RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 ZNF473Q8WTR7 871 aaKnown RBP13.22□□□□□ -0.29
RFC5-201ENST00000392542 MAGOHBQ96A72 148 aaKnown RBP13.22□□□□□ -0.29
RFC5-201ENST00000392542 CEP170P1Q96L14 293 aa13.22□□□□□ -0.29
RFC5-201ENST00000392542 UVRAGQ9P2Y5 699 aa13.22□□□□□ -0.29
RFC5-201ENST00000392542 SNX24Q9Y343 169 aa13.22□□□□□ -0.29
RFC5-201ENST00000392542 COL11A1P12107 1806 aaPredicted RBP13.22□□□□□ -0.29
RFC5-201ENST00000392542 TULP1O00294 542 aaPredicted RBP13.22□□□□□ -0.29
RFC5-201ENST00000392542 MAFGO15525 162 aa13.22□□□□□ -0.29
RFC5-201ENST00000392542 ZNF862O60290 1169 aa13.22□□□□□ -0.29
RFC5-201ENST00000392542 DKC1O60832 514 aaKnown RBP eCLIP13.22□□□□□ -0.29
RFC5-201ENST00000392542 STBD1O95210 358 aa13.22□□□□□ -0.29
RFC5-201ENST00000392542 NR3C2P08235 984 aa13.22□□□□□ -0.29
RFC5-201ENST00000392542 GBP1P32455 592 aa13.22□□□□□ -0.29
RFC5-201ENST00000392542 ZNF280AP59817 542 aaPredicted RBP13.22□□□□□ -0.29
RFC5-201ENST00000392542 ENPEPQ07075 957 aa13.22□□□□□ -0.29
RFC5-201ENST00000392542 TADA2BQ86TJ2 420 aa13.22□□□□□ -0.29
RFC5-201ENST00000392542 ZDHHC14Q8IZN3 488 aa13.22□□□□□ -0.29
RFC5-201ENST00000392542 POMGNT1Q8WZA1 660 aa13.22□□□□□ -0.29
RFC5-201ENST00000392542 DDX1Q92499 740 aaKnown RBP13.22□□□□□ -0.29
RFC5-201ENST00000392542 ATP6V0A1Q93050 837 aa13.22□□□□□ -0.29
RFC5-201ENST00000392542 WNK4Q96J92 1243 aa13.22□□□□□ -0.29
RFC5-201ENST00000392542 NOVA2Q9UNW9 492 aaKnown RBP13.22□□□□□ -0.29
RFC5-201ENST00000392542 RIPK3Q9Y572 518 aa13.22□□□□□ -0.29
RFC5-201ENST00000392542 PCDHA3Q9Y5H8 950 aa13.22□□□□□ -0.29
RFC5-201ENST00000392542 PODXLO00592 558 aa13.21□□□□□ -0.29
RFC5-201ENST00000392542 SPOPO43791 374 aa13.21□□□□□ -0.29
RFC5-201ENST00000392542 EGFRP00533 1210 aa13.21□□□□□ -0.29
RFC5-201ENST00000392542 PYGMP11217 842 aa13.21□□□□□ -0.29
RFC5-201ENST00000392542 PLTPP55058 493 aa13.21□□□□□ -0.29
RFC5-201ENST00000392542 SOX10P56693 466 aa13.21□□□□□ -0.29
RFC5-201ENST00000392542 IFFO1Q0D2I5 559 aa13.21□□□□□ -0.29
RFC5-201ENST00000392542 CYP1B1Q16678 543 aa13.21□□□□□ -0.29
RFC5-201ENST00000392542 TTC27Q6P3X3 843 aa13.21□□□□□ -0.29
RFC5-201ENST00000392542 SV2AQ7L0J3 742 aa13.21□□□□□ -0.29
RFC5-201ENST00000392542 SLC13A5Q86YT5 568 aaPredicted RBP13.21□□□□□ -0.29
RFC5-201ENST00000392542 GPD1LQ8N335 351 aa13.21□□□□□ -0.29
RFC5-201ENST00000392542 MYCBPAPQ8TBZ2 947 aa13.21□□□□□ -0.29
RFC5-201ENST00000392542 BTBD6Q96KE9 485 aa13.21□□□□□ -0.29
RFC5-201ENST00000392542 CCT8L2Q96SF2 557 aa13.21□□□□□ -0.29
RFC5-201ENST00000392542 TMEM51Q9NW97 253 aa13.21□□□□□ -0.29
RFC5-201ENST00000392542 GRHL1Q9NZI5 618 aa13.21□□□□□ -0.29
RFC5-201ENST00000392542 ADGRA3Q8IWK6 1321 aa13.21□□□□□ -0.29
RFC5-201ENST00000392542 RLFQ13129 1914 aa13.21□□□□□ -0.29
RFC5-201ENST00000392542 CPP00450 1065 aa13.21□□□□□ -0.3
RFC5-201ENST00000392542 NUDT17P0C025 328 aa13.21□□□□□ -0.3
RFC5-201ENST00000392542 KCNA2P16389 499 aa13.21□□□□□ -0.3
RFC5-201ENST00000392542 GARTP22102 1010 aa13.21□□□□□ -0.3
RFC5-201ENST00000392542 SEC24CP53992 1094 aa13.21□□□□□ -0.3
RFC5-201ENST00000392542 PMS2P54278 862 aa13.21□□□□□ -0.3
RFC5-201ENST00000392542 ODF2Q5BJF6 829 aa13.21□□□□□ -0.3
RFC5-201ENST00000392542 ACAD10Q6JQN1 1059 aa13.21□□□□□ -0.3
RFC5-201ENST00000392542 CCDC137Q6PK04 289 aaKnown RBP13.21□□□□□ -0.3
RFC5-201ENST00000392542 CPNE8Q86YQ8 564 aa13.21□□□□□ -0.3
RFC5-201ENST00000392542 MCPH1Q8NEM0 835 aa13.21□□□□□ -0.3
RFC5-201ENST00000392542 FBXO25Q8TCJ0 367 aa13.21□□□□□ -0.3
RFC5-201ENST00000392542 DHX38Q92620 1227 aaKnown RBP13.21□□□□□ -0.3
RFC5-201ENST00000392542 TATDN2Q93075 761 aa13.21□□□□□ -0.3
RFC5-201ENST00000392542 RUNDC3BQ96NL0 473 aa13.21□□□□□ -0.3
RFC5-201ENST00000392542 EPB41L4BQ9H329 900 aa13.21□□□□□ -0.3
RFC5-201ENST00000392542 PARP2Q9UGN5 583 aa13.21□□□□□ -0.3
RFC5-201ENST00000392542 MTUS1Q9ULD2 1270 aa13.21□□□□□ -0.3
RFC5-201ENST00000392542 PHIPQ8WWQ0 1821 aa13.21□□□□□ -0.3
RFC5-201ENST00000392542 DOCK5Q9H7D0 1870 aa13.2□□□□□ -0.3
RFC5-201ENST00000392542 FAM107AO95990 144 aa13.2□□□□□ -0.3
RFC5-201ENST00000392542 PSAPP07602 524 aa13.2□□□□□ -0.3
RFC5-201ENST00000392542 RTP1P59025 263 aa13.2□□□□□ -0.3
RFC5-201ENST00000392542 MAGOHP61326 146 aaKnown RBP13.2□□□□□ -0.3
RFC5-201ENST00000392542 CLEC16AQ2KHT3 1053 aa13.2□□□□□ -0.3
RFC5-201ENST00000392542 ENOSF1Q7L5Y1 443 aa13.2□□□□□ -0.3
RFC5-201ENST00000392542 HOOK3Q86VS8 718 aa13.2□□□□□ -0.3
RFC5-201ENST00000392542 REPS2Q8NFH8 660 aa13.2□□□□□ -0.3
RFC5-201ENST00000392542 JDP2Q8WYK2 163 aa13.2□□□□□ -0.3
RFC5-201ENST00000392542 TLCD1Q96CP7 247 aa13.2□□□□□ -0.3
RFC5-201ENST00000392542 PABPC3Q9H361 631 aaKnown RBP13.2□□□□□ -0.3
RFC5-201ENST00000392542 PDLIM7Q9NR12 457 aa13.2□□□□□ -0.3
RFC5-201ENST00000392542 CNOT8Q9UFF9 292 aaKnown RBP13.2□□□□□ -0.3
RFC5-201ENST00000392542 E7EVH7 732 aa13.2□□□□□ -0.3
RFC5-201ENST00000392542 HNRNPDLO14979 420 aaKnown RBP13.2□□□□□ -0.3
RFC5-201ENST00000392542 GRIN3BO60391 1043 aa13.2□□□□□ -0.3
RFC5-201ENST00000392542 DGAT1O75907 488 aa13.2□□□□□ -0.3
RFC5-201ENST00000392542 DLATP10515 647 aaKnown RBP13.2□□□□□ -0.3
RFC5-201ENST00000392542 COILP38432 576 aaPredicted RBP13.2□□□□□ -0.3
RFC5-201ENST00000392542 RPL21P46778 160 aaKnown RBP13.2□□□□□ -0.3
RFC5-201ENST00000392542 BACE1P56817 501 aa13.2□□□□□ -0.3
RFC5-201ENST00000392542 RWDD2BP57060 319 aa13.2□□□□□ -0.3
RFC5-201ENST00000392542 GCNT1Q02742 428 aa13.2□□□□□ -0.3
RFC5-201ENST00000392542 SIX1Q15475 284 aaPredicted RBP13.2□□□□□ -0.3
RFC5-201ENST00000392542 BRDTQ58F21 947 aaPredicted RBP13.2□□□□□ -0.3
RFC5-201ENST00000392542 MICALCLQ6ZW33 695 aa13.2□□□□□ -0.3
RFC5-201ENST00000392542 LRRC4CQ9HCJ2 640 aa13.2□□□□□ -0.3
RFC5-201ENST00000392542 XPNPEP1Q9NQW7 623 aa13.2□□□□□ -0.3
RFC5-201ENST00000392542 NFASCO94856 1347 aa13.19□□□□□ -0.3
RFC5-201ENST00000392542 TCRBV7S2A1N4TA0A589 114 aa13.19□□□□□ -0.3
RFC5-201ENST00000392542 ZC3H11AO75152 810 aaKnown RBP eCLIP13.19□□□□□ -0.3
RFC5-201ENST00000392542 PAEPP09466 180 aa13.19□□□□□ -0.3
RFC5-201ENST00000392542 KRT5P13647 590 aa13.19□□□□□ -0.3
RFC5-201ENST00000392542 FNTAP49354 379 aa13.19□□□□□ -0.3
RFC5-201ENST00000392542 TTC31Q49AM3 519 aaPredicted RBP13.19□□□□□ -0.3
RFC5-201ENST00000392542 DENND2CQ68D51 928 aa13.19□□□□□ -0.3
RFC5-201ENST00000392542 SNRNP48Q6IEG0 339 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms