RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 PLCB4Q15147 1175 aa21.66■■□□□ 1.06
PTPN11-202ENST00000392597 ZNF792Q3KQV3 632 aa21.66■■□□□ 1.06
PTPN11-202ENST00000392597 CFAP221Q4G0U5 840 aa21.66■■□□□ 1.06
PTPN11-202ENST00000392597 CCDC70Q6NSX1 233 aa21.66■■□□□ 1.06
PTPN11-202ENST00000392597 ARMCX2Q7L311 632 aa21.66■■□□□ 1.06
PTPN11-202ENST00000392597 PRPF31Q8WWY3 499 aaKnown RBP21.66■■□□□ 1.06
PTPN11-202ENST00000392597 BRI3BPQ8WY22 251 aa21.66■■□□□ 1.06
PTPN11-202ENST00000392597 CTNNBL1Q8WYA6 563 aaPredicted RBP21.66■■□□□ 1.06
PTPN11-202ENST00000392597 RUBCNQ92622 972 aa21.66■■□□□ 1.06
PTPN11-202ENST00000392597 FNBP1Q96RU3 617 aa21.66■■□□□ 1.06
PTPN11-202ENST00000392597 ARID3AQ99856 593 aa21.66■■□□□ 1.06
PTPN11-202ENST00000392597 ANKRD62A6NC57 917 aa21.65■■□□□ 1.06
PTPN11-202ENST00000392597 ZBTB42B2RXF5 422 aa21.65■■□□□ 1.06
PTPN11-202ENST00000392597 BTBD19C9JJ37 291 aa21.65■■□□□ 1.06
PTPN11-202ENST00000392597 GCNT1Q02742 428 aa21.65■■□□□ 1.06
PTPN11-202ENST00000392597 PRPF4BQ13523 1007 aaKnown RBP21.65■■□□□ 1.06
PTPN11-202ENST00000392597 ZNF467Q7Z7K2 595 aaPredicted RBP21.65■■□□□ 1.06
PTPN11-202ENST00000392597 SPATA4Q8NEY3 305 aa21.65■■□□□ 1.06
PTPN11-202ENST00000392597 VTA1Q9NP79 307 aa21.65■■□□□ 1.06
PTPN11-202ENST00000392597 ADGRA2Q96PE1 1338 aa21.65■■□□□ 1.06
PTPN11-202ENST00000392597 CXCR5P32302 372 aa21.64■■□□□ 1.06
PTPN11-202ENST00000392597 NLRP11P59045 1033 aaKnown RBP21.64■■□□□ 1.06
PTPN11-202ENST00000392597 CRELD2Q6UXH1 353 aaPredicted RBP21.64■■□□□ 1.06
PTPN11-202ENST00000392597 KRT222Q8N1A0 295 aa21.64■■□□□ 1.06
PTPN11-202ENST00000392597 EPS8L1Q8TE68 723 aa21.64■■□□□ 1.06
PTPN11-202ENST00000392597 KAT5Q92993 513 aa21.64■■□□□ 1.06
PTPN11-202ENST00000392597 TARS2Q9BW92 718 aaKnown RBP21.64■■□□□ 1.06
PTPN11-202ENST00000392597 HBP1O60381 514 aa21.64■■□□□ 1.05
PTPN11-202ENST00000392597 SEC31AO94979 1220 aaKnown RBP21.64■■□□□ 1.05
PTPN11-202ENST00000392597 TBC1D8O95759 1140 aa21.64■■□□□ 1.05
PTPN11-202ENST00000392597 MARK3P27448 753 aa21.64■■□□□ 1.05
PTPN11-202ENST00000392597 VSNL1P62760 191 aa21.64■■□□□ 1.05
PTPN11-202ENST00000392597 HTRA3P83110 453 aa21.64■■□□□ 1.05
PTPN11-202ENST00000392597 SREBF2Q12772 1141 aa21.64■■□□□ 1.05
PTPN11-202ENST00000392597 GRM1Q13255 1194 aa21.64■■□□□ 1.05
PTPN11-202ENST00000392597 TCEAL1Q15170 157 aa21.64■■□□□ 1.05
PTPN11-202ENST00000392597 RPS6KA1Q15418 735 aa21.64■■□□□ 1.05
PTPN11-202ENST00000392597 LONRF2Q1L5Z9 754 aa21.64■■□□□ 1.05
PTPN11-202ENST00000392597 ZACNQ401N2 412 aa21.64■■□□□ 1.05
PTPN11-202ENST00000392597 TRIM50Q86XT4 487 aa21.64■■□□□ 1.05
PTPN11-202ENST00000392597 MSTO1Q9BUK6 570 aa21.64■■□□□ 1.05
PTPN11-202ENST00000392597 HAPLN2Q9GZV7 340 aa21.64■■□□□ 1.05
PTPN11-202ENST00000392597 CCDC113Q9H0I3 377 aa21.64■■□□□ 1.05
PTPN11-202ENST00000392597 ISCUQ9H1K1 167 aa21.64■■□□□ 1.05
PTPN11-202ENST00000392597 C2orf40Q9H1Z8 148 aa21.64■■□□□ 1.05
PTPN11-202ENST00000392597 NOCTQ9UK39 431 aaKnown RBP21.64■■□□□ 1.05
PTPN11-202ENST00000392597 RBM47A0AV96 593 aaKnown RBP21.63■■□□□ 1.05
PTPN11-202ENST00000392597 SPDYE4A6NLX3 237 aa21.63■■□□□ 1.05
PTPN11-202ENST00000392597 KIF4AO95239 1232 aa21.63■■□□□ 1.05
PTPN11-202ENST00000392597 GZMAP12544 262 aa21.63■■□□□ 1.05
PTPN11-202ENST00000392597 ADORA2AP29274 412 aa21.63■■□□□ 1.05
PTPN11-202ENST00000392597 LAMTOR4Q0VGL1 99 aa21.63■■□□□ 1.05
PTPN11-202ENST00000392597 LAMC2Q13753 1193 aa21.63■■□□□ 1.05
PTPN11-202ENST00000392597 SLC20A1Q8WUM9 679 aa21.63■■□□□ 1.05
PTPN11-202ENST00000392597 TAF4BQ92750 862 aa21.63■■□□□ 1.05
PTPN11-202ENST00000392597 PBKQ96KB5 322 aa21.63■■□□□ 1.05
PTPN11-202ENST00000392597 PSMB7Q99436 277 aa21.63■■□□□ 1.05
PTPN11-202ENST00000392597 MRPL4Q9BYD3 311 aaKnown RBP21.63■■□□□ 1.05
PTPN11-202ENST00000392597 HADHBP55084 474 aaKnown RBP21.62■■□□□ 1.05
PTPN11-202ENST00000392597 C2orf54Q08AI8 447 aa21.62■■□□□ 1.05
PTPN11-202ENST00000392597 MKRN4PQ13434 485 aaPredicted RBP21.62■■□□□ 1.05
PTPN11-202ENST00000392597 DRP2Q13474 957 aa21.62■■□□□ 1.05
PTPN11-202ENST00000392597 BEND6Q5SZJ8 279 aaPredicted RBP21.62■■□□□ 1.05
PTPN11-202ENST00000392597 DNAAF5Q86Y56 855 aa21.62■■□□□ 1.05
PTPN11-202ENST00000392597 ZBTB8OSQ8IWT0 167 aa21.62■■□□□ 1.05
PTPN11-202ENST00000392597 RPUSD2Q8IZ73 545 aaKnown RBP21.62■■□□□ 1.05
PTPN11-202ENST00000392597 ZNF516Q92618 1163 aa21.62■■□□□ 1.05
PTPN11-202ENST00000392597 PDGFCQ9NRA1 345 aa21.62■■□□□ 1.05
PTPN11-202ENST00000392597 SEPT11Q9NVA2 429 aaKnown RBP21.62■■□□□ 1.05
PTPN11-202ENST00000392597 RBAKQ9NYW8 714 aaPredicted RBP21.62■■□□□ 1.05
PTPN11-202ENST00000392597 SUCLA2Q9P2R7 463 aaPredicted RBP21.62■■□□□ 1.05
PTPN11-202ENST00000392597 MSCO60682 206 aa21.62■■□□□ 1.05
PTPN11-202ENST00000392597 C4BPAP04003 597 aaKnown RBP21.62■■□□□ 1.05
PTPN11-202ENST00000392597 USP8P40818 1118 aa21.62■■□□□ 1.05
PTPN11-202ENST00000392597 ACOT2P49753 483 aa21.62■■□□□ 1.05
PTPN11-202ENST00000392597 ARHGAP1Q07960 439 aa21.62■■□□□ 1.05
PTPN11-202ENST00000392597 TAPT1Q6NXT6 567 aa21.62■■□□□ 1.05
PTPN11-202ENST00000392597 RHOT2Q8IXI1 618 aa21.62■■□□□ 1.05
PTPN11-202ENST00000392597 REM2Q8IYK8 340 aaPredicted RBP21.62■■□□□ 1.05
PTPN11-202ENST00000392597 SLC35G2Q8TBE7 412 aa21.62■■□□□ 1.05
PTPN11-202ENST00000392597 COPS5Q92905 334 aa21.62■■□□□ 1.05
PTPN11-202ENST00000392597 EMID1Q96A84 441 aaPredicted RBP21.62■■□□□ 1.05
PTPN11-202ENST00000392597 ZBTB45Q96K62 511 aaPredicted RBP21.62■■□□□ 1.05
PTPN11-202ENST00000392597 CGRRF1Q99675 332 aa21.62■■□□□ 1.05
PTPN11-202ENST00000392597 PTPN18Q99952 460 aa21.62■■□□□ 1.05
PTPN11-202ENST00000392597 ZCCHC17Q9NP64 241 aaKnown RBP21.62■■□□□ 1.05
PTPN11-202ENST00000392597 C1orf112Q9NSG2 853 aa21.62■■□□□ 1.05
PTPN11-202ENST00000392597 ERAP1Q9NZ08 941 aa21.62■■□□□ 1.05
PTPN11-202ENST00000392597 ANKFY1Q9P2R3 1169 aa21.62■■□□□ 1.05
PTPN11-202ENST00000392597 IVNS1ABPQ9Y6Y0 642 aa21.62■■□□□ 1.05
PTPN11-202ENST00000392597 RTN2O75298 545 aa21.61■■□□□ 1.05
PTPN11-202ENST00000392597 TOM1L1O75674 476 aa21.61■■□□□ 1.05
PTPN11-202ENST00000392597 SGPL1O95470 568 aa21.61■■□□□ 1.05
PTPN11-202ENST00000392597 TNNI1P19237 187 aa21.61■■□□□ 1.05
PTPN11-202ENST00000392597 PALB2Q86YC2 1186 aa21.61■■□□□ 1.05
PTPN11-202ENST00000392597 FUT8Q9BYC5 575 aa21.61■■□□□ 1.05
PTPN11-202ENST00000392597 SUGCTQ9HAC7 445 aa21.61■■□□□ 1.05
PTPN11-202ENST00000392597 TRPC6Q9Y210 931 aa21.61■■□□□ 1.05
PTPN11-202ENST00000392597 STXBP5LQ9Y2K9 1186 aa21.61■■□□□ 1.05
PTPN11-202ENST00000392597 CEP350Q5VT06 3117 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms