RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 EBAG9O00559 213 aa16.07■□□□□ 0.16
SCFD2-201ENST00000388940 PTPRAP18433 802 aa16.07■□□□□ 0.16
SCFD2-201ENST00000388940 GBP1P32455 592 aa16.07■□□□□ 0.16
SCFD2-201ENST00000388940 ATP1A2P50993 1020 aa16.07■□□□□ 0.16
SCFD2-201ENST00000388940 PDE6CP51160 858 aa16.07■□□□□ 0.16
SCFD2-201ENST00000388940 SNRNP48Q6IEG0 339 aaKnown RBP16.07■□□□□ 0.16
SCFD2-201ENST00000388940 TAS1R2Q8TE23 839 aa16.07■□□□□ 0.16
SCFD2-201ENST00000388940 POMGNT1Q8WZA1 660 aa16.07■□□□□ 0.16
SCFD2-201ENST00000388940 DPH5Q9H2P9 285 aa16.07■□□□□ 0.16
SCFD2-201ENST00000388940 ZDHHC18Q9NUE0 388 aa16.07■□□□□ 0.16
SCFD2-201ENST00000388940 ZNF214Q9UL59 606 aaPredicted RBP16.07■□□□□ 0.16
SCFD2-201ENST00000388940 TRPC6Q9Y210 931 aa16.07■□□□□ 0.16
SCFD2-201ENST00000388940 MYH9P35579 1960 aaKnown RBP16.07■□□□□ 0.16
SCFD2-201ENST00000388940 DOCK5Q9H7D0 1870 aa16.07■□□□□ 0.16
SCFD2-201ENST00000388940 C19orf81C9J6K1 198 aa16.07■□□□□ 0.16
SCFD2-201ENST00000388940 ERLIN2O94905 339 aa16.07■□□□□ 0.16
SCFD2-201ENST00000388940 PTGIRP43119 386 aa16.07■□□□□ 0.16
SCFD2-201ENST00000388940 GCNT1Q02742 428 aa16.07■□□□□ 0.16
SCFD2-201ENST00000388940 DHX9Q08211 1270 aaKnown RBP16.07■□□□□ 0.16
SCFD2-201ENST00000388940 MESDQ14696 234 aa16.07■□□□□ 0.16
SCFD2-201ENST00000388940 SEL1L2Q5TEA6 688 aa16.07■□□□□ 0.16
SCFD2-201ENST00000388940 ACAD10Q6JQN1 1059 aa16.07■□□□□ 0.16
SCFD2-201ENST00000388940 SV2AQ7L0J3 742 aa16.07■□□□□ 0.16
SCFD2-201ENST00000388940 TRMT1LQ7Z2T5 733 aaKnown RBP16.07■□□□□ 0.16
SCFD2-201ENST00000388940 JAMLQ86YT9 394 aa16.07■□□□□ 0.16
SCFD2-201ENST00000388940 MICALL2Q8IY33 904 aa16.07■□□□□ 0.16
SCFD2-201ENST00000388940 ZNF564Q8TBZ8 553 aaPredicted RBP16.07■□□□□ 0.16
SCFD2-201ENST00000388940 UBLCP1Q8WVY7 318 aaPredicted RBP16.07■□□□□ 0.16
SCFD2-201ENST00000388940 FMO2Q99518 471 aa16.07■□□□□ 0.16
SCFD2-201ENST00000388940 POP1Q99575 1024 aaKnown RBP16.07■□□□□ 0.16
SCFD2-201ENST00000388940 NUP85Q9BW27 656 aa16.07■□□□□ 0.16
SCFD2-201ENST00000388940 XPNPEP1Q9NQW7 623 aa16.07■□□□□ 0.16
SCFD2-201ENST00000388940 PCDHA3Q9Y5H8 950 aa16.07■□□□□ 0.16
SCFD2-201ENST00000388940 ADGRA3Q8IWK6 1321 aa16.06■□□□□ 0.16
SCFD2-201ENST00000388940 MYO1FO00160 1098 aa16.06■□□□□ 0.16
SCFD2-201ENST00000388940 PODXLO00592 558 aa16.06■□□□□ 0.16
SCFD2-201ENST00000388940 KIAA0391O15091 583 aaKnown RBP16.06■□□□□ 0.16
SCFD2-201ENST00000388940 GRIN3BO60391 1043 aa16.06■□□□□ 0.16
SCFD2-201ENST00000388940 LSP1P33241 339 aa16.06■□□□□ 0.16
SCFD2-201ENST00000388940 MDH1P40925 334 aaKnown RBP16.06■□□□□ 0.16
SCFD2-201ENST00000388940 CCT5P48643 541 aa16.06■□□□□ 0.16
SCFD2-201ENST00000388940 EIF3BP55884 814 aaKnown RBP16.06■□□□□ 0.16
SCFD2-201ENST00000388940 CLDN10P78369 228 aa16.06■□□□□ 0.16
SCFD2-201ENST00000388940 CYP1B1Q16678 543 aa16.06■□□□□ 0.16
SCFD2-201ENST00000388940 TBC1D10BQ4KMP7 808 aaPredicted RBP16.06■□□□□ 0.16
SCFD2-201ENST00000388940 SWSAP1Q6NVH7 229 aa16.06■□□□□ 0.16
SCFD2-201ENST00000388940 ABHD15Q6UXT9 468 aa16.06■□□□□ 0.16
SCFD2-201ENST00000388940 C15orf39Q6ZRI6 1047 aa16.06■□□□□ 0.16
SCFD2-201ENST00000388940 PRELID2Q8N945 189 aa16.06■□□□□ 0.16
SCFD2-201ENST00000388940 RUNDC3BQ96NL0 473 aa16.06■□□□□ 0.16
SCFD2-201ENST00000388940 ATP6V0A4Q9HBG4 840 aa16.06■□□□□ 0.16
SCFD2-201ENST00000388940 KIAA1586Q9HCI6 787 aa16.06■□□□□ 0.16
SCFD2-201ENST00000388940 JPH1Q9HDC5 661 aaPredicted RBP16.06■□□□□ 0.16
SCFD2-201ENST00000388940 ARHGAP28Q9P2N2 729 aa16.06■□□□□ 0.16
SCFD2-201ENST00000388940 SLC9A2Q9UBY0 812 aa16.06■□□□□ 0.16
SCFD2-201ENST00000388940 NFKBIEO00221 500 aa16.06■□□□□ 0.16
SCFD2-201ENST00000388940 SCP2P22307 547 aa16.06■□□□□ 0.16
SCFD2-201ENST00000388940 TTC19Q6DKK2 380 aaPredicted RBP16.06■□□□□ 0.16
SCFD2-201ENST00000388940 SAMD7Q7Z3H4 446 aa16.06■□□□□ 0.16
SCFD2-201ENST00000388940 IFT74Q96LB3 600 aa16.06■□□□□ 0.16
SCFD2-201ENST00000388940 EPN3Q9H201 632 aa16.06■□□□□ 0.16
SCFD2-201ENST00000388940 CYP26B1Q9NR63 512 aa16.06■□□□□ 0.16
SCFD2-201ENST00000388940 GEMIN8Q9NWZ8 242 aaKnown RBP16.06■□□□□ 0.16
SCFD2-201ENST00000388940 TMEM110-MUSTN1A8MSY1 372 aa16.05■□□□□ 0.16
SCFD2-201ENST00000388940 SPATA31C2B4DYI2 1134 aa16.05■□□□□ 0.16
SCFD2-201ENST00000388940 MARCKSL1P49006 195 aa16.05■□□□□ 0.16
SCFD2-201ENST00000388940 GMPSP49915 693 aaPredicted RBP16.05■□□□□ 0.16
SCFD2-201ENST00000388940 TAS1R3Q7RTX0 852 aa16.05■□□□□ 0.16
SCFD2-201ENST00000388940 ADAT2Q7Z6V5 191 aaKnown RBP16.05■□□□□ 0.16
SCFD2-201ENST00000388940 OR2W6PQ8NHA6 318 aa16.05■□□□□ 0.16
SCFD2-201ENST00000388940 GLG1Q92896 1179 aa16.05■□□□□ 0.16
SCFD2-201ENST00000388940 ZNF653Q96CK0 615 aa16.05■□□□□ 0.16
SCFD2-201ENST00000388940 RASSF4Q9H2L5 321 aa16.05■□□□□ 0.16
SCFD2-201ENST00000388940 ACP6Q9NPH0 428 aa16.05■□□□□ 0.16
SCFD2-201ENST00000388940 PICK1Q9NRD5 415 aa16.05■□□□□ 0.16
SCFD2-201ENST00000388940 TOPORSQ9NS56 1045 aaPredicted RBP16.05■□□□□ 0.16
SCFD2-201ENST00000388940 CYP39A1Q9NYL5 469 aa16.05■□□□□ 0.16
SCFD2-201ENST00000388940 CNOT7Q9UIV1 285 aaKnown RBP16.05■□□□□ 0.16
SCFD2-201ENST00000388940 LOC285556D6RIA3 1793 aa16.05■□□□□ 0.16
SCFD2-201ENST00000388940 TULP1O00294 542 aaPredicted RBP16.04■□□□□ 0.16
SCFD2-201ENST00000388940 HNRNPDLO14979 420 aaKnown RBP16.04■□□□□ 0.16
SCFD2-201ENST00000388940 PYGMP11217 842 aa16.04■□□□□ 0.16
SCFD2-201ENST00000388940 SOX10P56693 466 aa16.04■□□□□ 0.16
SCFD2-201ENST00000388940 ACTR2P61160 394 aa16.04■□□□□ 0.16
SCFD2-201ENST00000388940 PTGISQ16647 500 aa16.04■□□□□ 0.16
SCFD2-201ENST00000388940 CLEC16AQ2KHT3 1053 aa16.04■□□□□ 0.16
SCFD2-201ENST00000388940 XKR3Q5GH77 459 aa16.04■□□□□ 0.16
SCFD2-201ENST00000388940 AADACL2Q6P093 401 aa16.04■□□□□ 0.16
SCFD2-201ENST00000388940 CCDC60Q8IWA6 550 aaPredicted RBP16.04■□□□□ 0.16
SCFD2-201ENST00000388940 TATDN2Q93075 761 aa16.04■□□□□ 0.16
SCFD2-201ENST00000388940 PAGR1Q9BTK6 254 aa16.04■□□□□ 0.16
SCFD2-201ENST00000388940 STYXL1Q9Y6J8 313 aa16.04■□□□□ 0.16
SCFD2-201ENST00000388940 SIP14410 1827 aa16.04■□□□□ 0.16
SCFD2-201ENST00000388940 TRIM66O15016 1216 aa16.04■□□□□ 0.16
SCFD2-201ENST00000388940 EXTL3O43909 919 aa16.04■□□□□ 0.16
SCFD2-201ENST00000388940 NUDT17P0C025 328 aa16.04■□□□□ 0.16
SCFD2-201ENST00000388940 COPB2P35606 906 aa16.04■□□□□ 0.16
SCFD2-201ENST00000388940 MAGEA9P43362 315 aa16.04■□□□□ 0.16
SCFD2-201ENST00000388940 BAG6P46379 1132 aa16.04■□□□□ 0.16
SCFD2-201ENST00000388940 GUCY1A3Q02108 690 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms