RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 PIN4Q9Y237 131 aaKnown RBP14.86□□□□□ -0.03
VAPB-202ENST00000395802 PITPNM1O00562 1244 aa14.85□□□□□ -0.03
VAPB-202ENST00000395802 ABLIM1O14639 778 aa14.85□□□□□ -0.03
VAPB-202ENST00000395802 IL18RAPO95256 599 aa14.85□□□□□ -0.03
VAPB-202ENST00000395802 PARNO95453 639 aaKnown RBP14.85□□□□□ -0.03
VAPB-202ENST00000395802 CTSHP09668 335 aa14.85□□□□□ -0.03
VAPB-202ENST00000395802 FMO5P49326 533 aa14.85□□□□□ -0.03
VAPB-202ENST00000395802 SLC39A5Q6ZMH5 540 aa14.85□□□□□ -0.03
VAPB-202ENST00000395802 ANKRD33Q7Z3H0 272 aa14.85□□□□□ -0.03
VAPB-202ENST00000395802 BRSK2Q8IWQ3 736 aa14.85□□□□□ -0.03
VAPB-202ENST00000395802 HACE1Q8IYU2 909 aa14.85□□□□□ -0.03
VAPB-202ENST00000395802 ZNF397Q8NF99 534 aaPredicted RBP14.85□□□□□ -0.03
VAPB-202ENST00000395802 TMEM40Q8WWA1 233 aa14.85□□□□□ -0.03
VAPB-202ENST00000395802 CCDC127Q96BQ5 260 aa14.85□□□□□ -0.03
VAPB-202ENST00000395802 CPB2Q96IY4 423 aa14.85□□□□□ -0.03
VAPB-202ENST00000395802 CCDC94Q9BW85 323 aaPredicted RBP14.85□□□□□ -0.03
VAPB-202ENST00000395802 TRPV6Q9H1D0 765 aa14.85□□□□□ -0.03
VAPB-202ENST00000395802 CPSF3Q9UKF6 684 aaKnown RBP14.85□□□□□ -0.03
VAPB-202ENST00000395802 USP20Q9Y2K6 914 aa14.85□□□□□ -0.03
VAPB-202ENST00000395802 DAAM1Q9Y4D1 1078 aa14.85□□□□□ -0.03
VAPB-202ENST00000395802 TTLL13PA6NNM8 815 aa14.85□□□□□ -0.03
VAPB-202ENST00000395802 CKBP12277 381 aa14.85□□□□□ -0.03
VAPB-202ENST00000395802 TNNI1P19237 187 aa14.85□□□□□ -0.03
VAPB-202ENST00000395802 HOXA11P31270 313 aaPredicted RBP14.85□□□□□ -0.03
VAPB-202ENST00000395802 YARSP54577 528 aaKnown RBP14.85□□□□□ -0.03
VAPB-202ENST00000395802 CLDN10P78369 228 aa14.85□□□□□ -0.03
VAPB-202ENST00000395802 PAK2Q13177 524 aa14.85□□□□□ -0.03
VAPB-202ENST00000395802 SYCP1Q15431 976 aa14.85□□□□□ -0.03
VAPB-202ENST00000395802 EXOC3L4Q17RC7 722 aa14.85□□□□□ -0.03
VAPB-202ENST00000395802 FIGNQ5HY92 759 aa14.85□□□□□ -0.03
VAPB-202ENST00000395802 KRT39Q6A163 491 aa14.85□□□□□ -0.03
VAPB-202ENST00000395802 CNGA4Q8IV77 575 aa14.85□□□□□ -0.03
VAPB-202ENST00000395802 THNSL1Q8IYQ7 743 aa14.85□□□□□ -0.03
VAPB-202ENST00000395802 CCDC150Q8NCX0 1101 aa14.85□□□□□ -0.03
VAPB-202ENST00000395802 ACAP3Q96P50 834 aa14.85□□□□□ -0.03
VAPB-202ENST00000395802 HAPLN2Q9GZV7 340 aa14.85□□□□□ -0.03
VAPB-202ENST00000395802 TMEM8AQ9HCN3 771 aa14.85□□□□□ -0.03
VAPB-202ENST00000395802 TOPORSQ9NS56 1045 aaPredicted RBP14.85□□□□□ -0.03
VAPB-202ENST00000395802 NOC2LQ9Y3T9 749 aaKnown RBP14.85□□□□□ -0.03
VAPB-202ENST00000395802 FAM189A1O60320 539 aa14.84□□□□□ -0.03
VAPB-202ENST00000395802 CD4P01730 458 aa14.84□□□□□ -0.03
VAPB-202ENST00000395802 ADRB2P07550 413 aa14.84□□□□□ -0.03
VAPB-202ENST00000395802 DLATP10515 647 aaKnown RBP14.84□□□□□ -0.03
VAPB-202ENST00000395802 MXI1P50539 228 aa14.84□□□□□ -0.03
VAPB-202ENST00000395802 MYL7Q01449 175 aa14.84□□□□□ -0.03
VAPB-202ENST00000395802 NFX1Q12986 1120 aaKnown RBP14.84□□□□□ -0.03
VAPB-202ENST00000395802 TRIM71Q2Q1W2 868 aaKnown RBP14.84□□□□□ -0.03
VAPB-202ENST00000395802 FBXO47Q5MNV8 452 aa14.84□□□□□ -0.03
VAPB-202ENST00000395802 CRELD2Q6UXH1 353 aaPredicted RBP14.84□□□□□ -0.03
VAPB-202ENST00000395802 FAM228AQ86W67 206 aa14.84□□□□□ -0.03
VAPB-202ENST00000395802 NT5DC4Q86YG4 428 aa14.84□□□□□ -0.03
VAPB-202ENST00000395802 NEK11Q8NG66 645 aa14.84□□□□□ -0.03
VAPB-202ENST00000395802 CACTINQ8WUQ7 758 aaKnown RBP14.84□□□□□ -0.03
VAPB-202ENST00000395802 DHX38Q92620 1227 aaKnown RBP14.84□□□□□ -0.03
VAPB-202ENST00000395802 WNT8BQ93098 351 aa14.84□□□□□ -0.03
VAPB-202ENST00000395802 TSPAN18Q96SJ8 248 aa14.84□□□□□ -0.03
VAPB-202ENST00000395802 EDEM3Q9BZQ6 932 aa14.84□□□□□ -0.03
VAPB-202ENST00000395802 ASB7Q9H672 318 aa14.84□□□□□ -0.03
VAPB-202ENST00000395802 MMRN2Q9H8L6 949 aa14.84□□□□□ -0.03
VAPB-202ENST00000395802 PLEKHA5Q9HAU0 1116 aa14.84□□□□□ -0.03
VAPB-202ENST00000395802 ST3GAL5Q9UNP4 418 aa14.84□□□□□ -0.03
VAPB-202ENST00000395802 TULP1O00294 542 aaPredicted RBP14.83□□□□□ -0.04
VAPB-202ENST00000395802 PQBP1O60828 265 aaKnown RBP14.83□□□□□ -0.04
VAPB-202ENST00000395802 TRIM49P0CI25 452 aa14.83□□□□□ -0.04
VAPB-202ENST00000395802 TRIM49CP0CI26 452 aa14.83□□□□□ -0.04
VAPB-202ENST00000395802 STAG3L1P0CL83 205 aa14.83□□□□□ -0.04
VAPB-202ENST00000395802 COL6A1P12109 1028 aa14.83□□□□□ -0.04
VAPB-202ENST00000395802 SKIP12755 728 aa14.83□□□□□ -0.04
VAPB-202ENST00000395802 SELPP16109 830 aa14.83□□□□□ -0.04
VAPB-202ENST00000395802 FGFR4P22455 802 aa14.83□□□□□ -0.04
VAPB-202ENST00000395802 MSNP26038 577 aaKnown RBP14.83□□□□□ -0.04
VAPB-202ENST00000395802 GRM5P41594 1212 aa14.83□□□□□ -0.04
VAPB-202ENST00000395802 TSR1Q2NL82 804 aaKnown RBP14.83□□□□□ -0.04
VAPB-202ENST00000395802 ZNF618Q5T7W0 954 aa14.83□□□□□ -0.04
VAPB-202ENST00000395802 EEF1DP3Q658K8 133 aa14.83□□□□□ -0.04
VAPB-202ENST00000395802 TWF2Q6IBS0 349 aaKnown RBP14.83□□□□□ -0.04
VAPB-202ENST00000395802 NECAB2Q7Z6G3 386 aa14.83□□□□□ -0.04
VAPB-202ENST00000395802 WDR49Q8IV35 697 aa14.83□□□□□ -0.04
VAPB-202ENST00000395802 LRRC8AQ8IWT6 810 aa14.83□□□□□ -0.04
VAPB-202ENST00000395802 C11orf49Q9H6J7 331 aa14.83□□□□□ -0.04
VAPB-202ENST00000395802 LRRIQ3A6PVS8 624 aaPredicted RBP14.82□□□□□ -0.04
VAPB-202ENST00000395802 RFX1P22670 979 aa14.82□□□□□ -0.04
VAPB-202ENST00000395802 RAB27AP51159 221 aa14.82□□□□□ -0.04
VAPB-202ENST00000395802 ARID5BQ14865 1188 aa14.82□□□□□ -0.04
VAPB-202ENST00000395802 PTPN21Q16825 1174 aa14.82□□□□□ -0.04
VAPB-202ENST00000395802 DUOXA2Q1HG44 320 aa14.82□□□□□ -0.04
VAPB-202ENST00000395802 FMNL3Q8IVF7 1028 aa14.82□□□□□ -0.04
VAPB-202ENST00000395802 FAM81BQ96LP2 452 aa14.82□□□□□ -0.04
VAPB-202ENST00000395802 CGRRF1Q99675 332 aa14.82□□□□□ -0.04
VAPB-202ENST00000395802 NUCKS1Q9H1E3 243 aaKnown RBP14.82□□□□□ -0.04
VAPB-202ENST00000395802 PLCB1Q9NQ66 1216 aa14.82□□□□□ -0.04
VAPB-202ENST00000395802 RRAGDQ9NQL2 400 aaPredicted RBP14.82□□□□□ -0.04
VAPB-202ENST00000395802 GCNT4Q9P109 453 aa14.82□□□□□ -0.04
VAPB-202ENST00000395802 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.82□□□□□ -0.04
VAPB-202ENST00000395802 DNAH12Q6ZR08 3092 aa14.82□□□□□ -0.04
VAPB-202ENST00000395802 A0A1W2PQJ5 194 aa14.82□□□□□ -0.04
VAPB-202ENST00000395802 AKR1B15C9JRZ8 316 aaPredicted RBP14.82□□□□□ -0.04
VAPB-202ENST00000395802 NPTXRO95502 500 aa14.82□□□□□ -0.04
VAPB-202ENST00000395802 GCLMP48507 274 aa14.82□□□□□ -0.04
VAPB-202ENST00000395802 DLG4P78352 724 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms