RNA–Protein interactions for RNA: ENST00000389212.7

RAPGEF3-201, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 3,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-201ENST00000389212 CHADLQ6NUI6 762 aa12.56□□□□□ -0.4
RAPGEF3-201ENST00000389212 INTS8Q75QN2 995 aaKnown RBP12.56□□□□□ -0.4
RAPGEF3-201ENST00000389212 ZDHHC14Q8IZN3 488 aa12.56□□□□□ -0.4
RAPGEF3-201ENST00000389212 ATP8B4Q8TF62 1192 aa12.56□□□□□ -0.4
RAPGEF3-201ENST00000389212 PI4K2AQ9BTU6 479 aa12.56□□□□□ -0.4
RAPGEF3-201ENST00000389212 E7EVH7 732 aa12.56□□□□□ -0.4
RAPGEF3-201ENST00000389212 RASA3Q14644 834 aa12.56□□□□□ -0.4
RAPGEF3-201ENST00000389212 TNIP1Q15025 636 aa12.56□□□□□ -0.4
RAPGEF3-201ENST00000389212 KRT71Q3SY84 523 aa12.56□□□□□ -0.4
RAPGEF3-201ENST00000389212 LRRC23Q53EV4 343 aaPredicted RBP12.56□□□□□ -0.4
RAPGEF3-201ENST00000389212 TMC3Q7Z5M5 1100 aa12.56□□□□□ -0.4
RAPGEF3-201ENST00000389212 PARP9Q8IXQ6 854 aa12.56□□□□□ -0.4
RAPGEF3-201ENST00000389212 TTLL6Q8N841 843 aa12.56□□□□□ -0.4
RAPGEF3-201ENST00000389212 SLC40A1Q9NP59 571 aa12.56□□□□□ -0.4
RAPGEF3-201ENST00000389212 CNOT8Q9UFF9 292 aaKnown RBP12.56□□□□□ -0.4
RAPGEF3-201ENST00000389212 PTPN22Q9Y2R2 807 aa12.56□□□□□ -0.4
RAPGEF3-201ENST00000389212 UBE4BO95155 1302 aa12.56□□□□□ -0.4
RAPGEF3-201ENST00000389212 OATP04181 439 aa12.56□□□□□ -0.4
RAPGEF3-201ENST00000389212 SHBGP04278 402 aa12.56□□□□□ -0.4
RAPGEF3-201ENST00000389212 ASNSP08243 561 aa12.56□□□□□ -0.4
RAPGEF3-201ENST00000389212 DLATP10515 647 aaKnown RBP12.56□□□□□ -0.4
RAPGEF3-201ENST00000389212 PYGBP11216 843 aa12.56□□□□□ -0.4
RAPGEF3-201ENST00000389212 CHRNB2P17787 502 aa12.56□□□□□ -0.4
RAPGEF3-201ENST00000389212 COMTP21964 271 aa12.56□□□□□ -0.4
RAPGEF3-201ENST00000389212 ANXA13P27216 316 aa12.56□□□□□ -0.4
RAPGEF3-201ENST00000389212 ADSSP30520 456 aa12.56□□□□□ -0.4
RAPGEF3-201ENST00000389212 SSTR3P32745 418 aaPredicted RBP12.56□□□□□ -0.4
RAPGEF3-201ENST00000389212 KCNJ1P48048 391 aa12.56□□□□□ -0.4
RAPGEF3-201ENST00000389212 POU5F1Q01860 360 aaKnown RBP12.56□□□□□ -0.4
RAPGEF3-201ENST00000389212 TBC1D25Q3MII6 688 aa12.56□□□□□ -0.4
RAPGEF3-201ENST00000389212 PRAMEF18Q5VWM3 479 aa12.56□□□□□ -0.4
RAPGEF3-201ENST00000389212 LRRC45Q96CN5 670 aa12.56□□□□□ -0.4
RAPGEF3-201ENST00000389212 KCND2Q9NZV8 630 aa12.56□□□□□ -0.4
RAPGEF3-201ENST00000389212 MEFVO15553 781 aaPredicted RBP12.55□□□□□ -0.4
RAPGEF3-201ENST00000389212 PPFIA2O75334 1257 aa12.55□□□□□ -0.4
RAPGEF3-201ENST00000389212 SLC9A9Q8IVB4 645 aa12.55□□□□□ -0.4
RAPGEF3-201ENST00000389212 CD302Q8IX05 232 aa12.55□□□□□ -0.4
RAPGEF3-201ENST00000389212 NSMCE1Q8WV22 266 aa12.55□□□□□ -0.4
RAPGEF3-201ENST00000389212 BSNDQ8WZ55 320 aa12.55□□□□□ -0.4
RAPGEF3-201ENST00000389212 EZH1Q92800 747 aaPredicted RBP12.55□□□□□ -0.4
RAPGEF3-201ENST00000389212 RMDN3Q96TC7 470 aa12.55□□□□□ -0.4
RAPGEF3-201ENST00000389212 SLITRK6Q9H5Y7 841 aa12.55□□□□□ -0.4
RAPGEF3-201ENST00000389212 TLDC2A0PJX2 215 aa12.55□□□□□ -0.4
RAPGEF3-201ENST00000389212 NEFHP12036 1026 aa12.55□□□□□ -0.4
RAPGEF3-201ENST00000389212 DPEP1P16444 411 aa12.55□□□□□ -0.4
RAPGEF3-201ENST00000389212 PAX3P23760 479 aa12.55□□□□□ -0.4
RAPGEF3-201ENST00000389212 MDH1P40925 334 aaKnown RBP12.55□□□□□ -0.4
RAPGEF3-201ENST00000389212 IFFO1Q0D2I5 559 aa12.55□□□□□ -0.4
RAPGEF3-201ENST00000389212 CETN1Q12798 172 aa12.55□□□□□ -0.4
RAPGEF3-201ENST00000389212 MTA1Q13330 715 aa12.55□□□□□ -0.4
RAPGEF3-201ENST00000389212 MTMR2Q13614 643 aa12.55□□□□□ -0.4
RAPGEF3-201ENST00000389212 ACCSLQ4AC99 568 aa12.55□□□□□ -0.4
RAPGEF3-201ENST00000389212 LLGL2Q6P1M3 1020 aa12.55□□□□□ -0.4
RAPGEF3-201ENST00000389212 EPS8L1Q8TE68 723 aa12.55□□□□□ -0.4
RAPGEF3-201ENST00000389212 FMO2Q99518 471 aa12.55□□□□□ -0.4
RAPGEF3-201ENST00000389212 TMEM206Q9H813 350 aa12.55□□□□□ -0.4
RAPGEF3-201ENST00000389212 RIPK3Q9Y572 518 aa12.55□□□□□ -0.4
RAPGEF3-201ENST00000389212 UBIAD1Q9Y5Z9 338 aa12.55□□□□□ -0.4
RAPGEF3-201ENST00000389212 MAGOHP61326 146 aaKnown RBP12.54□□□□□ -0.4
RAPGEF3-201ENST00000389212 CXCL9Q07325 125 aa12.54□□□□□ -0.4
RAPGEF3-201ENST00000389212 PTGISQ16647 500 aa12.54□□□□□ -0.4
RAPGEF3-201ENST00000389212 DAB2IPQ5VWQ8 1189 aa12.54□□□□□ -0.4
RAPGEF3-201ENST00000389212 TRIM68Q6AZZ1 485 aa12.54□□□□□ -0.4
RAPGEF3-201ENST00000389212 MDM1Q8TC05 714 aa12.54□□□□□ -0.4
RAPGEF3-201ENST00000389212 FBXO25Q8TCJ0 367 aa12.54□□□□□ -0.4
RAPGEF3-201ENST00000389212 TAS1R2Q8TE23 839 aa12.54□□□□□ -0.4
RAPGEF3-201ENST00000389212 MAGOHBQ96A72 148 aaKnown RBP12.54□□□□□ -0.4
RAPGEF3-201ENST00000389212 TSC22D3Q99576 134 aa12.54□□□□□ -0.4
RAPGEF3-201ENST00000389212 HAUS2Q9NVX0 235 aa12.54□□□□□ -0.4
RAPGEF3-201ENST00000389212 LMCD1Q9NZU5 365 aa12.54□□□□□ -0.4
RAPGEF3-201ENST00000389212 DAAM1Q9Y4D1 1078 aa12.54□□□□□ -0.4
RAPGEF3-201ENST00000389212 CTDP1Q9Y5B0 961 aaPredicted RBP12.54□□□□□ -0.4
RAPGEF3-201ENST00000389212 HMGB1P1B2RPK0 211 aaPredicted RBP12.54□□□□□ -0.4
RAPGEF3-201ENST00000389212 VCAM1P19320 739 aa12.54□□□□□ -0.4
RAPGEF3-201ENST00000389212 PTENP60484 403 aa12.54□□□□□ -0.4
RAPGEF3-201ENST00000389212 PGM5Q15124 567 aa12.54□□□□□ -0.4
RAPGEF3-201ENST00000389212 SNRNP35Q16560 246 aaKnown RBP12.54□□□□□ -0.4
RAPGEF3-201ENST00000389212 TTC27Q6P3X3 843 aa12.54□□□□□ -0.4
RAPGEF3-201ENST00000389212 JAMLQ86YT9 394 aa12.54□□□□□ -0.4
RAPGEF3-201ENST00000389212 SYNPO2Q9UMS6 1093 aa12.54□□□□□ -0.4
RAPGEF3-201ENST00000389212 DENND3A2RUS2 1198 aa12.54□□□□□ -0.4
RAPGEF3-201ENST00000389212 PYGMP11217 842 aa12.54□□□□□ -0.4
RAPGEF3-201ENST00000389212 GPC5P78333 572 aa12.54□□□□□ -0.4
RAPGEF3-201ENST00000389212 KCTD17Q8N5Z5 321 aa12.54□□□□□ -0.4
RAPGEF3-201ENST00000389212 ZNF473Q8WTR7 871 aaKnown RBP12.54□□□□□ -0.4
RAPGEF3-201ENST00000389212 CCT8L2Q96SF2 557 aa12.54□□□□□ -0.4
RAPGEF3-201ENST00000389212 TRIM7Q9C029 511 aa12.54□□□□□ -0.4
RAPGEF3-201ENST00000389212 CARD9Q9H257 536 aa12.54□□□□□ -0.4
RAPGEF3-201ENST00000389212 RPTORQ8N122 1335 aa12.53□□□□□ -0.4
RAPGEF3-201ENST00000389212 GOLGA6L10A0A0M3HER8 536 aa12.53□□□□□ -0.4
RAPGEF3-201ENST00000389212 SPOPO43791 374 aa12.53□□□□□ -0.4
RAPGEF3-201ENST00000389212 NPTX2P47972 431 aa12.53□□□□□ -0.4
RAPGEF3-201ENST00000389212 RAB27AP51159 221 aa12.53□□□□□ -0.4
RAPGEF3-201ENST00000389212 ARHGEF16Q5VV41 709 aa12.53□□□□□ -0.4
RAPGEF3-201ENST00000389212 CCDC13Q8IYE1 715 aa12.53□□□□□ -0.4
RAPGEF3-201ENST00000389212 PRELID2Q8N945 189 aa12.53□□□□□ -0.4
RAPGEF3-201ENST00000389212 ZNF653Q96CK0 615 aa12.53□□□□□ -0.4
RAPGEF3-201ENST00000389212 ATG4CQ96DT6 458 aa12.53□□□□□ -0.4
RAPGEF3-201ENST00000389212 NUP85Q9BW27 656 aa12.53□□□□□ -0.4
RAPGEF3-201ENST00000389212 EPN3Q9H201 632 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms