RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 KCNT2Q6UVM3 1135 aa23.18■■□□□ 1.3
TSPAN4-206ENST00000397408 ZNF280BQ86YH2 543 aa23.18■■□□□ 1.3
TSPAN4-206ENST00000397408 THNSL1Q8IYQ7 743 aa23.18■■□□□ 1.3
TSPAN4-206ENST00000397408 GLIS3Q8NEA6 775 aa23.18■■□□□ 1.3
TSPAN4-206ENST00000397408 ACCSQ96QU6 501 aa23.18■■□□□ 1.3
TSPAN4-206ENST00000397408 HAPLN2Q9GZV7 340 aa23.18■■□□□ 1.3
TSPAN4-206ENST00000397408 IKZF4Q9H2S9 585 aa23.18■■□□□ 1.3
TSPAN4-206ENST00000397408 MIOSQ9NXC5 875 aa23.18■■□□□ 1.3
TSPAN4-206ENST00000397408 STXBP5LQ9Y2K9 1186 aa23.18■■□□□ 1.3
TSPAN4-206ENST00000397408 PRRC2BQ5JSZ5 2229 aaKnown RBP23.17■■□□□ 1.3
TSPAN4-206ENST00000397408 B4GALT3O60512 393 aa23.17■■□□□ 1.3
TSPAN4-206ENST00000397408 MYL1P05976 194 aa23.17■■□□□ 1.3
TSPAN4-206ENST00000397408 PRR29P0C7W0 189 aa23.17■■□□□ 1.3
TSPAN4-206ENST00000397408 BCAR1P56945 870 aa23.17■■□□□ 1.3
TSPAN4-206ENST00000397408 EHHADHQ08426 723 aa23.17■■□□□ 1.3
TSPAN4-206ENST00000397408 STXBP4Q6ZWJ1 553 aa23.17■■□□□ 1.3
TSPAN4-206ENST00000397408 GSTCDQ8NEC7 633 aa23.17■■□□□ 1.3
TSPAN4-206ENST00000397408 ENGASEQ8NFI3 743 aa23.17■■□□□ 1.3
TSPAN4-206ENST00000397408 FAM193BQ96PV7 902 aaPredicted RBP23.17■■□□□ 1.3
TSPAN4-206ENST00000397408 EXOC7Q9UPT5 735 aa23.17■■□□□ 1.3
TSPAN4-206ENST00000397408 TDRD15B5MCY1 1934 aaKnown RBP23.17■■□□□ 1.3
TSPAN4-206ENST00000397408 TISP43B9A030 160 aa23.16■■□□□ 1.3
TSPAN4-206ENST00000397408 GRM6O15303 877 aa23.16■■□□□ 1.3
TSPAN4-206ENST00000397408 KLRC4O43908 158 aa23.16■■□□□ 1.3
TSPAN4-206ENST00000397408 GADD45BO75293 160 aaPredicted RBP23.16■■□□□ 1.3
TSPAN4-206ENST00000397408 DDHD2O94830 711 aa23.16■■□□□ 1.3
TSPAN4-206ENST00000397408 PRPF6O94906 941 aaKnown RBP23.16■■□□□ 1.3
TSPAN4-206ENST00000397408 ITGB1P05556 798 aa23.16■■□□□ 1.3
TSPAN4-206ENST00000397408 YARSP54577 528 aaKnown RBP23.16■■□□□ 1.3
TSPAN4-206ENST00000397408 ALG13Q9NP73 1137 aaKnown RBP23.16■■□□□ 1.3
TSPAN4-206ENST00000397408 EXOC1Q9NV70 894 aa23.16■■□□□ 1.3
TSPAN4-206ENST00000397408 DNAJB4Q9UDY4 337 aa23.16■■□□□ 1.3
TSPAN4-206ENST00000397408 PLAGL2Q9UPG8 496 aa23.16■■□□□ 1.3
TSPAN4-206ENST00000397408 ANKRD63C9JTQ0 380 aa23.16■■□□□ 1.3
TSPAN4-206ENST00000397408 CSPG5O95196 566 aa23.16■■□□□ 1.3
TSPAN4-206ENST00000397408 PPM1AP35813 382 aa23.16■■□□□ 1.3
TSPAN4-206ENST00000397408 ALDH7A1P49419 539 aaKnown RBP23.16■■□□□ 1.3
TSPAN4-206ENST00000397408 GRIK3Q13003 919 aa23.16■■□□□ 1.3
TSPAN4-206ENST00000397408 SNW1Q13573 536 aaKnown RBP23.16■■□□□ 1.3
TSPAN4-206ENST00000397408 SEZ6Q53EL9 994 aa23.16■■□□□ 1.3
TSPAN4-206ENST00000397408 CCDC34Q96HJ3 373 aa23.16■■□□□ 1.3
TSPAN4-206ENST00000397408 CXCL16Q9H2A7 254 aa23.16■■□□□ 1.3
TSPAN4-206ENST00000397408 TOPORSQ9NS56 1045 aaPredicted RBP23.16■■□□□ 1.3
TSPAN4-206ENST00000397408 MTCH2Q9Y6C9 303 aa23.16■■□□□ 1.3
TSPAN4-206ENST00000397408 A0A0B4J269 797 aa23.15■■□□□ 1.3
TSPAN4-206ENST00000397408 NT5C1B-RDH14C9J2C7 533 aa23.15■■□□□ 1.3
TSPAN4-206ENST00000397408 PTGESO14684 152 aa23.15■■□□□ 1.3
TSPAN4-206ENST00000397408 FGF18O76093 207 aa23.15■■□□□ 1.3
TSPAN4-206ENST00000397408 SLC11A1P49279 550 aa23.15■■□□□ 1.3
TSPAN4-206ENST00000397408 KMT5BQ4FZB7 885 aa23.15■■□□□ 1.3
TSPAN4-206ENST00000397408 SYCP3Q8IZU3 236 aa23.15■■□□□ 1.3
TSPAN4-206ENST00000397408 SLC39A11Q8N1S5 342 aa23.15■■□□□ 1.3
TSPAN4-206ENST00000397408 MICALL1Q8N3F8 863 aa23.15■■□□□ 1.3
TSPAN4-206ENST00000397408 ACAP3Q96P50 834 aa23.15■■□□□ 1.3
TSPAN4-206ENST00000397408 MSTO1Q9BUK6 570 aa23.15■■□□□ 1.3
TSPAN4-206ENST00000397408 SLC39A2Q9NP94 309 aa23.15■■□□□ 1.3
TSPAN4-206ENST00000397408 SPG21Q9NZD8 308 aa23.15■■□□□ 1.3
TSPAN4-206ENST00000397408 PLXNA4Q9HCM2 1894 aa23.14■■□□□ 1.3
TSPAN4-206ENST00000397408 EIF3DO15371 548 aaKnown RBP eCLIP23.14■■□□□ 1.29
TSPAN4-206ENST00000397408 NR1I2O75469 434 aa23.14■■□□□ 1.29
TSPAN4-206ENST00000397408 RPN1P04843 607 aaKnown RBP23.14■■□□□ 1.29
TSPAN4-206ENST00000397408 GALTP07902 379 aa23.14■■□□□ 1.29
TSPAN4-206ENST00000397408 POU3F3P20264 500 aaPredicted RBP23.14■■□□□ 1.29
TSPAN4-206ENST00000397408 DSC1Q08554 894 aa23.14■■□□□ 1.29
TSPAN4-206ENST00000397408 DPYDQ12882 1025 aa23.14■■□□□ 1.29
TSPAN4-206ENST00000397408 PTPROQ16827 1216 aa23.14■■□□□ 1.29
TSPAN4-206ENST00000397408 GLRA4Q5JXX5 417 aa23.14■■□□□ 1.29
TSPAN4-206ENST00000397408 KANK3Q6NY19 840 aa23.14■■□□□ 1.29
TSPAN4-206ENST00000397408 EPM2AIP1Q7L775 607 aaPredicted RBP23.14■■□□□ 1.29
TSPAN4-206ENST00000397408 COLGALT2Q8IYK4 626 aa23.14■■□□□ 1.29
TSPAN4-206ENST00000397408 SPPL3Q8TCT6 385 aa23.14■■□□□ 1.29
TSPAN4-206ENST00000397408 SNX27Q96L92 541 aa23.14■■□□□ 1.29
TSPAN4-206ENST00000397408 TMEM175Q9BSA9 504 aa23.14■■□□□ 1.29
TSPAN4-206ENST00000397408 TMEM206Q9H813 350 aa23.14■■□□□ 1.29
TSPAN4-206ENST00000397408 MYO7AQ13402 2215 aa23.13■■□□□ 1.29
TSPAN4-206ENST00000397408 CITO14578 2027 aa23.13■■□□□ 1.29
TSPAN4-206ENST00000397408 OGTO15294 1046 aa23.13■■□□□ 1.29
TSPAN4-206ENST00000397408 POSTNQ15063 836 aa23.13■■□□□ 1.29
TSPAN4-206ENST00000397408 ZBTB41Q5SVQ8 909 aa23.13■■□□□ 1.29
TSPAN4-206ENST00000397408 SLFN12LQ6IEE8 588 aa23.13■■□□□ 1.29
TSPAN4-206ENST00000397408 TMEM173Q86WV6 379 aaPredicted RBP23.13■■□□□ 1.29
TSPAN4-206ENST00000397408 POF1BQ8WVV4 589 aa23.13■■□□□ 1.29
TSPAN4-206ENST00000397408 POMGNT1Q8WZA1 660 aa23.13■■□□□ 1.29
TSPAN4-206ENST00000397408 MRPL38Q96DV4 380 aaKnown RBP23.13■■□□□ 1.29
TSPAN4-206ENST00000397408 LMAN2LQ9H0V9 348 aa23.13■■□□□ 1.29
TSPAN4-206ENST00000397408 LMCD1Q9NZU5 365 aa23.13■■□□□ 1.29
TSPAN4-206ENST00000397408 STYXL1Q9Y6J8 313 aa23.13■■□□□ 1.29
TSPAN4-206ENST00000397408 TRIP11Q15643 1979 aa23.13■■□□□ 1.29
TSPAN4-206ENST00000397408 UBE4BO95155 1302 aa23.13■■□□□ 1.29
TSPAN4-206ENST00000397408 CARNS1A5YM72 827 aa23.12■■□□□ 1.29
TSPAN4-206ENST00000397408 FAM189A1O60320 539 aa23.12■■□□□ 1.29
TSPAN4-206ENST00000397408 THP07101 528 aa23.12■■□□□ 1.29
TSPAN4-206ENST00000397408 CLTAP09496 248 aa23.12■■□□□ 1.29
TSPAN4-206ENST00000397408 CXCL8P10145 99 aa23.12■■□□□ 1.29
TSPAN4-206ENST00000397408 DNAJB1P25685 340 aa23.12■■□□□ 1.29
TSPAN4-206ENST00000397408 TNFSF9P41273 254 aa23.12■■□□□ 1.29
TSPAN4-206ENST00000397408 OR1G1P47890 313 aa23.12■■□□□ 1.29
TSPAN4-206ENST00000397408 KYAT1Q16773 422 aa23.12■■□□□ 1.29
TSPAN4-206ENST00000397408 MAFAQ8NHW3 353 aaPredicted RBP23.12■■□□□ 1.29
TSPAN4-206ENST00000397408 TMEM169Q96HH4 297 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms