RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 ATP9AO75110 1047 aa9.61□□□□□ -0.87
GPNMB-202ENST00000381990 AFPP02771 609 aaKnown RBP9.61□□□□□ -0.87
GPNMB-202ENST00000381990 CHN1P15882 459 aa9.61□□□□□ -0.87
GPNMB-202ENST00000381990 SATB1Q01826 763 aa9.61□□□□□ -0.87
GPNMB-202ENST00000381990 ADCY2Q08462 1091 aa9.61□□□□□ -0.87
GPNMB-202ENST00000381990 ZNF268Q14587 947 aaPredicted RBP9.61□□□□□ -0.87
GPNMB-202ENST00000381990 PLS1Q14651 629 aa9.61□□□□□ -0.87
GPNMB-202ENST00000381990 E2F5Q15329 346 aa9.61□□□□□ -0.87
GPNMB-202ENST00000381990 EXOC3L4Q17RC7 722 aa9.61□□□□□ -0.87
GPNMB-202ENST00000381990 PADI6Q6TGC4 694 aa9.61□□□□□ -0.87
GPNMB-202ENST00000381990 TRPM8Q7Z2W7 1104 aa9.61□□□□□ -0.87
GPNMB-202ENST00000381990 CHST13Q8NET6 341 aa9.61□□□□□ -0.87
GPNMB-202ENST00000381990 FAXDC2Q96IV6 333 aa9.61□□□□□ -0.87
GPNMB-202ENST00000381990 L3MBTL3Q96JM7 780 aaPredicted RBP9.61□□□□□ -0.87
GPNMB-202ENST00000381990 ERP44Q9BS26 406 aa9.61□□□□□ -0.87
GPNMB-202ENST00000381990 TMEM109Q9BVC6 243 aa9.61□□□□□ -0.87
GPNMB-202ENST00000381990 BCAS3Q9H6U6 928 aa9.61□□□□□ -0.87
GPNMB-202ENST00000381990 ARMCX3Q9UH62 379 aaPredicted RBP9.61□□□□□ -0.87
GPNMB-202ENST00000381990 RASAL2Q9UJF2 1139 aa9.61□□□□□ -0.87
GPNMB-202ENST00000381990 ASTN1O14525 1302 aa9.6□□□□□ -0.87
GPNMB-202ENST00000381990 CCDC189A1A4V9 331 aa9.6□□□□□ -0.87
GPNMB-202ENST00000381990 GTPBP10A4D1E9 387 aaKnown RBP9.6□□□□□ -0.87
GPNMB-202ENST00000381990 CAND2O75155 1236 aa9.6□□□□□ -0.87
GPNMB-202ENST00000381990 RTN2O75298 545 aa9.6□□□□□ -0.87
GPNMB-202ENST00000381990 STAM2O75886 525 aa9.6□□□□□ -0.87
GPNMB-202ENST00000381990 DR1Q01658 176 aa9.6□□□□□ -0.87
GPNMB-202ENST00000381990 ZKSCAN8Q15776 578 aaPredicted RBP9.6□□□□□ -0.87
GPNMB-202ENST00000381990 DUPD1Q68J44 220 aa9.6□□□□□ -0.87
GPNMB-202ENST00000381990 USP50Q70EL3 339 aaPredicted RBP9.6□□□□□ -0.87
GPNMB-202ENST00000381990 FAM178BQ8IXR5 827 aa9.6□□□□□ -0.87
GPNMB-202ENST00000381990 C4orf19Q8IY42 314 aa9.6□□□□□ -0.87
GPNMB-202ENST00000381990 ATP8B4Q8TF62 1192 aa9.6□□□□□ -0.87
GPNMB-202ENST00000381990 ZC3H15Q8WU90 426 aaKnown RBP9.6□□□□□ -0.87
GPNMB-202ENST00000381990 FIZ1Q96SL8 496 aa9.6□□□□□ -0.87
GPNMB-202ENST00000381990 PLCD4Q9BRC7 762 aa9.6□□□□□ -0.87
GPNMB-202ENST00000381990 PARP2Q9UGN5 583 aa9.6□□□□□ -0.87
GPNMB-202ENST00000381990 BAIAP2L1Q9UHR4 511 aa9.6□□□□□ -0.87
GPNMB-202ENST00000381990 KIAA1217Q5T5P2 1943 aa9.6□□□□□ -0.87
GPNMB-202ENST00000381990 RGS16O15492 202 aaPredicted RBP9.6□□□□□ -0.87
GPNMB-202ENST00000381990 CCNE2O96020 404 aa9.6□□□□□ -0.87
GPNMB-202ENST00000381990 NR3C1P04150 777 aa9.6□□□□□ -0.87
GPNMB-202ENST00000381990 XRCC5P13010 732 aaKnown RBP9.6□□□□□ -0.87
GPNMB-202ENST00000381990 ITGA4P13612 1032 aa9.6□□□□□ -0.87
GPNMB-202ENST00000381990 ALADP13716 330 aa9.6□□□□□ -0.87
GPNMB-202ENST00000381990 HSPA6P17066 643 aa9.6□□□□□ -0.87
GPNMB-202ENST00000381990 NMT1P30419 496 aaKnown RBP9.6□□□□□ -0.87
GPNMB-202ENST00000381990 PDE6CP51160 858 aa9.6□□□□□ -0.87
GPNMB-202ENST00000381990 PMS2P54278 862 aa9.6□□□□□ -0.87
GPNMB-202ENST00000381990 PSMC5P62195 406 aa9.6□□□□□ -0.87
GPNMB-202ENST00000381990 PPATQ06203 517 aa9.6□□□□□ -0.87
GPNMB-202ENST00000381990 MAPK7Q13164 816 aa9.6□□□□□ -0.87
GPNMB-202ENST00000381990 ENOX2Q16206 610 aaKnown RBP9.6□□□□□ -0.87
GPNMB-202ENST00000381990 NFIL3Q16649 462 aa9.6□□□□□ -0.87
GPNMB-202ENST00000381990 ODR4Q5SWX8 454 aa9.6□□□□□ -0.87
GPNMB-202ENST00000381990 TREML2Q5T2D2 321 aa9.6□□□□□ -0.87
GPNMB-202ENST00000381990 ZNF746Q6NUN9 644 aaPredicted RBP9.6□□□□□ -0.87
GPNMB-202ENST00000381990 DPY19L2P1Q6NXN4 242 aa9.6□□□□□ -0.87
GPNMB-202ENST00000381990 LBX2Q6XYB7 198 aa9.6□□□□□ -0.87
GPNMB-202ENST00000381990 TAOK1Q7L7X3 1001 aa9.6□□□□□ -0.87
GPNMB-202ENST00000381990 ZNF720Q7Z2F6 126 aa9.6□□□□□ -0.87
GPNMB-202ENST00000381990 CDHR1Q96JP9 859 aa9.6□□□□□ -0.87
GPNMB-202ENST00000381990 SENP7Q9BQF6 1050 aa9.6□□□□□ -0.87
GPNMB-202ENST00000381990 METTL14Q9HCE5 456 aaKnown RBP9.6□□□□□ -0.87
GPNMB-202ENST00000381990 ZDHHC18Q9NUE0 388 aa9.6□□□□□ -0.87
GPNMB-202ENST00000381990 INTS9Q9NV88 658 aaKnown RBP9.6□□□□□ -0.87
GPNMB-202ENST00000381990 DAAM1Q9Y4D1 1078 aa9.6□□□□□ -0.87
GPNMB-202ENST00000381990 NCANO14594 1321 aa9.59□□□□□ -0.87
GPNMB-202ENST00000381990 A0A0G2JMZ2 1700 aa9.59□□□□□ -0.87
GPNMB-202ENST00000381990 SLC16A3O15427 465 aaKnown RBP9.59□□□□□ -0.87
GPNMB-202ENST00000381990 HIP1RO75146 1068 aa9.59□□□□□ -0.87
GPNMB-202ENST00000381990 ATP2C2O75185 946 aa9.59□□□□□ -0.87
GPNMB-202ENST00000381990 FGGP02679 453 aa9.59□□□□□ -0.87
GPNMB-202ENST00000381990 FERP16591 822 aa9.59□□□□□ -0.87
GPNMB-202ENST00000381990 PON1P27169 355 aa9.59□□□□□ -0.87
GPNMB-202ENST00000381990 RARRES1P49788 294 aa9.59□□□□□ -0.87
GPNMB-202ENST00000381990 JAM2P57087 298 aa9.59□□□□□ -0.87
GPNMB-202ENST00000381990 IRX1P78414 480 aaPredicted RBP9.59□□□□□ -0.87
GPNMB-202ENST00000381990 ERO1BQ86YB8 467 aa9.59□□□□□ -0.87
GPNMB-202ENST00000381990 ANKRD13AQ8IZ07 590 aa9.59□□□□□ -0.87
GPNMB-202ENST00000381990 DAW1Q8N136 415 aa9.59□□□□□ -0.87
GPNMB-202ENST00000381990 PROCA1Q8NCQ7 364 aaPredicted RBP9.59□□□□□ -0.87
GPNMB-202ENST00000381990 GOLPH3Q9H4A6 298 aa9.59□□□□□ -0.87
GPNMB-202ENST00000381990 NOP53Q9NZM5 478 aaKnown RBP9.59□□□□□ -0.87
GPNMB-202ENST00000381990 TRPC6Q9Y210 931 aa9.59□□□□□ -0.87
GPNMB-202ENST00000381990 C15orf41Q9Y2V0 281 aa9.59□□□□□ -0.87
GPNMB-202ENST00000381990 PCDHB13Q9Y5F0 798 aa9.59□□□□□ -0.87
GPNMB-202ENST00000381990 ZMYM2Q9UBW7 1377 aa9.59□□□□□ -0.87
GPNMB-202ENST00000381990 A0A0G2JLL6 359 aaPredicted RBP9.59□□□□□ -0.87
GPNMB-202ENST00000381990 CXCL11O14625 94 aa9.59□□□□□ -0.87
GPNMB-202ENST00000381990 TGFB1I1O43294 461 aa9.59□□□□□ -0.87
GPNMB-202ENST00000381990 YWHABP31946 246 aaKnown RBP9.59□□□□□ -0.87
GPNMB-202ENST00000381990 LMNB2Q03252 620 aa9.59□□□□□ -0.87
GPNMB-202ENST00000381990 KCNA1Q09470 495 aa9.59□□□□□ -0.87
GPNMB-202ENST00000381990 ZC2HC1CQ53FD0 456 aaPredicted RBP9.59□□□□□ -0.87
GPNMB-202ENST00000381990 GADL1Q6ZQY3 521 aa9.59□□□□□ -0.87
GPNMB-202ENST00000381990 HS2ST1Q7LGA3 356 aa9.59□□□□□ -0.87
GPNMB-202ENST00000381990 PRRT2Q7Z6L0 340 aaPredicted RBP9.59□□□□□ -0.87
GPNMB-202ENST00000381990 RIOX2Q8IUF8 465 aa9.59□□□□□ -0.87
GPNMB-202ENST00000381990 MDM1Q8TC05 714 aa9.59□□□□□ -0.87
GPNMB-202ENST00000381990 RFFLQ8WZ73 363 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms