RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 RASA4BC9J798 803 aa10.13□□□□□ -0.79
SMAD9-203ENST00000399275 H7C1W4 665 aa10.13□□□□□ -0.79
SMAD9-203ENST00000399275 RASA4O43374 803 aa10.13□□□□□ -0.79
SMAD9-203ENST00000399275 CTDNEP1O95476 244 aa10.13□□□□□ -0.79
SMAD9-203ENST00000399275 GAP43P17677 238 aa10.13□□□□□ -0.79
SMAD9-203ENST00000399275 MYL7Q01449 175 aa10.13□□□□□ -0.79
SMAD9-203ENST00000399275 PTK2BQ14289 1009 aa10.13□□□□□ -0.79
SMAD9-203ENST00000399275 CWF19L1Q69YN2 538 aaKnown RBP10.13□□□□□ -0.79
SMAD9-203ENST00000399275 LPCAT2Q7L5N7 544 aa10.13□□□□□ -0.79
SMAD9-203ENST00000399275 RNPC3Q96LT9 517 aaKnown RBP10.13□□□□□ -0.79
SMAD9-203ENST00000399275 USP40Q9NVE5 1235 aa10.13□□□□□ -0.79
SMAD9-203ENST00000399275 MRPL39Q9NYK5 338 aaKnown RBP10.13□□□□□ -0.79
SMAD9-203ENST00000399275 METP08581 1390 aa10.13□□□□□ -0.79
SMAD9-203ENST00000399275 ZNF609O15014 1411 aa10.13□□□□□ -0.79
SMAD9-203ENST00000399275 USP32Q8NFA0 1604 aa10.13□□□□□ -0.79
SMAD9-203ENST00000399275 PHF20L1A8MW92 1017 aa10.13□□□□□ -0.79
SMAD9-203ENST00000399275 KLHL18O94889 574 aa10.13□□□□□ -0.79
SMAD9-203ENST00000399275 NQO1P15559 274 aaKnown RBP10.13□□□□□ -0.79
SMAD9-203ENST00000399275 PRLRP16471 622 aa10.13□□□□□ -0.79
SMAD9-203ENST00000399275 CASP1P29466 404 aa10.13□□□□□ -0.79
SMAD9-203ENST00000399275 RGS2P41220 211 aa10.13□□□□□ -0.79
SMAD9-203ENST00000399275 ATP2C1P98194 919 aaPredicted RBP10.13□□□□□ -0.79
SMAD9-203ENST00000399275 OCRLQ01968 901 aa10.13□□□□□ -0.79
SMAD9-203ENST00000399275 USP4Q13107 963 aa10.13□□□□□ -0.79
SMAD9-203ENST00000399275 DHX34Q14147 1143 aaKnown RBP10.13□□□□□ -0.79
SMAD9-203ENST00000399275 PAPD7Q5XG87 772 aaKnown RBP10.13□□□□□ -0.79
SMAD9-203ENST00000399275 SHQ1Q6PI26 577 aaKnown RBP10.13□□□□□ -0.79
SMAD9-203ENST00000399275 TTC33Q6PID6 262 aaPredicted RBP10.13□□□□□ -0.79
SMAD9-203ENST00000399275 DPH6Q7L8W6 267 aa10.13□□□□□ -0.79
SMAD9-203ENST00000399275 JDP2Q8WYK2 163 aa10.13□□□□□ -0.79
SMAD9-203ENST00000399275 STRBPQ96SI9 672 aaKnown RBP10.13□□□□□ -0.79
SMAD9-203ENST00000399275 MLXIPLQ9NP71 852 aa10.13□□□□□ -0.79
SMAD9-203ENST00000399275 MAP3K15Q6ZN16 1313 aa10.13□□□□□ -0.79
SMAD9-203ENST00000399275 LINC00854A0A1B0GVQ3 168 aa10.13□□□□□ -0.79
SMAD9-203ENST00000399275 SSU72P8A0A1W2PR75 194 aa10.13□□□□□ -0.79
SMAD9-203ENST00000399275 PYGMP11217 842 aa10.13□□□□□ -0.79
SMAD9-203ENST00000399275 RFC5P40937 340 aa10.13□□□□□ -0.79
SMAD9-203ENST00000399275 CCNHP51946 323 aaPredicted RBP10.13□□□□□ -0.79
SMAD9-203ENST00000399275 ABATP80404 500 aa10.13□□□□□ -0.79
SMAD9-203ENST00000399275 ORC2Q13416 577 aaPredicted RBP10.13□□□□□ -0.79
SMAD9-203ENST00000399275 CCSAPQ6IQ19 270 aaPredicted RBP10.13□□□□□ -0.79
SMAD9-203ENST00000399275 TTC17Q96AE7 1141 aa10.13□□□□□ -0.79
SMAD9-203ENST00000399275 XPO6Q96QU8 1125 aaKnown RBP10.13□□□□□ -0.79
SMAD9-203ENST00000399275 CCDC59Q9P031 241 aaKnown RBP10.13□□□□□ -0.79
SMAD9-203ENST00000399275 TRIM43BA6NCK2 446 aa10.13□□□□□ -0.79
SMAD9-203ENST00000399275 PJA2O43164 708 aa10.13□□□□□ -0.79
SMAD9-203ENST00000399275 PDE9AO76083 593 aa10.13□□□□□ -0.79
SMAD9-203ENST00000399275 IGKV5-2P06315 115 aa10.13□□□□□ -0.79
SMAD9-203ENST00000399275 CDH3P22223 829 aa10.13□□□□□ -0.79
SMAD9-203ENST00000399275 IFNA8P32881 189 aa10.13□□□□□ -0.79
SMAD9-203ENST00000399275 PPARGP37231 505 aaPredicted RBP10.13□□□□□ -0.79
SMAD9-203ENST00000399275 HIF1AQ16665 826 aa10.13□□□□□ -0.79
SMAD9-203ENST00000399275 CLEC4GQ6UXB4 293 aa10.13□□□□□ -0.79
SMAD9-203ENST00000399275 ANKRD36BP1Q96IX9 119 aa10.13□□□□□ -0.79
SMAD9-203ENST00000399275 NDNQ99608 321 aa10.13□□□□□ -0.79
SMAD9-203ENST00000399275 STK39Q9UEW8 545 aa10.13□□□□□ -0.79
SMAD9-203ENST00000399275 LRCH1Q9Y2L9 728 aa10.13□□□□□ -0.79
SMAD9-203ENST00000399275 NEDD4P46934 1319 aa10.13□□□□□ -0.79
SMAD9-203ENST00000399275 KLHL41O60662 606 aa10.12□□□□□ -0.79
SMAD9-203ENST00000399275 MTRF1O75570 445 aaKnown RBP10.12□□□□□ -0.79
SMAD9-203ENST00000399275 ACSL3O95573 720 aa10.12□□□□□ -0.79
SMAD9-203ENST00000399275 CDC25AP30304 524 aa10.12□□□□□ -0.79
SMAD9-203ENST00000399275 CHRNA3P32297 505 aa10.12□□□□□ -0.79
SMAD9-203ENST00000399275 CYP2J2P51589 502 aa10.12□□□□□ -0.79
SMAD9-203ENST00000399275 COPS2P61201 443 aa10.12□□□□□ -0.79
SMAD9-203ENST00000399275 CYP4A11Q02928 519 aa10.12□□□□□ -0.79
SMAD9-203ENST00000399275 CYP4A22Q5TCH4 519 aa10.12□□□□□ -0.79
SMAD9-203ENST00000399275 VPS37AQ8NEZ2 397 aa10.12□□□□□ -0.79
SMAD9-203ENST00000399275 CDV3Q9UKY7 258 aaKnown RBP10.12□□□□□ -0.79
SMAD9-203ENST00000399275 CORO1CQ9ULV4 474 aaPredicted RBP10.12□□□□□ -0.79
SMAD9-203ENST00000399275 FDPSP14324 419 aaKnown RBP10.12□□□□□ -0.79
SMAD9-203ENST00000399275 BRAFP15056 766 aa10.12□□□□□ -0.79
SMAD9-203ENST00000399275 FOSL1P15407 271 aa10.12□□□□□ -0.79
SMAD9-203ENST00000399275 SCTRP47872 440 aa10.12□□□□□ -0.79
SMAD9-203ENST00000399275 PSMC6P62333 389 aa10.12□□□□□ -0.79
SMAD9-203ENST00000399275 LRRC14Q15048 493 aa10.12□□□□□ -0.79
SMAD9-203ENST00000399275 CDC37Q16543 378 aaPredicted RBP10.12□□□□□ -0.79
SMAD9-203ENST00000399275 FRMPD1Q5SYB0 1578 aa10.12□□□□□ -0.79
SMAD9-203ENST00000399275 ARMC4Q5T2S8 1044 aa10.12□□□□□ -0.79
SMAD9-203ENST00000399275 FAM45BPQ6NSW5 357 aa10.12□□□□□ -0.79
SMAD9-203ENST00000399275 RAPH1Q70E73 1250 aa10.12□□□□□ -0.79
SMAD9-203ENST00000399275 KRT74Q7RTS7 529 aa10.12□□□□□ -0.79
SMAD9-203ENST00000399275 LRRN4CLQ8ND94 238 aa10.12□□□□□ -0.79
SMAD9-203ENST00000399275 PIGOQ8TEQ8 1089 aa10.12□□□□□ -0.79
SMAD9-203ENST00000399275 KCTD4Q8WVF5 259 aa10.12□□□□□ -0.79
SMAD9-203ENST00000399275 SMYD2Q9NRG4 433 aa10.12□□□□□ -0.79
SMAD9-203ENST00000399275 SFMBT1Q9UHJ3 866 aa10.12□□□□□ -0.79
SMAD9-203ENST00000399275 A0A1W2PRG6 482 aa10.12□□□□□ -0.79
SMAD9-203ENST00000399275 CNOT3O75175 753 aaKnown RBP10.12□□□□□ -0.79
SMAD9-203ENST00000399275 GGPS1O95749 300 aa10.12□□□□□ -0.79
SMAD9-203ENST00000399275 ANXA13P27216 316 aa10.12□□□□□ -0.79
SMAD9-203ENST00000399275 SERPINH1P50454 418 aaKnown RBP10.12□□□□□ -0.79
SMAD9-203ENST00000399275 OTUD4Q01804 1114 aaKnown RBP10.12□□□□□ -0.79
SMAD9-203ENST00000399275 PDAP1Q13442 181 aaKnown RBP10.12□□□□□ -0.79
SMAD9-203ENST00000399275 NCAPHQ15003 741 aa10.12□□□□□ -0.79
SMAD9-203ENST00000399275 LRRC41Q15345 812 aa10.12□□□□□ -0.79
SMAD9-203ENST00000399275 SGSM1Q2NKQ1 1148 aa10.12□□□□□ -0.79
SMAD9-203ENST00000399275 IRGCQ6NXR0 463 aa10.12□□□□□ -0.79
SMAD9-203ENST00000399275 PPP1R2P3Q6NXS1 205 aa10.12□□□□□ -0.79
SMAD9-203ENST00000399275 LAYNQ6UX15 382 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms