RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 ACOT2P49753 483 aa5.27□□□□□ -1.57
SMAD4-202ENST00000398417 ITGA8P53708 1063 aa5.27□□□□□ -1.57
SMAD4-202ENST00000398417 SYCP2LQ5T4T6 812 aa5.27□□□□□ -1.57
SMAD4-202ENST00000398417 IZUMO3Q5VZ72 239 aa5.27□□□□□ -1.57
SMAD4-202ENST00000398417 SCYL2Q6P3W7 929 aa5.27□□□□□ -1.57
SMAD4-202ENST00000398417 TTC27Q6P3X3 843 aa5.27□□□□□ -1.57
SMAD4-202ENST00000398417 ANKMY2Q8IV38 441 aa5.27□□□□□ -1.57
SMAD4-202ENST00000398417 RMDN3Q96TC7 470 aa5.27□□□□□ -1.57
SMAD4-202ENST00000398417 RPAP3Q9H6T3 665 aaPredicted RBP5.27□□□□□ -1.57
SMAD4-202ENST00000398417 TBC1D22BQ9NU19 505 aa5.27□□□□□ -1.57
SMAD4-202ENST00000398417 SEL1LQ9UBV2 794 aa5.27□□□□□ -1.57
SMAD4-202ENST00000398417 WDR91A4D1P6 747 aa5.27□□□□□ -1.57
SMAD4-202ENST00000398417 SPDYE2BA6NHP3 402 aa5.27□□□□□ -1.57
SMAD4-202ENST00000398417 SLC26A4O43511 780 aa5.27□□□□□ -1.57
SMAD4-202ENST00000398417 DKC1O60832 514 aaKnown RBP eCLIP5.27□□□□□ -1.57
SMAD4-202ENST00000398417 HLA-DRAP01903 254 aa5.27□□□□□ -1.57
SMAD4-202ENST00000398417 SPDYE6P0CI01 402 aa5.27□□□□□ -1.57
SMAD4-202ENST00000398417 BRD2P25440 801 aaKnown RBP5.27□□□□□ -1.57
SMAD4-202ENST00000398417 POLGP54098 1239 aaPredicted RBP5.27□□□□□ -1.57
SMAD4-202ENST00000398417 FAM182AQ5T1J6 154 aa5.27□□□□□ -1.57
SMAD4-202ENST00000398417 C6orf118Q5T5N4 469 aa5.27□□□□□ -1.57
SMAD4-202ENST00000398417 NUGGCQ68CJ6 796 aa5.27□□□□□ -1.57
SMAD4-202ENST00000398417 SNRNP48Q6IEG0 339 aaKnown RBP5.27□□□□□ -1.57
SMAD4-202ENST00000398417 OR6B2Q6IFH4 312 aa5.27□□□□□ -1.57
SMAD4-202ENST00000398417 CDR2LQ86X02 465 aaPredicted RBP5.27□□□□□ -1.57
SMAD4-202ENST00000398417 CD302Q8IX05 232 aa5.27□□□□□ -1.57
SMAD4-202ENST00000398417 IWS1Q96ST2 819 aa5.27□□□□□ -1.57
SMAD4-202ENST00000398417 TCRBV7S2A1N4TA0A589 114 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 LRRD1A4D1F6 860 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 SLC29A2Q14542 456 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 KAT2BQ92831 832 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 KLF6Q99612 283 aaPredicted RBP5.26□□□□□ -1.57
SMAD4-202ENST00000398417 HSD17B14Q9BPX1 270 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 ADAM22Q9P0K1 906 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 STXBP5LQ9Y2K9 1186 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 TNFRSF8P28908 595 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 CLNS1AP54105 237 aaKnown RBP5.26□□□□□ -1.57
SMAD4-202ENST00000398417 EIF3BP55884 814 aaKnown RBP5.26□□□□□ -1.57
SMAD4-202ENST00000398417 SLC20A2Q08357 652 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 DHX34Q14147 1143 aaKnown RBP5.26□□□□□ -1.57
SMAD4-202ENST00000398417 BBS9Q3SYG4 887 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 CROCCP2Q86T23 111 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 LRRC57Q8N9N7 239 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 SYTL5Q8TDW5 730 aaPredicted RBP5.26□□□□□ -1.57
SMAD4-202ENST00000398417 AGO4Q9HCK5 861 aaKnown RBP5.26□□□□□ -1.57
SMAD4-202ENST00000398417 GRIN2DO15399 1336 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 FAM208AQ9UK61 1670 aaKnown RBP5.26□□□□□ -1.57
SMAD4-202ENST00000398417 GOLGA8MH3BSY2 632 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 CLTAP09496 248 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 BRAFP15056 766 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 NOVP48745 357 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 DMP1Q13316 513 aaPredicted RBP5.26□□□□□ -1.57
SMAD4-202ENST00000398417 ITGB3BPQ13352 177 aaPredicted RBP5.26□□□□□ -1.57
SMAD4-202ENST00000398417 MIS18BP1Q6P0N0 1132 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 KCNV2Q8TDN2 545 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 MBOAT7Q96N66 472 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 PRDM5Q9NQX1 630 aaPredicted RBP5.26□□□□□ -1.57
SMAD4-202ENST00000398417 GINM1Q9NU53 330 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 NXF1Q9UBU9 619 aaKnown RBP5.26□□□□□ -1.57
SMAD4-202ENST00000398417 YDJCA8MPS7 323 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 BTNL10A8MVZ5 291 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 WDR64B1ANS9 1081 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 PEX10O60683 326 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 AGTP01019 485 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 NPTX2P47972 431 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 CLUL1Q15846 466 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 SNRNP35Q16560 246 aaKnown RBP5.26□□□□□ -1.57
SMAD4-202ENST00000398417 TMEM270Q6UE05 265 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 PARP9Q8IXQ6 854 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 IQCKQ8N0W5 287 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 ANKS4BQ8N8V4 417 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 FBXL13Q8NEE6 735 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 WNT8AQ9H1J5 351 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 ECT2Q9H8V3 914 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 ATP6V0A4Q9HBG4 840 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 AS3MTQ9HBK9 375 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 HOMER3Q9NSC5 361 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 NINJ2Q9NZG7 142 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 NINQ8N4C6 2090 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 ANKRD12Q6UB98 2062 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 RPS6KA5O75582 802 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 GAS8O95995 478 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 PYGMP11217 842 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 ATP5DP30049 168 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 KRT76Q01546 638 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 ADCY2Q08462 1091 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 MTMR2Q13614 643 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 SETDB1Q15047 1291 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 TKFCQ3LXA3 575 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 ACAD10Q6JQN1 1059 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 PPP1R21Q6ZMI0 780 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 RBBP8NLQ8NC74 664 aaPredicted RBP5.26□□□□□ -1.57
SMAD4-202ENST00000398417 SEMA4DQ92854 862 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 OLFML3Q9NRN5 406 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 INTUQ9ULD6 942 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 ANXA13P27216 316 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 JAK3P52333 1124 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 KIF22Q14807 665 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 ARHGAP27Q6ZUM4 889 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 SAMD7Q7Z3H4 446 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms