RNA–Protein interactions for RNA: ENST00000390425.2

TRAV3-201, Transcript of T cell receptor alpha variable 3 (gene/pseudogene), humanhuman

APPRIS P1 BASIC

Gene TRAV3, Length 519 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3-201ENST00000390425 TGM5O43548 720 aa12.21□□□□□ -0.45
TRAV3-201ENST00000390425 NARSO43776 548 aaKnown RBP12.21□□□□□ -0.45
TRAV3-201ENST00000390425 RECQL4O94761 1208 aa12.21□□□□□ -0.45
TRAV3-201ENST00000390425 NPR3P17342 541 aa12.21□□□□□ -0.45
TRAV3-201ENST00000390425 RPA1P27694 616 aa12.21□□□□□ -0.45
TRAV3-201ENST00000390425 NBR1Q14596 966 aa12.21□□□□□ -0.45
TRAV3-201ENST00000390425 ZNF174Q15697 407 aa12.21□□□□□ -0.45
TRAV3-201ENST00000390425 USP41Q3LFD5 358 aa12.21□□□□□ -0.45
TRAV3-201ENST00000390425 LILRA6Q6PI73 481 aa12.21□□□□□ -0.45
TRAV3-201ENST00000390425 PADI6Q6TGC4 694 aa12.21□□□□□ -0.45
TRAV3-201ENST00000390425 PRSS55Q6UWB4 352 aaPredicted RBP12.21□□□□□ -0.45
TRAV3-201ENST00000390425 PALB2Q86YC2 1186 aa12.21□□□□□ -0.45
TRAV3-201ENST00000390425 GLYCTKQ8IVS8 523 aa12.21□□□□□ -0.45
TRAV3-201ENST00000390425 GPR65Q8IYL9 337 aa12.21□□□□□ -0.45
TRAV3-201ENST00000390425 RIN2Q8WYP3 895 aaPredicted RBP12.21□□□□□ -0.45
TRAV3-201ENST00000390425 C8orf76Q96K31 380 aa12.21□□□□□ -0.45
TRAV3-201ENST00000390425 NACC1Q96RE7 527 aa12.21□□□□□ -0.45
TRAV3-201ENST00000390425 KIF2CQ99661 725 aa12.21□□□□□ -0.45
TRAV3-201ENST00000390425 KIFC3Q9BVG8 833 aa12.21□□□□□ -0.45
TRAV3-201ENST00000390425 SNTG2Q9NY99 539 aa12.21□□□□□ -0.45
TRAV3-201ENST00000390425 PARP2Q9UGN5 583 aa12.21□□□□□ -0.45
TRAV3-201ENST00000390425 LIMCH1Q9UPQ0 1083 aa12.21□□□□□ -0.45
TRAV3-201ENST00000390425 COL4A3Q01955 1670 aa12.21□□□□□ -0.45
TRAV3-201ENST00000390425 CACNA1IQ9P0X4 2223 aa12.21□□□□□ -0.46
TRAV3-201ENST00000390425 KIF4AO95239 1232 aa12.2□□□□□ -0.46
TRAV3-201ENST00000390425 PRKCBP05771 671 aa12.2□□□□□ -0.46
TRAV3-201ENST00000390425 CYP11B2P19099 503 aa12.2□□□□□ -0.46
TRAV3-201ENST00000390425 IGFBP6P24592 240 aaPredicted RBP12.2□□□□□ -0.46
TRAV3-201ENST00000390425 NUBP1P53384 320 aa12.2□□□□□ -0.46
TRAV3-201ENST00000390425 ORC2Q13416 577 aaPredicted RBP12.2□□□□□ -0.46
TRAV3-201ENST00000390425 TUSC3Q13454 348 aa12.2□□□□□ -0.46
TRAV3-201ENST00000390425 TDGQ13569 410 aa12.2□□□□□ -0.46
TRAV3-201ENST00000390425 HSP90AA2PQ14568 343 aaPredicted RBP12.2□□□□□ -0.46
TRAV3-201ENST00000390425 SAFBQ15424 915 aaKnown RBP eCLIP12.2□□□□□ -0.46
TRAV3-201ENST00000390425 TTC38Q5R3I4 469 aa12.2□□□□□ -0.46
TRAV3-201ENST00000390425 ASTLQ6HA08 431 aaPredicted RBP12.2□□□□□ -0.46
TRAV3-201ENST00000390425 NOSTRINQ8IVI9 506 aa12.2□□□□□ -0.46
TRAV3-201ENST00000390425 ZBTB8OSQ8IWT0 167 aa12.2□□□□□ -0.46
TRAV3-201ENST00000390425 C4orf32Q8N8J7 132 aa12.2□□□□□ -0.46
TRAV3-201ENST00000390425 FBXO18Q8NFZ0 1043 aa12.2□□□□□ -0.46
TRAV3-201ENST00000390425 HASPINQ8TF76 798 aa12.2□□□□□ -0.46
TRAV3-201ENST00000390425 RSAD2Q8WXG1 361 aa12.2□□□□□ -0.46
TRAV3-201ENST00000390425 SMG7Q92540 1137 aaKnown RBP12.2□□□□□ -0.46
TRAV3-201ENST00000390425 FOXP1Q9H334 677 aaPredicted RBP12.2□□□□□ -0.46
TRAV3-201ENST00000390425 POLD4Q9HCU8 107 aa12.2□□□□□ -0.46
TRAV3-201ENST00000390425 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.2□□□□□ -0.46
TRAV3-201ENST00000390425 FNIP2Q9P278 1114 aa12.2□□□□□ -0.46
TRAV3-201ENST00000390425 EP300Q09472 2414 aaPredicted RBP12.2□□□□□ -0.46
TRAV3-201ENST00000390425 SF3B1O75533 1304 aaKnown RBP eCLIP12.19□□□□□ -0.46
TRAV3-201ENST00000390425 ARHGEF35A5YM69 484 aa12.19□□□□□ -0.46
TRAV3-201ENST00000390425 ACKR2O00590 384 aa12.19□□□□□ -0.46
TRAV3-201ENST00000390425 N4BP3O15049 544 aa12.19□□□□□ -0.46
TRAV3-201ENST00000390425 GFRA3O60609 400 aa12.19□□□□□ -0.46
TRAV3-201ENST00000390425 NR1I2O75469 434 aa12.19□□□□□ -0.46
TRAV3-201ENST00000390425 C1RP00736 705 aa12.19□□□□□ -0.46
TRAV3-201ENST00000390425 NAMPTP43490 491 aa12.19□□□□□ -0.46
TRAV3-201ENST00000390425 CLCN5P51795 746 aa12.19□□□□□ -0.46
TRAV3-201ENST00000390425 PRPF4BQ13523 1007 aaKnown RBP12.19□□□□□ -0.46
TRAV3-201ENST00000390425 MAPK6Q16659 721 aa12.19□□□□□ -0.46
TRAV3-201ENST00000390425 CYP26C1Q6V0L0 522 aa12.19□□□□□ -0.46
TRAV3-201ENST00000390425 HDAC7Q8WUI4 952 aa12.19□□□□□ -0.46
TRAV3-201ENST00000390425 ATOH1Q92858 354 aaPredicted RBP12.19□□□□□ -0.46
TRAV3-201ENST00000390425 LLPHQ9BRT6 129 aaKnown RBP12.19□□□□□ -0.46
TRAV3-201ENST00000390425 NT5C3AQ9H0P0 336 aa12.19□□□□□ -0.46
TRAV3-201ENST00000390425 C2orf40Q9H1Z8 148 aa12.19□□□□□ -0.46
TRAV3-201ENST00000390425 PLEKHA4Q9H4M7 779 aa12.19□□□□□ -0.46
TRAV3-201ENST00000390425 IGSF9Q9P2J2 1179 aa12.19□□□□□ -0.46
TRAV3-201ENST00000390425 EPS15L1Q9UBC2 864 aa12.19□□□□□ -0.46
TRAV3-201ENST00000390425 FBXW11Q9UKB1 542 aa12.19□□□□□ -0.46
TRAV3-201ENST00000390425 ANK1P16157 1881 aa12.19□□□□□ -0.46
TRAV3-201ENST00000390425 PATJQ8NI35 1801 aa12.18□□□□□ -0.46
TRAV3-201ENST00000390425 WDR87Q6ZQQ6 2873 aa12.18□□□□□ -0.46
TRAV3-201ENST00000390425 PROB1E7EW31 1015 aa12.18□□□□□ -0.46
TRAV3-201ENST00000390425 ADAM12O43184 909 aa12.18□□□□□ -0.46
TRAV3-201ENST00000390425 PI15O43692 258 aa12.18□□□□□ -0.46
TRAV3-201ENST00000390425 LIG1P18858 919 aa12.18□□□□□ -0.46
TRAV3-201ENST00000390425 AOC1P19801 751 aa12.18□□□□□ -0.46
TRAV3-201ENST00000390425 MUTP22033 750 aa12.18□□□□□ -0.46
TRAV3-201ENST00000390425 GBP2P32456 591 aaPredicted RBP12.18□□□□□ -0.46
TRAV3-201ENST00000390425 TOB1P50616 345 aaPredicted RBP12.18□□□□□ -0.46
TRAV3-201ENST00000390425 FXR2P51116 673 aaKnown RBP eCLIP12.18□□□□□ -0.46
TRAV3-201ENST00000390425 NT5DC1Q5TFE4 455 aa12.18□□□□□ -0.46
TRAV3-201ENST00000390425 ERICH6BQ5W0A0 696 aa12.18□□□□□ -0.46
TRAV3-201ENST00000390425 FLCNQ8NFG4 579 aa12.18□□□□□ -0.46
TRAV3-201ENST00000390425 ERMNQ8TAM6 284 aa12.18□□□□□ -0.46
TRAV3-201ENST00000390425 LNX1Q8TBB1 728 aaPredicted RBP12.18□□□□□ -0.46
TRAV3-201ENST00000390425 PIK3R5Q8WYR1 880 aa12.18□□□□□ -0.46
TRAV3-201ENST00000390425 PRKD2Q9BZL6 878 aa12.18□□□□□ -0.46
TRAV3-201ENST00000390425 BHMT2Q9H2M3 363 aa12.18□□□□□ -0.46
TRAV3-201ENST00000390425 MFSD1Q9H3U5 465 aa12.18□□□□□ -0.46
TRAV3-201ENST00000390425 ZDHHC7Q9NXF8 308 aa12.18□□□□□ -0.46
TRAV3-201ENST00000390425 DPP7Q9UHL4 492 aa12.18□□□□□ -0.46
TRAV3-201ENST00000390425 KRBA1A5PL33 1030 aa12.17□□□□□ -0.46
TRAV3-201ENST00000390425 PP2D1A8MPX8 630 aa12.17□□□□□ -0.46
TRAV3-201ENST00000390425 TADA2AO75478 443 aa12.17□□□□□ -0.46
TRAV3-201ENST00000390425 ZMYND10O75800 440 aa12.17□□□□□ -0.46
TRAV3-201ENST00000390425 THP07101 528 aa12.17□□□□□ -0.46
TRAV3-201ENST00000390425 CCT6AP40227 531 aaKnown RBP12.17□□□□□ -0.46
TRAV3-201ENST00000390425 NBL1P41271 181 aa12.17□□□□□ -0.46
TRAV3-201ENST00000390425 TRAPPC10P48553 1259 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms