RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 TOPORSQ9NS56 1045 aaPredicted RBP16.45■□□□□ 0.22
IGHV3-53-201ENST00000390627 LMCD1Q9NZU5 365 aa16.45■□□□□ 0.22
IGHV3-53-201ENST00000390627 KLK14Q9P0G3 267 aa16.45■□□□□ 0.22
IGHV3-53-201ENST00000390627 EIF3DO15371 548 aaKnown RBP eCLIP16.44■□□□□ 0.22
IGHV3-53-201ENST00000390627 LPXNO60711 386 aa16.44■□□□□ 0.22
IGHV3-53-201ENST00000390627 POU3F3P20264 500 aaPredicted RBP16.44■□□□□ 0.22
IGHV3-53-201ENST00000390627 SCNN1GP51170 649 aa16.44■□□□□ 0.22
IGHV3-53-201ENST00000390627 AFF1P51825 1210 aaKnown RBP16.44■□□□□ 0.22
IGHV3-53-201ENST00000390627 CASP5P51878 434 aa16.44■□□□□ 0.22
IGHV3-53-201ENST00000390627 BCAR1P56945 870 aa16.44■□□□□ 0.22
IGHV3-53-201ENST00000390627 SLFN12LQ6IEE8 588 aa16.44■□□□□ 0.22
IGHV3-53-201ENST00000390627 SYCP3Q8IZU3 236 aa16.44■□□□□ 0.22
IGHV3-53-201ENST00000390627 CEP120Q8N960 986 aa16.44■□□□□ 0.22
IGHV3-53-201ENST00000390627 KLHL23Q8NBE8 558 aa16.44■□□□□ 0.22
IGHV3-53-201ENST00000390627 CCDC47Q96A33 483 aaKnown RBP16.44■□□□□ 0.22
IGHV3-53-201ENST00000390627 ACAP3Q96P50 834 aa16.44■□□□□ 0.22
IGHV3-53-201ENST00000390627 TMEM175Q9BSA9 504 aa16.44■□□□□ 0.22
IGHV3-53-201ENST00000390627 GBP3Q9H0R5 595 aa16.44■□□□□ 0.22
IGHV3-53-201ENST00000390627 LMAN2LQ9H0V9 348 aa16.44■□□□□ 0.22
IGHV3-53-201ENST00000390627 NRDE2Q9H7Z3 1164 aa16.44■□□□□ 0.22
IGHV3-53-201ENST00000390627 EXOC1Q9NV70 894 aa16.44■□□□□ 0.22
IGHV3-53-201ENST00000390627 UBE4BO95155 1302 aa16.44■□□□□ 0.22
IGHV3-53-201ENST00000390627 OSTNP61366 133 aa16.43■□□□□ 0.22
IGHV3-53-201ENST00000390627 UBE3AQ05086 875 aa16.43■□□□□ 0.22
IGHV3-53-201ENST00000390627 EHHADHQ08426 723 aa16.43■□□□□ 0.22
IGHV3-53-201ENST00000390627 POSTNQ15063 836 aa16.43■□□□□ 0.22
IGHV3-53-201ENST00000390627 HPS3Q969F9 1004 aa16.43■□□□□ 0.22
IGHV3-53-201ENST00000390627 MRPL38Q96DV4 380 aaKnown RBP16.43■□□□□ 0.22
IGHV3-53-201ENST00000390627 FGFBP2Q9BYJ0 223 aa16.43■□□□□ 0.22
IGHV3-53-201ENST00000390627 SPG21Q9NZD8 308 aa16.43■□□□□ 0.22
IGHV3-53-201ENST00000390627 PLAGL2Q9UPG8 496 aa16.43■□□□□ 0.22
IGHV3-53-201ENST00000390627 A0A0B4J269 797 aa16.42■□□□□ 0.22
IGHV3-53-201ENST00000390627 OGTO15294 1046 aa16.42■□□□□ 0.22
IGHV3-53-201ENST00000390627 KLRC4O43908 158 aa16.42■□□□□ 0.22
IGHV3-53-201ENST00000390627 NR1I2O75469 434 aa16.42■□□□□ 0.22
IGHV3-53-201ENST00000390627 FGF18O76093 207 aa16.42■□□□□ 0.22
IGHV3-53-201ENST00000390627 PRPF6O94906 941 aaKnown RBP16.42■□□□□ 0.22
IGHV3-53-201ENST00000390627 ITGB1P05556 798 aa16.42■□□□□ 0.22
IGHV3-53-201ENST00000390627 THP07101 528 aa16.42■□□□□ 0.22
IGHV3-53-201ENST00000390627 GALTP07902 379 aa16.42■□□□□ 0.22
IGHV3-53-201ENST00000390627 CLTAP09496 248 aa16.42■□□□□ 0.22
IGHV3-53-201ENST00000390627 UBE2HP62256 183 aa16.42■□□□□ 0.22
IGHV3-53-201ENST00000390627 PLCB3Q01970 1234 aa16.42■□□□□ 0.22
IGHV3-53-201ENST00000390627 KRT17Q04695 432 aa16.42■□□□□ 0.22
IGHV3-53-201ENST00000390627 DSC1Q08554 894 aa16.42■□□□□ 0.22
IGHV3-53-201ENST00000390627 PSMD2Q13200 908 aa16.42■□□□□ 0.22
IGHV3-53-201ENST00000390627 SLC39A4Q6P5W5 647 aa16.42■□□□□ 0.22
IGHV3-53-201ENST00000390627 ZNF280BQ86YH2 543 aa16.42■□□□□ 0.22
IGHV3-53-201ENST00000390627 SLC39A11Q8N1S5 342 aa16.42■□□□□ 0.22
IGHV3-53-201ENST00000390627 GSTCDQ8NEC7 633 aa16.42■□□□□ 0.22
IGHV3-53-201ENST00000390627 ENGASEQ8NFI3 743 aa16.42■□□□□ 0.22
IGHV3-53-201ENST00000390627 TIGD1Q96MW7 591 aa16.42■□□□□ 0.22
IGHV3-53-201ENST00000390627 MSTO1Q9BUK6 570 aa16.42■□□□□ 0.22
IGHV3-53-201ENST00000390627 MIOSQ9NXC5 875 aa16.42■□□□□ 0.22
IGHV3-53-201ENST00000390627 PUF60Q9UHX1 559 aaKnown RBP16.42■□□□□ 0.22
IGHV3-53-201ENST00000390627 HOOK1Q9UJC3 728 aaKnown RBP16.42■□□□□ 0.22
IGHV3-53-201ENST00000390627 LZTS1Q9Y250 596 aa16.42■□□□□ 0.22
IGHV3-53-201ENST00000390627 MTCH2Q9Y6C9 303 aa16.42■□□□□ 0.22
IGHV3-53-201ENST00000390627 STYXL1Q9Y6J8 313 aa16.42■□□□□ 0.22
IGHV3-53-201ENST00000390627 CHD9Q3L8U1 2897 aa16.42■□□□□ 0.22
IGHV3-53-201ENST00000390627 CHD7Q9P2D1 2997 aa16.41■□□□□ 0.22
IGHV3-53-201ENST00000390627 ANKRD63C9JTQ0 380 aa16.41■□□□□ 0.22
IGHV3-53-201ENST00000390627 GRM6O15303 877 aa16.41■□□□□ 0.22
IGHV3-53-201ENST00000390627 KINO60870 393 aaKnown RBP16.41■□□□□ 0.22
IGHV3-53-201ENST00000390627 DDHD2O94830 711 aa16.41■□□□□ 0.22
IGHV3-53-201ENST00000390627 RPN1P04843 607 aaKnown RBP16.41■□□□□ 0.22
IGHV3-53-201ENST00000390627 ALDH2P05091 517 aa16.41■□□□□ 0.22
IGHV3-53-201ENST00000390627 PRR29P0C7W0 189 aa16.41■□□□□ 0.22
IGHV3-53-201ENST00000390627 PBX3P40426 434 aa16.41■□□□□ 0.22
IGHV3-53-201ENST00000390627 SLC11A1P49279 550 aa16.41■□□□□ 0.22
IGHV3-53-201ENST00000390627 KCNA1Q09470 495 aa16.41■□□□□ 0.22
IGHV3-53-201ENST00000390627 DPYDQ12882 1025 aa16.41■□□□□ 0.22
IGHV3-53-201ENST00000390627 SNW1Q13573 536 aaKnown RBP16.41■□□□□ 0.22
IGHV3-53-201ENST00000390627 KMT5BQ4FZB7 885 aa16.41■□□□□ 0.22
IGHV3-53-201ENST00000390627 TIGD5Q53EQ6 642 aa16.41■□□□□ 0.22
IGHV3-53-201ENST00000390627 EPM2AIP1Q7L775 607 aaPredicted RBP16.41■□□□□ 0.22
IGHV3-53-201ENST00000390627 COLGALT2Q8IYK4 626 aa16.41■□□□□ 0.22
IGHV3-53-201ENST00000390627 SPPL3Q8TCT6 385 aa16.41■□□□□ 0.22
IGHV3-53-201ENST00000390627 POF1BQ8WVV4 589 aa16.41■□□□□ 0.22
IGHV3-53-201ENST00000390627 POMGNT1Q8WZA1 660 aa16.41■□□□□ 0.22
IGHV3-53-201ENST00000390627 TMEM169Q96HH4 297 aa16.41■□□□□ 0.22
IGHV3-53-201ENST00000390627 SNX27Q96L92 541 aa16.41■□□□□ 0.22
IGHV3-53-201ENST00000390627 HAPLN2Q9GZV7 340 aa16.41■□□□□ 0.22
IGHV3-53-201ENST00000390627 ALG13Q9NP73 1137 aaKnown RBP16.41■□□□□ 0.22
IGHV3-53-201ENST00000390627 DNAJB4Q9UDY4 337 aa16.41■□□□□ 0.22
IGHV3-53-201ENST00000390627 FAN1Q9Y2M0 1017 aa16.41■□□□□ 0.22
IGHV3-53-201ENST00000390627 TDRD15B5MCY1 1934 aaKnown RBP16.41■□□□□ 0.22
IGHV3-53-201ENST00000390627 PTGESO14684 152 aa16.4■□□□□ 0.22
IGHV3-53-201ENST00000390627 GADD45BO75293 160 aaPredicted RBP16.4■□□□□ 0.22
IGHV3-53-201ENST00000390627 GARTP22102 1010 aa16.4■□□□□ 0.22
IGHV3-53-201ENST00000390627 OR1G1P47890 313 aa16.4■□□□□ 0.22
IGHV3-53-201ENST00000390627 TUSC3Q13454 348 aa16.4■□□□□ 0.22
IGHV3-53-201ENST00000390627 XKR4Q5GH76 650 aa16.4■□□□□ 0.22
IGHV3-53-201ENST00000390627 CLEC17AQ6ZS10 378 aa16.4■□□□□ 0.22
IGHV3-53-201ENST00000390627 MICALL1Q8N3F8 863 aa16.4■□□□□ 0.22
IGHV3-53-201ENST00000390627 GLIS3Q8NEA6 775 aa16.4■□□□□ 0.22
IGHV3-53-201ENST00000390627 MAFAQ8NHW3 353 aaPredicted RBP16.4■□□□□ 0.22
IGHV3-53-201ENST00000390627 ZNF507Q8TCN5 953 aa16.4■□□□□ 0.22
IGHV3-53-201ENST00000390627 GBP4Q96PP9 640 aa16.4■□□□□ 0.22
IGHV3-53-201ENST00000390627 RPF1Q9H9Y2 349 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms