RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 NKX2-3Q8TAU0 364 aa9.48□□□□□ -0.89
MSH5-205ENST00000395853 ZNF317Q96PQ6 595 aaPredicted RBP9.48□□□□□ -0.89
MSH5-205ENST00000395853 DDX50Q9BQ39 737 aaKnown RBP9.48□□□□□ -0.89
MSH5-205ENST00000395853 FAM129AQ9BZQ8 928 aa9.48□□□□□ -0.89
MSH5-205ENST00000395853 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.48□□□□□ -0.894e-14■■■□□ 19.1
MSH5-205ENST00000395853 CNOT10Q9H9A5 744 aaKnown RBP9.48□□□□□ -0.89
MSH5-205ENST00000395853 GUCA1BQ9UMX6 200 aa9.48□□□□□ -0.89
MSH5-205ENST00000395853 ZNF532Q9HCE3 1301 aa9.48□□□□□ -0.89
MSH5-205ENST00000395853 H7C1D1 291 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 SLC5A1P13866 664 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 PHBP35232 272 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 CCDC174Q6PII3 467 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 LVRNQ6Q4G3 990 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 LRIG3Q6UXM1 1119 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 B3GNT6Q6ZMB0 384 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 ANO5Q75V66 913 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 LURAP1LQ8IV03 231 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 RHOT2Q8IXI1 618 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 TOR1AIP2Q8NFQ8 470 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 BRSK1Q8TDC3 778 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 OSCP1Q8WVF1 389 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 SGCDQ92629 289 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 EGLN2Q96KS0 407 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 ELAC2Q9BQ52 826 aaKnown RBP9.47□□□□□ -0.89
MSH5-205ENST00000395853 INO80BQ9C086 356 aaPredicted RBP9.47□□□□□ -0.89
MSH5-205ENST00000395853 NSRP1Q9H0G5 558 aaKnown RBP9.47□□□□□ -0.89
MSH5-205ENST00000395853 CRNNQ9UBG3 495 aaPredicted RBP9.47□□□□□ -0.89
MSH5-205ENST00000395853 DENND2AQ9ULE3 1009 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 TRIM33Q9UPN9 1127 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 NR2E3Q9Y5X4 410 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 LAMB2P55268 1798 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 TCRBV5S4A2TA0A5A2 114 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 SH3PXD2BA1X283 911 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 H0Y3Z8 333 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 STRNO43815 780 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 UQCRFS1P1P0C7P4 283 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 PCP11498 1178 aaKnown RBP9.47□□□□□ -0.89
MSH5-205ENST00000395853 PDE6AP16499 860 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 PDIA3P30101 505 aaKnown RBP9.47□□□□□ -0.89
MSH5-205ENST00000395853 HMOX2P30519 316 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 ADD1P35611 737 aaKnown RBP9.47□□□□□ -0.89
MSH5-205ENST00000395853 SKIV2L2P42285 1042 aaKnown RBP9.47□□□□□ -0.89
MSH5-205ENST00000395853 BCAMP50895 628 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 NDUFA8P51970 172 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 RASGRF1Q13972 1273 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 TTF1Q15361 905 aaPredicted RBP9.47□□□□□ -0.89
MSH5-205ENST00000395853 ZNF423Q2M1K9 1284 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 NXNQ6DKJ4 435 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 DPP8Q6V1X1 898 aaPredicted RBP9.47□□□□□ -0.89
MSH5-205ENST00000395853 TMTC1Q8IUR5 882 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 IFT20Q8IY31 132 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 CHCHD4Q8N4Q1 142 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 SPATA5Q8NB90 893 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 LRRC8CQ8TDW0 803 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 SCG3Q8WXD2 468 aaKnown RBP9.47□□□□□ -0.89
MSH5-205ENST00000395853 DPF3Q92784 378 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 DCLRE1BQ9H816 532 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 CNOT8Q9UFF9 292 aaKnown RBP9.47□□□□□ -0.89
MSH5-205ENST00000395853 NOSIPQ9Y314 301 aaKnown RBP9.47□□□□□ -0.89
MSH5-205ENST00000395853 SQORQ9Y6N5 450 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 NEDD4P46934 1319 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 SMIM23A6NLE4 172 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 TMEM114B3SHH9 223 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 HSPA9P38646 679 aaKnown RBP9.47□□□□□ -0.89
MSH5-205ENST00000395853 IGHMBP2P38935 993 aaKnown RBP9.47□□□□□ -0.89
MSH5-205ENST00000395853 HIRAP54198 1017 aaPredicted RBP9.47□□□□□ -0.89
MSH5-205ENST00000395853 CHRNDQ07001 517 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 CCDC6Q16204 474 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 PARP6Q2NL67 630 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 RESP18Q5W5W9 173 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 RGMBQ6NW40 437 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 LLGL2Q6P1M3 1020 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 ZNF662Q6ZS27 426 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 ANKMY2Q8IV38 441 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 PLEKHO2Q8TD55 490 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 DGCR14Q96DF8 476 aaKnown RBP9.47□□□□□ -0.89
MSH5-205ENST00000395853 CCDC51Q96ER9 411 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 ASIC4Q96FT7 647 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 DYDC2Q96IM9 177 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 CDHR1Q96JP9 859 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 PLVAPQ9BX97 442 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 CRNKL1Q9BZJ0 848 aaKnown RBP9.47□□□□□ -0.89
MSH5-205ENST00000395853 ASCC2Q9H1I8 757 aaPredicted RBP9.47□□□□□ -0.89
MSH5-205ENST00000395853 CCDC177Q9NQR7 707 aaPredicted RBP9.47□□□□□ -0.89
MSH5-205ENST00000395853 DISC1Q9NRI5 854 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 DCAF16Q9NXF7 216 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 CLIC5Q9NZA1 410 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 STX8Q9UNK0 236 aa9.47□□□□□ -0.89
MSH5-205ENST00000395853 A0A088AWK7 358 aa9.46□□□□□ -0.89
MSH5-205ENST00000395853 A0A1W2PQ27 194 aa9.46□□□□□ -0.89
MSH5-205ENST00000395853 A0A1W2PQ64 194 aa9.46□□□□□ -0.89
MSH5-205ENST00000395853 A0A1W2PQD8 194 aa9.46□□□□□ -0.89
MSH5-205ENST00000395853 ZNF213O14771 459 aa9.46□□□□□ -0.89
MSH5-205ENST00000395853 ZNF185O15231 689 aa9.46□□□□□ -0.89
MSH5-205ENST00000395853 ZNF254O75437 659 aa9.46□□□□□ -0.89
MSH5-205ENST00000395853 S100BP04271 92 aaPredicted RBP9.46□□□□□ -0.89
MSH5-205ENST00000395853 EIF2B2P49770 351 aaKnown RBP9.46□□□□□ -0.89
MSH5-205ENST00000395853 HSD17B4P51659 736 aa9.46□□□□□ -0.89
MSH5-205ENST00000395853 HUNKP57058 714 aa9.46□□□□□ -0.89
MSH5-205ENST00000395853 ANTXR2P58335 489 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms