RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 NT5DC1Q5TFE4 455 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 ANKRD20A3Q5VUR7 823 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 OLFML2BQ68BL8 750 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 ZNF746Q6NUN9 644 aaPredicted RBP6.07□□□□□ -1.44
RFFL-202ENST00000394597 PEX26Q7Z412 305 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 HAUS6Q7Z4H7 955 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 DNAJC9Q8WXX5 260 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 OPTNQ96CV9 577 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 CDCA5Q96FF9 252 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 CHP1Q99653 195 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 PDCD2LQ9BRP1 358 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 BEGAINQ9BUH8 593 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 UBXN6Q9BZV1 441 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 DNAJC18Q9H819 358 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 PXMP2Q9NR77 195 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 ANKEF1Q9NU02 776 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 DENND3A2RUS2 1198 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 FAM86B1E9PN63 330 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 FZD9O00144 591 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 FAM86B2P0C5J1 330 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 TMEM191BP0C7N4 346 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 P4HA1P13674 534 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 ATP4AP20648 1035 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 CTNNA2P26232 953 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 CA8P35219 290 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 VPS41P49754 854 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 HUNKP57058 714 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 ACCSLQ4AC99 568 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 FRMD5Q7Z6J6 570 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 APLFQ8IW19 511 aaPredicted RBP6.07□□□□□ -1.44
RFFL-202ENST00000394597 PDCD7Q8N8D1 485 aaKnown RBP6.07□□□□□ -1.44
RFFL-202ENST00000394597 FAXDC2Q96IV6 333 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 FAM81BQ96LP2 452 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 MIS12Q9H081 205 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 ZCWPW1Q9H0M4 648 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 KIAA1586Q9HCI6 787 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 GCNT4Q9P109 453 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 DMGDHQ9UI17 866 aaKnown RBP6.07□□□□□ -1.44
RFFL-202ENST00000394597 CORO1CQ9ULV4 474 aaPredicted RBP6.07□□□□□ -1.44
RFFL-202ENST00000394597 FZD1Q9UP38 647 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 C2CD2Q9Y426 696 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 ZNF541Q9H0D2 1346 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 CYP3A7-CYP3A51PA0A087WV96 503 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 A0A087X0B3 334 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 GOLGA8IPA6NC78 632 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 GOLGA8JA6NMD2 632 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 FTCDO95954 541 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 PYGLP06737 847 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 H2AFZP0C0S5 128 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 CYP3A7P24462 503 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 EIF3BP55884 814 aaKnown RBP6.07□□□□□ -1.44
RFFL-202ENST00000394597 USP4Q13107 963 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 VGLL4Q14135 290 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 NCAPHQ15003 741 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 RINT1Q6NUQ1 792 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 CATSPERGQ6ZRH7 1159 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 H2AFVQ71UI9 128 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 NIPA1Q7RTP0 329 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 HACE1Q8IYU2 909 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 SYCE1Q8N0S2 351 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 NME8Q8N427 588 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 CYP2W1Q8TAV3 490 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 ZC3H15Q8WU90 426 aaKnown RBP6.07□□□□□ -1.44
RFFL-202ENST00000394597 GMLQ99445 158 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 MROH8Q9H579 483 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 GBA2Q9HCG7 927 aaPredicted RBP6.07□□□□□ -1.44
RFFL-202ENST00000394597 CHMP2BQ9UQN3 213 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 ANKRD36CQ5JPF3 1778 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 ATRNL1Q5VV63 1379 aa6.06□□□□□ -1.44
RFFL-202ENST00000394597 SERPING1P05155 500 aa6.06□□□□□ -1.44
RFFL-202ENST00000394597 CD44P16070 742 aaKnown RBP6.06□□□□□ -1.44
RFFL-202ENST00000394597 CIITAP33076 1130 aa6.06□□□□□ -1.44
RFFL-202ENST00000394597 CARSP49589 748 aaKnown RBP6.06□□□□□ -1.44
RFFL-202ENST00000394597 MXI1P50539 228 aa6.06□□□□□ -1.44
RFFL-202ENST00000394597 BPIFB4P59827 614 aa6.06□□□□□ -1.44
RFFL-202ENST00000394597 ELF3P78545 371 aaPredicted RBP6.06□□□□□ -1.44
RFFL-202ENST00000394597 SKOR1P84550 965 aa6.06□□□□□ -1.44
RFFL-202ENST00000394597 MDM2Q00987 491 aaPredicted RBP6.06□□□□□ -1.44
RFFL-202ENST00000394597 SURF1Q15526 300 aa6.06□□□□□ -1.44
RFFL-202ENST00000394597 TAF1CQ15572 869 aaPredicted RBP6.06□□□□□ -1.44
RFFL-202ENST00000394597 EDRF1Q3B7T1 1238 aa6.06□□□□□ -1.44
RFFL-202ENST00000394597 SH3RF1Q7Z6J0 888 aa6.06□□□□□ -1.44
RFFL-202ENST00000394597 OR2W6PQ8NHA6 318 aa6.06□□□□□ -1.44
RFFL-202ENST00000394597 PSPC1Q8WXF1 523 aaKnown RBP6.06□□□□□ -1.44
RFFL-202ENST00000394597 KLRG1Q96E93 195 aa6.06□□□□□ -1.44
RFFL-202ENST00000394597 PNMA5Q96PV4 448 aa6.06□□□□□ -1.44
RFFL-202ENST00000394597 P2RX7Q99572 595 aaKnown RBP6.06□□□□□ -1.44
RFFL-202ENST00000394597 SPATC1LQ9H0A9 340 aa6.06□□□□□ -1.44
RFFL-202ENST00000394597 POLR3FQ9H1D9 316 aaPredicted RBP6.06□□□□□ -1.44
RFFL-202ENST00000394597 AGO4Q9HCK5 861 aaKnown RBP6.06□□□□□ -1.44
RFFL-202ENST00000394597 SNX12Q9UMY4 172 aa6.06□□□□□ -1.44
RFFL-202ENST00000394597 LTBP3Q9NS15 1303 aa6.06□□□□□ -1.44
RFFL-202ENST00000394597 EME2A4GXA9 379 aaPredicted RBP6.06□□□□□ -1.44
RFFL-202ENST00000394597 LMNAP02545 664 aaKnown RBP6.06□□□□□ -1.44
RFFL-202ENST00000394597 PLS3P13797 630 aa6.06□□□□□ -1.44
RFFL-202ENST00000394597 EIF4A3P38919 411 aaKnown RBP6.06□□□□□ -1.44
RFFL-202ENST00000394597 PIK3CAP42336 1068 aa6.06□□□□□ -1.44
RFFL-202ENST00000394597 YARSP54577 528 aaKnown RBP6.06□□□□□ -1.44
RFFL-202ENST00000394597 ADCY1Q08828 1119 aa6.06□□□□□ -1.44
RFFL-202ENST00000394597 CUL1Q13616 776 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms