RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 SFMBT2Q5VUG0 894 aa16.41■□□□□ 0.22
SCAF11-204ENST00000395454 INTS8Q75QN2 995 aaKnown RBP16.41■□□□□ 0.22
SCAF11-204ENST00000395454 ANKRD33Q7Z3H0 272 aa16.41■□□□□ 0.22
SCAF11-204ENST00000395454 EHBP1Q8NDI1 1231 aa16.41■□□□□ 0.22
SCAF11-204ENST00000395454 PRPF31Q8WWY3 499 aaKnown RBP16.41■□□□□ 0.22
SCAF11-204ENST00000395454 BSNDQ8WZ55 320 aa16.41■□□□□ 0.22
SCAF11-204ENST00000395454 WNT8BQ93098 351 aa16.41■□□□□ 0.22
SCAF11-204ENST00000395454 ZNF668Q96K58 619 aaPredicted RBP16.41■□□□□ 0.22
SCAF11-204ENST00000395454 TUBB2BQ9BVA1 445 aa16.41■□□□□ 0.22
SCAF11-204ENST00000395454 TBX20Q9UMR3 447 aa16.41■□□□□ 0.22
SCAF11-204ENST00000395454 EXOC7Q9UPT5 735 aa16.41■□□□□ 0.22
SCAF11-204ENST00000395454 GINS2Q9Y248 185 aa16.41■□□□□ 0.22
SCAF11-204ENST00000395454 DCDC2CA8MYV0 355 aa16.4■□□□□ 0.22
SCAF11-204ENST00000395454 SLC16A4O15374 487 aa16.4■□□□□ 0.22
SCAF11-204ENST00000395454 TLR3O15455 904 aaKnown RBP16.4■□□□□ 0.22
SCAF11-204ENST00000395454 SLC9A1P19634 815 aa16.4■□□□□ 0.22
SCAF11-204ENST00000395454 ANXA13P27216 316 aa16.4■□□□□ 0.22
SCAF11-204ENST00000395454 EIF4A3P38919 411 aaKnown RBP16.4■□□□□ 0.22
SCAF11-204ENST00000395454 FMO5P49326 533 aa16.4■□□□□ 0.22
SCAF11-204ENST00000395454 CYP2J2P51589 502 aa16.4■□□□□ 0.22
SCAF11-204ENST00000395454 JAM2P57087 298 aa16.4■□□□□ 0.22
SCAF11-204ENST00000395454 TLE2Q04725 743 aa16.4■□□□□ 0.22
SCAF11-204ENST00000395454 PTK7Q13308 1070 aa16.4■□□□□ 0.22
SCAF11-204ENST00000395454 MXD4Q14582 209 aaPredicted RBP16.4■□□□□ 0.22
SCAF11-204ENST00000395454 ZNF710Q8N1W2 664 aa16.4■□□□□ 0.22
SCAF11-204ENST00000395454 ASAP3Q8TDY4 903 aa16.4■□□□□ 0.22
SCAF11-204ENST00000395454 IFT74Q96LB3 600 aa16.4■□□□□ 0.22
SCAF11-204ENST00000395454 NLRP4Q96MN2 994 aa16.4■□□□□ 0.22
SCAF11-204ENST00000395454 TSGA10Q9BZW7 698 aa16.4■□□□□ 0.22
SCAF11-204ENST00000395454 ARHGAP28Q9P2N2 729 aa16.4■□□□□ 0.22
SCAF11-204ENST00000395454 H0YCG3 227 aa16.39■□□□□ 0.21
SCAF11-204ENST00000395454 P4HA2O15460 535 aa16.39■□□□□ 0.21
SCAF11-204ENST00000395454 PJA2O43164 708 aa16.39■□□□□ 0.21
SCAF11-204ENST00000395454 EXOC3O60645 756 aa16.39■□□□□ 0.21
SCAF11-204ENST00000395454 CD4P01730 458 aa16.39■□□□□ 0.21
SCAF11-204ENST00000395454 GLRA2P23416 452 aa16.39■□□□□ 0.21
SCAF11-204ENST00000395454 THPOP40225 353 aa16.39■□□□□ 0.21
SCAF11-204ENST00000395454 PRKCIP41743 596 aa16.39■□□□□ 0.21
SCAF11-204ENST00000395454 LAMTOR4Q0VGL1 99 aa16.39■□□□□ 0.21
SCAF11-204ENST00000395454 ZNF569Q5MCW4 686 aa16.39■□□□□ 0.21
SCAF11-204ENST00000395454 RSPH3Q86UC2 560 aa16.39■□□□□ 0.21
SCAF11-204ENST00000395454 XXYLT1Q8NBI6 393 aa16.39■□□□□ 0.21
SCAF11-204ENST00000395454 FBXL18Q96ME1 805 aa16.39■□□□□ 0.21
SCAF11-204ENST00000395454 SCLT1Q96NL6 688 aa16.39■□□□□ 0.21
SCAF11-204ENST00000395454 TOX2Q96NM4 488 aa16.39■□□□□ 0.21
SCAF11-204ENST00000395454 NLRC4Q9NPP4 1024 aa16.39■□□□□ 0.21
SCAF11-204ENST00000395454 GCNT4Q9P109 453 aa16.39■□□□□ 0.21
SCAF11-204ENST00000395454 USP20Q9Y2K6 914 aa16.39■□□□□ 0.21
SCAF11-204ENST00000395454 RCCD1A6NED2 376 aa16.39■□□□□ 0.21
SCAF11-204ENST00000395454 CCDC169A6NNP5 214 aa16.39■□□□□ 0.21
SCAF11-204ENST00000395454 KRT86O43790 486 aa16.39■□□□□ 0.21
SCAF11-204ENST00000395454 URI1O94763 535 aaPredicted RBP16.39■□□□□ 0.21
SCAF11-204ENST00000395454 SRGAP2CP0DJJ0 459 aa16.39■□□□□ 0.21
SCAF11-204ENST00000395454 APBA1Q02410 837 aa16.39■□□□□ 0.21
SCAF11-204ENST00000395454 SPA17Q15506 151 aa16.39■□□□□ 0.21
SCAF11-204ENST00000395454 TCERG1LQ5VWI1 586 aa16.39■□□□□ 0.21
SCAF11-204ENST00000395454 RNF149Q8NC42 400 aa16.39■□□□□ 0.21
SCAF11-204ENST00000395454 TSC1Q92574 1164 aa16.39■□□□□ 0.21
SCAF11-204ENST00000395454 DHX38Q92620 1227 aaKnown RBP16.39■□□□□ 0.21
SCAF11-204ENST00000395454 CBWD1Q9BRT8 395 aa16.39■□□□□ 0.21
SCAF11-204ENST00000395454 LACRTQ9GZZ8 138 aa16.39■□□□□ 0.21
SCAF11-204ENST00000395454 HSPBP1Q9NZL4 362 aa16.39■□□□□ 0.21
SCAF11-204ENST00000395454 ATP8B3O60423 1300 aa16.39■□□□□ 0.21
SCAF11-204ENST00000395454 ADGRA3Q8IWK6 1321 aa16.39■□□□□ 0.21
SCAF11-204ENST00000395454 LRRIQ4A6NIV6 560 aa16.38■□□□□ 0.21
SCAF11-204ENST00000395454 M0QZ92 97 aa16.38■□□□□ 0.21
SCAF11-204ENST00000395454 CTSHP09668 335 aa16.38■□□□□ 0.21
SCAF11-204ENST00000395454 RFX1P22670 979 aa16.38■□□□□ 0.21
SCAF11-204ENST00000395454 NLRP11P59045 1033 aaKnown RBP16.38■□□□□ 0.21
SCAF11-204ENST00000395454 FAAP100Q0VG06 881 aa16.38■□□□□ 0.21
SCAF11-204ENST00000395454 CAPSQ13938 189 aa16.38■□□□□ 0.21
SCAF11-204ENST00000395454 KIZQ2M2Z5 673 aa16.38■□□□□ 0.21
SCAF11-204ENST00000395454 IRF2BP2Q7Z5L9 587 aa16.38■□□□□ 0.21
SCAF11-204ENST00000395454 SLC35F6Q8N357 371 aa16.38■□□□□ 0.21
SCAF11-204ENST00000395454 NME8Q8N427 588 aa16.38■□□□□ 0.21
SCAF11-204ENST00000395454 NLRP7Q8WX94 980 aa16.38■□□□□ 0.21
SCAF11-204ENST00000395454 JAKMIP2Q96AA8 810 aa16.38■□□□□ 0.21
SCAF11-204ENST00000395454 KIFC3Q9BVG8 833 aa16.38■□□□□ 0.21
SCAF11-204ENST00000395454 KMT5AQ9NQR1 393 aa16.38■□□□□ 0.21
SCAF11-204ENST00000395454 FHOD1Q9Y613 1164 aa16.38■□□□□ 0.21
SCAF11-204ENST00000395454 BZW2Q9Y6E2 419 aaKnown RBP16.38■□□□□ 0.21
SCAF11-204ENST00000395454 DENND3A2RUS2 1198 aa16.37■□□□□ 0.21
SCAF11-204ENST00000395454 TISP43B9A030 160 aa16.37■□□□□ 0.21
SCAF11-204ENST00000395454 ASAP2O43150 1006 aa16.37■□□□□ 0.21
SCAF11-204ENST00000395454 ACTN1P12814 892 aa16.37■□□□□ 0.21
SCAF11-204ENST00000395454 ADSSP30520 456 aa16.37■□□□□ 0.21
SCAF11-204ENST00000395454 GPC3P51654 580 aa16.37■□□□□ 0.21
SCAF11-204ENST00000395454 C1orf220Q5T0J3 134 aa16.37■□□□□ 0.21
SCAF11-204ENST00000395454 CCDC122Q5T0U0 273 aa16.37■□□□□ 0.21
SCAF11-204ENST00000395454 KIAA1328Q86T90 577 aa16.37■□□□□ 0.21
SCAF11-204ENST00000395454 IFIH1Q9BYX4 1025 aaKnown RBP16.37■□□□□ 0.21
SCAF11-204ENST00000395454 TRIM10Q9UDY6 481 aa16.37■□□□□ 0.21
SCAF11-204ENST00000395454 PCDHA13Q9Y5I0 950 aa16.37■□□□□ 0.21
SCAF11-204ENST00000395454 LAMA2P24043 3122 aaKnown RBP16.37■□□□□ 0.21
SCAF11-204ENST00000395454 CTAGE9A4FU28 777 aa16.37■□□□□ 0.21
SCAF11-204ENST00000395454 AKR1B10O60218 316 aa16.37■□□□□ 0.21
SCAF11-204ENST00000395454 N4BP1O75113 896 aaKnown RBP16.37■□□□□ 0.21
SCAF11-204ENST00000395454 RPLP2P05387 115 aaKnown RBP16.37■□□□□ 0.21
SCAF11-204ENST00000395454 AMPD2Q01433 879 aa16.37■□□□□ 0.21
SCAF11-204ENST00000395454 CYP27A1Q02318 531 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms