ -0.53
ITSN1-207ENST00000399338 BORAQ6PGQ7 559 aa11.76□□□□□ -0.53
ITSN1-207ENST00000399338 RAPH1Q70E73 1250 aa11.76□□□□□ -0.53
ITSN1-207ENST00000399338 MTDHQ86UE4 582 aaKnown RBP11.76□□□□□ -0.53
ITSN1-207ENST00000399338 C7orf43Q8WVR3 580 aa11.76□□□□□ -0.53
ITSN1-207ENST00000399338 MCUR1Q96AQ8 359 aa11.76□□□□□ -0.53
ITSN1-207ENST00000399338 RUNDC3BQ96NL0 473 aa11.76□□□□□ -0.53
ITSN1-207ENST00000399338 NKIRAS1Q9NYS0 192 aa11.76□□□□□ -0.53
ITSN1-207ENST00000399338 SCHIP1Q9P0W5 487 aaPredicted RBP11.76□□□□□ -0.53
ITSN1-207ENST00000399338 RABL2AQ9UBK7 228 aaPredicted RBP11.76□□□□□ -0.53
ITSN1-207ENST00000399338 FAF1Q9UNN5 650 aaPredicted RBP11.76□□□□□ -0.53
ITSN1-207ENST00000399338 ADGRA3Q8IWK6 1321 aa11.76□□□□□ -0.53
ITSN1-207ENST00000399338 LRP6O75581 1613 aa11.76□□□□□ -0.53
ITSN1-207ENST00000399338 LAMB4A4D0S4 1761 aa11.76□□□□□ -0.53
ITSN1-207ENST00000399338 SLIT3O75094 1523 aa11.75□□□□□ -0.53
ITSN1-207ENST00000399338 HSPA8P11142 646 aaKnown RBP11.75□□□□□ -0.53
ITSN1-207ENST00000399338 VCLP18206 1134 aa11.75□□□□□ -0.53
ITSN1-207ENST00000399338 RPL21P46778 160 aaKnown RBP11.75□□□□□ -0.53
ITSN1-207ENST00000399338 BCAP31P51572 246 aa11.75□□□□□ -0.53
ITSN1-207ENST00000399338 RRP1BQ14684 758 aaKnown RBP11.75□□□□□ -0.53
ITSN1-207ENST00000399338 PDK3Q15120 406 aa11.75□□□□□ -0.53
ITSN1-207ENST00000399338 EXOC3L4Q17RC7 722 aa11.75□□□□□ -0.53
ITSN1-207ENST00000399338 TTC38Q5R3I4 469 aa11.75□□□□□ -0.53
ITSN1-207ENST00000399338 NLRP9Q7RTR0 991 aa11.75□□□□□ -0.53
ITSN1-207ENST00000399338 HES6Q96HZ4 224 aa11.75□□□□□ -0.53
ITSN1-207ENST00000399338 NSMCE3Q96MG7 304 aa11.75□□□□□ -0.53
ITSN1-207ENST00000399338 TUBB6Q9BUF5 446 aa11.75□□□□□ -0.53
ITSN1-207ENST00000399338 SLCO1B3Q9NPD5 702 aa11.75□□□□□ -0.53
ITSN1-207ENST00000399338 CEP72Q9P209 647 aa11.75□□□□□ -0.53
ITSN1-207ENST00000399338 MTRF1LQ9UGC7 380 aaKnown RBP11.75□□□□□ -0.53
ITSN1-207ENST00000399338 ARMCX3Q9UH62 379 aaPredicted RBP11.75□□□□□ -0.53
ITSN1-207ENST00000399338 DOLKQ9UPQ8 538 aa11.75□□□□□ -0.53
ITSN1-207ENST00000399338 COQ6Q9Y2Z9 468 aa11.75□□□□□ -0.53
ITSN1-207ENST00000399338 PCDHA3Q9Y5H8 950 aa11.75□□□□□ -0.53
ITSN1-207ENST00000399338 CCDC61Q9Y6R9 512 aa11.75□□□□□ -0.53
ITSN1-207ENST00000399338 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.75□□□□□ -0.53
ITSN1-207ENST00000399338 ABCB11O95342 1321 aa11.75□□□□□ -0.53
ITSN1-207ENST00000399338 A0A088AWK7 358 aa11.75□□□□□ -0.53
ITSN1-207ENST00000399338 SPECC1L-ADORA2AF8WAN1 911 aa11.75□□□□□ -0.53
ITSN1-207ENST00000399338 PHF2O75151 1096 aa11.75□□□□□ -0.53
ITSN1-207ENST00000399338 NOL4O94818 638 aa11.75□□□□□ -0.53
ITSN1-207ENST00000399338 PTGIRP43119 386 aa11.75□□□□□ -0.53
ITSN1-207ENST00000399338 MAPK7Q13164 816 aa11.75□□□□□ -0.53
ITSN1-207ENST00000399338 RASSF3Q86WH2 238 aa11.75□□□□□ -0.53
ITSN1-207ENST00000399338 WDR75Q8IWA0 830 aaKnown RBP11.75□□□□□ -0.53
ITSN1-207ENST00000399338 SCYL3Q8IZE3 742 aa11.75□□□□□ -0.53
ITSN1-207ENST00000399338 PYROXD1Q8WU10 500 aa11.75□□□□□ -0.53
ITSN1-207ENST00000399338 SPOCK2Q92563 424 aa11.75□□□□□ -0.53
ITSN1-207ENST00000399338 DDX12PQ92771 950 aa11.75□□□□□ -0.53
ITSN1-207ENST00000399338 PUS7LQ9H0K6 701 aaKnown RBP11.75□□□□□ -0.53
ITSN1-207ENST00000399338 ERVK-5Q9HDB9 667 aa11.75□□□□□ -0.53
ITSN1-207ENST00000399338 TAS2R1Q9NYW7 299 aa11.75□□□□□ -0.53
ITSN1-207ENST00000399338 ADAMTS1Q9UHI8 967 aa11.75□□□□□ -0.53
ITSN1-207ENST00000399338 FLT4P35916 1363 aa11.75□□□□□ -0.53
ITSN1-207ENST00000399338 ARHGAP10A1A4S6 786 aa11.75□□□□□ -0.53
ITSN1-207ENST00000399338 CCDC160A6NGH7 325 aa11.75□□□□□ -0.53
ITSN1-207ENST00000399338 KDM1AO60341 852 aa11.75□□□□□ -0.53
ITSN1-207ENST00000399338 DKC1O60832 514 aaKnown RBP eCLIP11.75□□□□□ -0.53
ITSN1-207ENST00000399338 CLPTM1O96005 669 aa11.75□□□□□ -0.53
ITSN1-207ENST00000399338 IFIT1P09914 478 aaKnown RBP11.75□□□□□ -0.53
ITSN1-207ENST00000399338 TKTP29401 623 aaKnown RBP11.75□□□□□ -0.53
ITSN1-207ENST00000399338 SFT2D3Q587I9 215 aa11.75□□□□□ -0.53
ITSN1-207ENST00000399338 PEX26Q7Z412 305 aa11.75□□□□□ -0.53
ITSN1-207ENST00000399338 ADGRG6Q86SQ4 1221 aa11.75□□□□□ -0.53
ITSN1-207ENST00000399338 NT5DC3Q86UY8 548 aa11.75□□□□□ -0.53
ITSN1-207ENST00000399338 VPS52Q8N1B4 723 aa11.75□□□□□ -0.53
ITSN1-207ENST00000399338 ZNF713Q8N859 430 aaPredicted RBP11.75□□□□□ -0.53
ITSN1-207ENST00000399338 TTLL11Q8NHH1 800 aa11.75□□□□□ -0.53
ITSN1-207ENST00000399338 TRPC4APQ8TEL6 797 aa11.75□□□□□ -0.53
ITSN1-207ENST00000399338 TNFRSF25Q93038 417 aa11.75□□□□□ -0.53
ITSN1-207ENST00000399338 PHF20Q9BVI0 1012 aa11.75□□□□□ -0.53
ITSN1-207ENST00000399338 CRNKL1Q9BZJ0 848 aaKnown RBP11.75□□□□□ -0.53
ITSN1-207ENST00000399338 NDEL1Q9GZM8 345 aa11.75□□□□□ -0.53
ITSN1-207ENST00000399338 DYTNA2CJ06 578 aa11.74□□□□□ -0.53
ITSN1-207ENST00000399338 KRT2P35908 639 aa11.74□□□□□ -0.53
ITSN1-207ENST00000399338 AP2B1P63010 937 aa11.74□□□□□ -0.53
ITSN1-207ENST00000399338 MECOMQ03112 1051 aa11.74□□□□□ -0.53
ITSN1-207ENST00000399338 DLG1Q12959 904 aa11.74□□□□□ -0.53
ITSN1-207ENST00000399338 KCTD21Q4G0X4 260 aa11.74□□□□□ -0.53
ITSN1-207ENST00000399338 C10orf76Q5T2E6 689 aa11.74□□□□□ -0.53
ITSN1-207ENST00000399338 ELMSAN1Q6PJG2 1045 aa11.74□□□□□ -0.53
ITSN1-207ENST00000399338 TRMT10CQ7L0Y3 403 aaKnown RBP11.74□□□□□ -0.53
ITSN1-207ENST00000399338 BPHLQ86WA6 291 aaPredicted RBP11.74□□□□□ -0.53
ITSN1-207ENST00000399338 U2AF1L4Q8WU68 220 aaKnown RBP11.74□□□□□ -0.53
ITSN1-207ENST00000399338 NSL1Q96IY1 281 aa11.74□□□□□ -0.53
ITSN1-207ENST00000399338 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.74□□□□□ -0.53
ITSN1-207ENST00000399338 DISC1Q9NRI5 854 aa11.74□□□□□ -0.53
ITSN1-207ENST00000399338 UVRAGQ9P2Y5 699 aa11.74□□□□□ -0.53
ITSN1-207ENST00000399338 PARP2Q9UGN5 583 aa11.74□□□□□ -0.53
ITSN1-207ENST00000399338 PRELID1Q9Y255 219 aa11.74□□□□□ -0.53
ITSN1-207ENST00000399338 NWD1Q149M9 1564 aa11.74□□□□□ -0.53
ITSN1-207ENST00000399338 COPB2P35606 906 aa11.74□□□□□ -0.53
ITSN1-207ENST00000399338 KYNUQ16719 465 aa11.74□□□□□ -0.53
ITSN1-207ENST00000399338 RTN1Q16799 776 aa11.74□□□□□ -0.53
ITSN1-207ENST00000399338 TMEM266Q2M3C6 531 aa11.74□□□□□ -0.53
ITSN1-207ENST00000399338 ARL13BQ3SXY8 428 aa11.74□□□□□ -0.53
ITSN1-207ENST00000399338 RABL6Q3YEC7 729 aaPredicted RBP11.74□□□□□ -0.53
ITSN1-207ENST00000399338 ANKRD20A4Q4UJ75 823 aa11.74□□□□□ -0.53
ITSN1-207ENST00000399338 FAM83BQ5T0W9 1011 aa11.74□□□□□ -0.53
ITSN1-207ENST00000399338 IL23RQ5VWK5 629 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms