RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 TROVE2P10155 538 aaKnown RBP eCLIP20.23■□□□□ 0.83
SMARCD1-201ENST00000381513 XRCC5P13010 732 aaKnown RBP20.23■□□□□ 0.83
SMARCD1-201ENST00000381513 RPL13P26373 211 aaKnown RBP20.23■□□□□ 0.83
SMARCD1-201ENST00000381513 SLC45A4Q5BKX6 768 aa20.23■□□□□ 0.83
SMARCD1-201ENST00000381513 CAPN12Q6ZSI9 719 aa20.23■□□□□ 0.83
SMARCD1-201ENST00000381513 RAD54LQ92698 747 aa20.23■□□□□ 0.83
SMARCD1-201ENST00000381513 SIKE1Q9BRV8 207 aa20.23■□□□□ 0.83
SMARCD1-201ENST00000381513 AJAP1Q9UKB5 411 aaPredicted RBP20.23■□□□□ 0.83
SMARCD1-201ENST00000381513 RGPD2P0DJD1 1756 aa20.22■□□□□ 0.83
SMARCD1-201ENST00000381513 HARSP12081 509 aaKnown RBP20.22■□□□□ 0.83
SMARCD1-201ENST00000381513 HSPA6P17066 643 aa20.22■□□□□ 0.83
SMARCD1-201ENST00000381513 RXRBP28702 533 aa20.22■□□□□ 0.83
SMARCD1-201ENST00000381513 ALDH1B1P30837 517 aa20.22■□□□□ 0.83
SMARCD1-201ENST00000381513 COG7P83436 770 aa20.22■□□□□ 0.83
SMARCD1-201ENST00000381513 CLUL1Q15846 466 aa20.22■□□□□ 0.83
SMARCD1-201ENST00000381513 RASSF3Q86WH2 238 aa20.22■□□□□ 0.83
SMARCD1-201ENST00000381513 ZDHHC14Q8IZN3 488 aa20.22■□□□□ 0.83
SMARCD1-201ENST00000381513 LNX1Q8TBB1 728 aaPredicted RBP20.22■□□□□ 0.83
SMARCD1-201ENST00000381513 C1orf54Q8WWF1 131 aa20.22■□□□□ 0.83
SMARCD1-201ENST00000381513 ISCA1Q9BUE6 129 aa20.22■□□□□ 0.83
SMARCD1-201ENST00000381513 IL1RAPL1Q9NZN1 696 aa20.22■□□□□ 0.83
SMARCD1-201ENST00000381513 GCNT4Q9P109 453 aa20.22■□□□□ 0.83
SMARCD1-201ENST00000381513 HEY2Q9UBP5 337 aa20.22■□□□□ 0.83
SMARCD1-201ENST00000381513 LAMB4A4D0S4 1761 aa20.22■□□□□ 0.83
SMARCD1-201ENST00000381513 LMNB2Q03252 620 aa20.22■□□□□ 0.83
SMARCD1-201ENST00000381513 CALCRLQ16602 461 aa20.22■□□□□ 0.83
SMARCD1-201ENST00000381513 C6orf163Q5TEZ5 329 aa20.22■□□□□ 0.83
SMARCD1-201ENST00000381513 PHLDB2Q86SQ0 1253 aa20.22■□□□□ 0.83
SMARCD1-201ENST00000381513 ZNF554Q86TJ5 538 aa20.22■□□□□ 0.83
SMARCD1-201ENST00000381513 VGLL2Q8N8G2 317 aa20.22■□□□□ 0.83
SMARCD1-201ENST00000381513 TBCKQ8TEA7 893 aa20.22■□□□□ 0.83
SMARCD1-201ENST00000381513 UBA5Q9GZZ9 404 aa20.22■□□□□ 0.83
SMARCD1-201ENST00000381513 CIDEBQ9UHD4 219 aa20.22■□□□□ 0.83
SMARCD1-201ENST00000381513 SH3GLB1Q9Y371 365 aa20.22■□□□□ 0.83
SMARCD1-201ENST00000381513 KRT17Q04695 432 aa20.21■□□□□ 0.83
SMARCD1-201ENST00000381513 PABPC4Q13310 644 aaKnown RBP eCLIP20.21■□□□□ 0.835e-7■■□□□ 12.9
SMARCD1-201ENST00000381513 CHRNA2Q15822 529 aa20.21■□□□□ 0.83
SMARCD1-201ENST00000381513 CYFIP1Q7L576 1253 aa20.21■□□□□ 0.83
SMARCD1-201ENST00000381513 SCUBE1Q8IWY4 988 aa20.21■□□□□ 0.83
SMARCD1-201ENST00000381513 ZBTB38Q8NAP3 1195 aaPredicted RBP20.21■□□□□ 0.83
SMARCD1-201ENST00000381513 NSL1Q96IY1 281 aa20.21■□□□□ 0.83
SMARCD1-201ENST00000381513 TLE6Q9H808 572 aa20.21■□□□□ 0.83
SMARCD1-201ENST00000381513 SAR1AQ9NR31 198 aa20.21■□□□□ 0.83
SMARCD1-201ENST00000381513 AAASQ9NRG9 546 aa20.21■□□□□ 0.83
SMARCD1-201ENST00000381513 HNRNPCL1O60812 293 aaKnown RBP20.21■□□□□ 0.83
SMARCD1-201ENST00000381513 TNFAIP3P21580 790 aa20.21■□□□□ 0.83
SMARCD1-201ENST00000381513 EAPPQ56P03 285 aaPredicted RBP20.21■□□□□ 0.83
SMARCD1-201ENST00000381513 OTOAQ7RTW8 1153 aa20.21■□□□□ 0.83
SMARCD1-201ENST00000381513 SYT2Q8N9I0 419 aaPredicted RBP20.21■□□□□ 0.83
SMARCD1-201ENST00000381513 EBF3Q9H4W6 596 aa20.21■□□□□ 0.83
SMARCD1-201ENST00000381513 VAT1LQ9HCJ6 419 aa20.21■□□□□ 0.83
SMARCD1-201ENST00000381513 TDRKHQ9Y2W6 561 aaKnown RBP20.21■□□□□ 0.83
SMARCD1-201ENST00000381513 ASMTLO95671 621 aa20.21■□□□□ 0.83
SMARCD1-201ENST00000381513 PRKCIP41743 596 aa20.21■□□□□ 0.83
SMARCD1-201ENST00000381513 MED21Q13503 144 aa20.21■□□□□ 0.83
SMARCD1-201ENST00000381513 PPP2R3CQ969Q6 453 aa20.21■□□□□ 0.83
SMARCD1-201ENST00000381513 EMILIN3Q9NT22 766 aa20.21■□□□□ 0.83
SMARCD1-201ENST00000381513 ASAP1Q9ULH1 1129 aa20.21■□□□□ 0.83
SMARCD1-201ENST00000381513 TMEM253P0C7T8 217 aa20.2■□□□□ 0.82
SMARCD1-201ENST00000381513 PABPC4LP0CB38 370 aaKnown RBP20.2■□□□□ 0.82
SMARCD1-201ENST00000381513 GOLGA8HP0CJ92 632 aa20.2■□□□□ 0.82
SMARCD1-201ENST00000381513 DLATP10515 647 aaKnown RBP20.2■□□□□ 0.82
SMARCD1-201ENST00000381513 PPATQ06203 517 aa20.2■□□□□ 0.82
SMARCD1-201ENST00000381513 DUS1LQ6P1R4 473 aaKnown RBP20.2■□□□□ 0.82
SMARCD1-201ENST00000381513 LRRC27Q9C0I9 530 aa20.2■□□□□ 0.82
SMARCD1-201ENST00000381513 SH3GLB2Q9NR46 395 aa20.2■□□□□ 0.82
SMARCD1-201ENST00000381513 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.2■□□□□ 0.82
SMARCD1-201ENST00000381513 KCNA6P17658 529 aa20.2■□□□□ 0.82
SMARCD1-201ENST00000381513 LMNB1P20700 586 aa20.2■□□□□ 0.82
SMARCD1-201ENST00000381513 CYLC2Q14093 348 aaPredicted RBP20.2■□□□□ 0.82
SMARCD1-201ENST00000381513 ARHGAP24Q8N264 748 aa20.2■□□□□ 0.82
SMARCD1-201ENST00000381513 TAS2R14Q9NYV8 317 aa20.2■□□□□ 0.82
SMARCD1-201ENST00000381513 NINJ2Q9NZG7 142 aa20.2■□□□□ 0.82
SMARCD1-201ENST00000381513 ANPEPP15144 967 aa20.19■□□□□ 0.82
SMARCD1-201ENST00000381513 ADCY8P40145 1251 aa20.19■□□□□ 0.82
SMARCD1-201ENST00000381513 CDC16Q13042 620 aa20.19■□□□□ 0.82
SMARCD1-201ENST00000381513 RINLQ6ZS11 566 aa20.19■□□□□ 0.82
SMARCD1-201ENST00000381513 KRT25Q7Z3Z0 450 aa20.19■□□□□ 0.82
SMARCD1-201ENST00000381513 PRPF31Q8WWY3 499 aaKnown RBP20.19■□□□□ 0.82
SMARCD1-201ENST00000381513 LZTS2Q9BRK4 669 aa20.19■□□□□ 0.82
SMARCD1-201ENST00000381513 RAB34Q9BZG1 259 aa20.19■□□□□ 0.82
SMARCD1-201ENST00000381513 TRABDQ9H4I3 376 aa20.19■□□□□ 0.82
SMARCD1-201ENST00000381513 FBXO6Q9NRD1 293 aaPredicted RBP20.19■□□□□ 0.82
SMARCD1-201ENST00000381513 TAS2R1Q9NYW7 299 aa20.19■□□□□ 0.82
SMARCD1-201ENST00000381513 PCDHA3Q9Y5H8 950 aa20.19■□□□□ 0.82
SMARCD1-201ENST00000381513 ADGRA3Q8IWK6 1321 aa20.19■□□□□ 0.82
SMARCD1-201ENST00000381513 SMCO2A6NFE2 343 aa20.19■□□□□ 0.82
SMARCD1-201ENST00000381513 SPOPO43791 374 aa20.19■□□□□ 0.82
SMARCD1-201ENST00000381513 CIB2O75838 187 aa20.19■□□□□ 0.82
SMARCD1-201ENST00000381513 PIK3CAP42336 1068 aa20.19■□□□□ 0.82
SMARCD1-201ENST00000381513 ITGA8P53708 1063 aa20.19■□□□□ 0.82
SMARCD1-201ENST00000381513 CTSWP56202 376 aa20.19■□□□□ 0.82
SMARCD1-201ENST00000381513 KBTBD12Q3ZCT8 623 aa20.19■□□□□ 0.82
SMARCD1-201ENST00000381513 TRIM67Q6ZTA4 783 aa20.19■□□□□ 0.82
SMARCD1-201ENST00000381513 CCDC65Q8IXS2 484 aa20.19■□□□□ 0.82
SMARCD1-201ENST00000381513 SLC25A41Q8N5S1 370 aa20.19■□□□□ 0.82
SMARCD1-201ENST00000381513 PNMA1Q8ND90 353 aa20.19■□□□□ 0.82
SMARCD1-201ENST00000381513 CCDC28BQ9BUN5 200 aa20.19■□□□□ 0.82
SMARCD1-201ENST00000381513 ALG13Q9NP73 1137 aaKnown RBP20.19■□□□□ 0.82
SMARCD1-201ENST00000381513 ARFGEF2Q9Y6D5 1785 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms