RNA–Protein interactions for RNA: ENST00000398005.3

HMGN2P39-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 39, humanhuman

BASIC

Gene HMGN2P39, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P39-201ENST00000398005 CTSSP25774 331 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 SDHAP31040 664 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 ATICP31939 592 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 GJA4P35212 333 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 ACTN2P35609 894 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 WASP42768 502 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 MCAMP43121 646 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 HK3P52790 923 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 NR1H2P55055 460 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 CASP6P55212 293 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 RNASE9P60153 205 aaKnown RBP2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 ARF3P61204 181 aaPredicted RBP2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 NKX6-1P78426 367 aaPredicted RBP2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 ARF1P84077 181 aaKnown RBP2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 PLIN5Q00G26 463 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 SLC6A3Q01959 620 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 NRG1Q02297 640 aaPredicted RBP2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 TLE2Q04725 743 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 TNK2Q07912 1038 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 MAP3K12Q12852 859 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 SLC12A1Q13621 1099 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 LRP8Q14114 963 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 PTK2BQ14289 1009 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 PLS1Q14651 629 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 SMAD1Q15797 465 aaKnown RBP2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 ADRM1Q16186 407 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 KHDC1LQ5JSQ8 128 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 HABP4Q5JVS0 413 aaKnown RBP2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 FAM26FQ5R3K3 315 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 ANKRD34AQ69YU3 496 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 KIAA1841Q6NSI8 718 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 CYP4F22Q6NT55 531 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 CNKSR3Q6P9H4 555 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 KLHL17Q6TDP4 642 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 FAM180AQ6UWF9 173 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 PNPLA5Q7Z6Z6 429 aaPredicted RBP2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 RSPH3Q86UC2 560 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 KRTAP19-1Q8IUB9 90 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 CPOQ8IVL8 374 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 CCDC117Q8IWD4 279 aaPredicted RBP2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 RBM12BQ8IXT5 1001 aaKnown RBP2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 NDUFAF2Q8N183 169 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 ARL10Q8N8L6 244 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 LINC00116Q8NCU8 138 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 CCDC150Q8NCX0 1101 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 SIMC1Q8NDZ2 872 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 FLCNQ8NFG4 579 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 OR10H5Q8NGA6 315 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 UHMK1Q8TAS1 419 aaKnown RBP2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 FAM71BQ8TC56 605 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 STYXQ8WUJ0 223 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 FBLIM1Q8WUP2 373 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 RSAD2Q8WXG1 361 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 GOLGA1Q92805 767 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 RAB24Q969Q5 203 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 RILPL2Q969X0 211 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 LRRC46Q96FV0 321 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 VMP1Q96GC9 406 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 RADILQ96JH8 1075 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 CDHR1Q96JP9 859 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 CLPTM1LQ96KA5 538 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 FAM167AQ96KS9 214 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 SNX22Q96L94 193 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 GBP4Q96PP9 640 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 KCNC2Q96PR1 638 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 MPHOSPH8Q99549 860 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 VRK1Q99986 396 aaPredicted RBP2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 EIF2AQ9BY44 585 aaKnown RBP2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 GPR62Q9BZJ7 368 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 SEMA6CQ9H3T2 930 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 ACSS3Q9H6R3 686 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 RC3H2Q9HBD1 1191 aaKnown RBP2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 SEPSECSQ9HD40 501 aaKnown RBP2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 SLC6A20Q9NP91 592 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 SAYSD1Q9NPB0 183 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 TPSG1Q9NRR2 321 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 TM7SF3Q9NS93 570 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 KCND1Q9NSA2 647 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 TDP1Q9NUW8 608 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 CFDP1Q9UEE9 299 aaPredicted RBP2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 NIPSNAP3AQ9UFN0 247 aaPredicted RBP2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 ABCF2Q9UG63 623 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 FEZ2Q9UHY8 353 aaPredicted RBP2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 PRSS50Q9UI38 385 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 VPS28Q9UK41 221 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 FEM1BQ9UK73 627 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 PCDHA6Q9UN73 950 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 PCDHB1Q9Y5F3 818 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 SNX5Q9Y5X3 404 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 CDY2AQ9Y6F7 541 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 MYPNQ86TC9 1320 aa2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 SETD1BQ9UPS6 1966 aaKnown RBP2.4□□□□□ -2.03
HMGN2P39-201ENST00000398005 CCDC196A0A1B0GTZ2 297 aa2.39□□□□□ -2.03
HMGN2P39-201ENST00000398005 PRAMEF22A3QJZ6 481 aa2.39□□□□□ -2.03
HMGN2P39-201ENST00000398005 PI4KAP2A4QPH2 592 aa2.39□□□□□ -2.03
HMGN2P39-201ENST00000398005 FAM90A27PA6NNH2 459 aa2.39□□□□□ -2.03
HMGN2P39-201ENST00000398005 GNAT3A8MTJ3 354 aa2.39□□□□□ -2.03
HMGN2P39-201ENST00000398005 FAM171A2A8MVW0 826 aa2.39□□□□□ -2.03
HMGN2P39-201ENST00000398005 PRR33A8MZF0 331 aa2.39□□□□□ -2.03
HMGN2P39-201ENST00000398005 PIP5K1BO14986 540 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms