RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 WDR66Q8TBY9 1149 aa10.53□□□□□ -0.72
TRIM39-203ENST00000396547 KAT5Q92993 513 aa10.53□□□□□ -0.72
TRIM39-203ENST00000396547 TYW1Q9NV66 732 aaKnown RBP10.53□□□□□ -0.72
TRIM39-203ENST00000396547 PARP2Q9UGN5 583 aa10.53□□□□□ -0.72
TRIM39-203ENST00000396547 LRRD1A4D1F6 860 aa10.53□□□□□ -0.72
TRIM39-203ENST00000396547 ANKRD62A6NC57 917 aa10.53□□□□□ -0.72
TRIM39-203ENST00000396547 FAM196BA6NMK8 535 aa10.53□□□□□ -0.72
TRIM39-203ENST00000396547 MAP3K13O43283 966 aa10.53□□□□□ -0.72
TRIM39-203ENST00000396547 PIAS1O75925 651 aa10.53□□□□□ -0.72
TRIM39-203ENST00000396547 HOXA13P31271 388 aaPredicted RBP10.53□□□□□ -0.72
TRIM39-203ENST00000396547 FOXN2P32314 431 aa10.53□□□□□ -0.72
TRIM39-203ENST00000396547 NPEPPSP55786 919 aa10.53□□□□□ -0.72
TRIM39-203ENST00000396547 GSTO1P78417 241 aa10.53□□□□□ -0.72
TRIM39-203ENST00000396547 PPP2R5EQ16537 467 aa10.53□□□□□ -0.72
TRIM39-203ENST00000396547 MUM1Q2TAK8 710 aa10.53□□□□□ -0.72
TRIM39-203ENST00000396547 GALNTL6Q49A17 601 aa10.53□□□□□ -0.72
TRIM39-203ENST00000396547 C2CD6Q53TS8 623 aa10.53□□□□□ -0.72
TRIM39-203ENST00000396547 SGO2Q562F6 1265 aa10.53□□□□□ -0.72
TRIM39-203ENST00000396547 DAB2IPQ5VWQ8 1189 aa10.53□□□□□ -0.72
TRIM39-203ENST00000396547 TMEM154Q6P9G4 183 aa10.53□□□□□ -0.72
TRIM39-203ENST00000396547 GBP7Q8N8V2 638 aaPredicted RBP10.53□□□□□ -0.72
TRIM39-203ENST00000396547 SUPT20HQ8NEM7 779 aa10.53□□□□□ -0.72
TRIM39-203ENST00000396547 AGPAT1Q99943 283 aa10.53□□□□□ -0.72
TRIM39-203ENST00000396547 ANKRD2Q9GZV1 360 aa10.53□□□□□ -0.72
TRIM39-203ENST00000396547 DLGAP2Q9P1A6 1054 aa10.53□□□□□ -0.72
TRIM39-203ENST00000396547 CNOT7Q9UIV1 285 aaKnown RBP10.53□□□□□ -0.72
TRIM39-203ENST00000396547 TRAF3IP3Q9Y228 551 aa10.53□□□□□ -0.72
TRIM39-203ENST00000396547 RASA4BC9J798 803 aa10.52□□□□□ -0.73
TRIM39-203ENST00000396547 RASA4O43374 803 aa10.52□□□□□ -0.73
TRIM39-203ENST00000396547 UBXN2AP68543 259 aa10.52□□□□□ -0.73
TRIM39-203ENST00000396547 MYL7Q01449 175 aa10.52□□□□□ -0.73
TRIM39-203ENST00000396547 RRP1BQ14684 758 aaKnown RBP10.52□□□□□ -0.73
TRIM39-203ENST00000396547 PHLDB3Q6NSJ2 640 aa10.52□□□□□ -0.73
TRIM39-203ENST00000396547 C16orf86Q6ZW13 317 aa10.52□□□□□ -0.73
TRIM39-203ENST00000396547 LMNTD2Q8IXW0 634 aa10.52□□□□□ -0.73
TRIM39-203ENST00000396547 CKAP2Q8WWK9 683 aa10.52□□□□□ -0.73
TRIM39-203ENST00000396547 UTP4Q969X6 686 aaKnown RBP10.52□□□□□ -0.73
TRIM39-203ENST00000396547 ZSWIM1Q9BR11 485 aa10.52□□□□□ -0.73
TRIM39-203ENST00000396547 MTMR4Q9NYA4 1195 aa10.52□□□□□ -0.73
TRIM39-203ENST00000396547 CORO1CQ9ULV4 474 aaPredicted RBP10.52□□□□□ -0.73
TRIM39-203ENST00000396547 FRMD4BQ9Y2L6 1034 aa10.52□□□□□ -0.73
TRIM39-203ENST00000396547 SYNGAP1Q96PV0 1343 aa10.52□□□□□ -0.73
TRIM39-203ENST00000396547 ESYT2A0FGR8 921 aa10.52□□□□□ -0.73
TRIM39-203ENST00000396547 TISP43B9A030 160 aa10.52□□□□□ -0.73
TRIM39-203ENST00000396547 TGFB1I1O43294 461 aa10.52□□□□□ -0.73
TRIM39-203ENST00000396547 CETPP11597 493 aa10.52□□□□□ -0.73
TRIM39-203ENST00000396547 GCLMP48507 274 aa10.52□□□□□ -0.73
TRIM39-203ENST00000396547 ITGA8P53708 1063 aa10.52□□□□□ -0.73
TRIM39-203ENST00000396547 MTM1Q13496 603 aa10.52□□□□□ -0.73
TRIM39-203ENST00000396547 RBBP5Q15291 538 aaKnown RBP10.52□□□□□ -0.73
TRIM39-203ENST00000396547 C4orf33Q8N1A6 199 aa10.52□□□□□ -0.73
TRIM39-203ENST00000396547 TAB3Q8N5C8 712 aaPredicted RBP10.52□□□□□ -0.73
TRIM39-203ENST00000396547 ERMNQ8TAM6 284 aa10.52□□□□□ -0.73
TRIM39-203ENST00000396547 DTX3LQ8TDB6 740 aa10.52□□□□□ -0.73
TRIM39-203ENST00000396547 RUNDC3BQ96NL0 473 aa10.52□□□□□ -0.73
TRIM39-203ENST00000396547 RAB3IPQ96QF0 476 aaPredicted RBP10.52□□□□□ -0.73
TRIM39-203ENST00000396547 ANO3Q9BYT9 981 aa10.52□□□□□ -0.73
TRIM39-203ENST00000396547 KIAA1683Q9H0B3 1180 aa10.52□□□□□ -0.73
TRIM39-203ENST00000396547 DCTN4Q9UJW0 460 aa10.52□□□□□ -0.73
TRIM39-203ENST00000396547 NAALADL1Q9UQQ1 740 aa10.52□□□□□ -0.73
TRIM39-203ENST00000396547 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.52□□□□□ -0.73
TRIM39-203ENST00000396547 KIF3CO14782 793 aa10.51□□□□□ -0.73
TRIM39-203ENST00000396547 CHRNB2P17787 502 aa10.51□□□□□ -0.73
TRIM39-203ENST00000396547 RFC5P40937 340 aa10.51□□□□□ -0.73
TRIM39-203ENST00000396547 EPC2Q52LR7 807 aa10.51□□□□□ -0.73
TRIM39-203ENST00000396547 ANO7Q6IWH7 933 aa10.51□□□□□ -0.73
TRIM39-203ENST00000396547 CGB2Q6NT52 195 aa10.51□□□□□ -0.73
TRIM39-203ENST00000396547 SLC30A9Q6PML9 568 aa10.51□□□□□ -0.73
TRIM39-203ENST00000396547 EPM2AIP1Q7L775 607 aaPredicted RBP10.51□□□□□ -0.73
TRIM39-203ENST00000396547 APBB1IPQ7Z5R6 666 aaPredicted RBP10.51□□□□□ -0.73
TRIM39-203ENST00000396547 SLC13A5Q86YT5 568 aaPredicted RBP10.51□□□□□ -0.73
TRIM39-203ENST00000396547 LRRC37BQ96QE4 947 aa10.51□□□□□ -0.73
TRIM39-203ENST00000396547 RPS6KC1Q96S38 1066 aa10.51□□□□□ -0.73
TRIM39-203ENST00000396547 SH2D3AQ9BRG2 576 aa10.51□□□□□ -0.73
TRIM39-203ENST00000396547 ALG13Q9NP73 1137 aaKnown RBP10.51□□□□□ -0.73
TRIM39-203ENST00000396547 CHST7Q9NS84 486 aa10.51□□□□□ -0.73
TRIM39-203ENST00000396547 ANAPC5Q9UJX4 755 aa10.51□□□□□ -0.73
TRIM39-203ENST00000396547 TTC7AQ9ULT0 858 aaPredicted RBP10.51□□□□□ -0.73
TRIM39-203ENST00000396547 LUC7L3O95232 432 aaKnown RBP10.51□□□□□ -0.73
TRIM39-203ENST00000396547 SGPL1O95470 568 aa10.51□□□□□ -0.73
TRIM39-203ENST00000396547 NEFHP12036 1026 aa10.51□□□□□ -0.73
TRIM39-203ENST00000396547 ALADP13716 330 aa10.51□□□□□ -0.73
TRIM39-203ENST00000396547 INHBEP58166 350 aa10.51□□□□□ -0.73
TRIM39-203ENST00000396547 GPC5P78333 572 aa10.51□□□□□ -0.73
TRIM39-203ENST00000396547 DLG4P78352 724 aa10.51□□□□□ -0.73
TRIM39-203ENST00000396547 RNF220Q5VTB9 566 aa10.51□□□□□ -0.73
TRIM39-203ENST00000396547 HS2ST1Q7LGA3 356 aa10.51□□□□□ -0.73
TRIM39-203ENST00000396547 TEKT4Q8WW24 435 aa10.51□□□□□ -0.73
TRIM39-203ENST00000396547 NUP85Q9BW27 656 aa10.51□□□□□ -0.73
TRIM39-203ENST00000396547 DNAJC18Q9H819 358 aa10.51□□□□□ -0.73
TRIM39-203ENST00000396547 PKD2L1Q9P0L9 805 aa10.51□□□□□ -0.73
TRIM39-203ENST00000396547 DIS3Q9Y2L1 958 aaKnown RBP10.51□□□□□ -0.73
TRIM39-203ENST00000396547 RABGAP1Q9Y3P9 1069 aa10.51□□□□□ -0.73
TRIM39-203ENST00000396547 UNC5CO95185 931 aa10.51□□□□□ -0.73
TRIM39-203ENST00000396547 GM2AP17900 193 aa10.51□□□□□ -0.73
TRIM39-203ENST00000396547 KRT15P19012 456 aa10.51□□□□□ -0.73
TRIM39-203ENST00000396547 ORC2Q13416 577 aaPredicted RBP10.51□□□□□ -0.73
TRIM39-203ENST00000396547 ASPRV1Q53RT3 343 aa10.51□□□□□ -0.73
TRIM39-203ENST00000396547 BTNL9Q6UXG8 535 aa10.51□□□□□ -0.73
TRIM39-203ENST00000396547 MIGA2Q7L4E1 593 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms