RNA–Protein interactions for RNA: ENST00000380875.7

FREM1-201, Transcript of FRAS1 related extracellular matrix 1, humanhuman

TSL 1 (best)

Gene FREM1, Length 6,126 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1-201ENST00000380875 SPTLC3Q9NUV7 552 aa9.78□□□□□ -0.84
FREM1-201ENST00000380875 ARHGAP31Q2M1Z3 1444 aa9.77□□□□□ -0.84
FREM1-201ENST00000380875 CTNND1O60716 968 aaKnown RBP9.77□□□□□ -0.84
FREM1-201ENST00000380875 KLRC2P26717 231 aa9.77□□□□□ -0.84
FREM1-201ENST00000380875 AMPD2Q01433 879 aa9.77□□□□□ -0.84
FREM1-201ENST00000380875 BTN2A2Q8WVV5 523 aa9.77□□□□□ -0.84
FREM1-201ENST00000380875 RNF25Q96BH1 459 aaPredicted RBP9.77□□□□□ -0.84
FREM1-201ENST00000380875 PBKQ96KB5 322 aa9.77□□□□□ -0.84
FREM1-201ENST00000380875 AIFM3Q96NN9 605 aa9.77□□□□□ -0.84
FREM1-201ENST00000380875 SLITRK1Q96PX8 696 aa9.77□□□□□ -0.84
FREM1-201ENST00000380875 NUP85Q9BW27 656 aa9.77□□□□□ -0.84
FREM1-201ENST00000380875 INTS9Q9NV88 658 aaKnown RBP9.77□□□□□ -0.84
FREM1-201ENST00000380875 KLK14Q9P0G3 267 aa9.77□□□□□ -0.84
FREM1-201ENST00000380875 MTMR6Q9Y217 621 aa9.77□□□□□ -0.84
FREM1-201ENST00000380875 CDHR2Q9BYE9 1310 aa9.77□□□□□ -0.84
FREM1-201ENST00000380875 TLR2O60603 784 aa9.77□□□□□ -0.85
FREM1-201ENST00000380875 SLFN14P0C7P3 912 aa9.77□□□□□ -0.85
FREM1-201ENST00000380875 IFNAR1P17181 557 aa9.77□□□□□ -0.85
FREM1-201ENST00000380875 ARL4CP56559 192 aa9.77□□□□□ -0.85
FREM1-201ENST00000380875 PDAP1Q13442 181 aaKnown RBP9.77□□□□□ -0.85
FREM1-201ENST00000380875 EMC2Q15006 297 aa9.77□□□□□ -0.85
FREM1-201ENST00000380875 PLCL1Q15111 1095 aa9.77□□□□□ -0.85
FREM1-201ENST00000380875 MAP1SQ66K74 1059 aaPredicted RBP9.77□□□□□ -0.85
FREM1-201ENST00000380875 NOTUMQ6P988 496 aa9.77□□□□□ -0.85
FREM1-201ENST00000380875 SMAP1Q8IYB5 467 aaPredicted RBP9.77□□□□□ -0.85
FREM1-201ENST00000380875 CARNMT1Q8N4J0 409 aa9.77□□□□□ -0.85
FREM1-201ENST00000380875 RFWD2Q8NHY2 731 aa9.77□□□□□ -0.85
FREM1-201ENST00000380875 LRRC37BQ96QE4 947 aa9.77□□□□□ -0.85
FREM1-201ENST00000380875 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.77□□□□□ -0.853e-9■■□□□ 12.8
FREM1-201ENST00000380875 POLR3CQ9BUI4 534 aaPredicted RBP9.77□□□□□ -0.85
FREM1-201ENST00000380875 ZCWPW1Q9H0M4 648 aa9.77□□□□□ -0.85
FREM1-201ENST00000380875 NDST4Q9H3R1 872 aa9.77□□□□□ -0.85
FREM1-201ENST00000380875 THG1LQ9NWX6 298 aaKnown RBP9.77□□□□□ -0.85
FREM1-201ENST00000380875 NCAPD2Q15021 1401 aa9.77□□□□□ -0.85
FREM1-201ENST00000380875 C5orf58C9J3I9 102 aa9.77□□□□□ -0.85
FREM1-201ENST00000380875 PBLDP30039 288 aaPredicted RBP9.77□□□□□ -0.85
FREM1-201ENST00000380875 CHRNA3P32297 505 aa9.77□□□□□ -0.85
FREM1-201ENST00000380875 CLNS1AP54105 237 aaKnown RBP9.77□□□□□ -0.85
FREM1-201ENST00000380875 KIZQ2M2Z5 673 aa9.77□□□□□ -0.85
FREM1-201ENST00000380875 KHDRBS2Q5VWX1 349 aaKnown RBP9.77□□□□□ -0.85
FREM1-201ENST00000380875 KRT39Q6A163 491 aa9.77□□□□□ -0.85
FREM1-201ENST00000380875 UNC13DQ70J99 1090 aa9.77□□□□□ -0.85
FREM1-201ENST00000380875 PATL1Q86TB9 770 aaKnown RBP9.77□□□□□ -0.85
FREM1-201ENST00000380875 SCYL3Q8IZE3 742 aa9.77□□□□□ -0.85
FREM1-201ENST00000380875 MRPS31Q92665 395 aaKnown RBP9.77□□□□□ -0.85
FREM1-201ENST00000380875 ATXN7L3BQ96GX2 97 aa9.77□□□□□ -0.85
FREM1-201ENST00000380875 EPB41L5Q9HCM4 733 aa9.77□□□□□ -0.85
FREM1-201ENST00000380875 FGFR1OP2Q9NVK5 253 aa9.77□□□□□ -0.85
FREM1-201ENST00000380875 NAGPAQ9UK23 515 aa9.77□□□□□ -0.85
FREM1-201ENST00000380875 TRAF3IP3Q9Y228 551 aa9.77□□□□□ -0.85
FREM1-201ENST00000380875 IQSEC2Q5JU85 1478 aa9.77□□□□□ -0.85
FREM1-201ENST00000380875 TBKBP1A7MCY6 615 aa9.77□□□□□ -0.85
FREM1-201ENST00000380875 FAM47E-STBD1D6RA91 191 aa9.77□□□□□ -0.85
FREM1-201ENST00000380875 SUPT20HL2P0C7V6 817 aa9.77□□□□□ -0.85
FREM1-201ENST00000380875 ERVK-10P10266 1014 aa9.77□□□□□ -0.85
FREM1-201ENST00000380875 KITP10721 976 aa9.77□□□□□ -0.85
FREM1-201ENST00000380875 WDR72Q3MJ13 1102 aa9.77□□□□□ -0.85
FREM1-201ENST00000380875 SPDYAQ5MJ70 313 aa9.77□□□□□ -0.85
FREM1-201ENST00000380875 TTC13Q8NBP0 860 aa9.77□□□□□ -0.85
FREM1-201ENST00000380875 TSEN34Q9BSV6 310 aaKnown RBP9.77□□□□□ -0.85
FREM1-201ENST00000380875 RNF208Q9H0X6 261 aa9.77□□□□□ -0.85
FREM1-201ENST00000380875 GIMAP4Q9NUV9 329 aa9.77□□□□□ -0.85
FREM1-201ENST00000380875 CHCHD3Q9NX63 227 aaKnown RBP9.77□□□□□ -0.85
FREM1-201ENST00000380875 CACNA2D2Q9NY47 1150 aa9.77□□□□□ -0.85
FREM1-201ENST00000380875 DPP7Q9UHL4 492 aa9.77□□□□□ -0.85
FREM1-201ENST00000380875 NPC1L1Q9UHC9 1359 aa9.77□□□□□ -0.85
FREM1-201ENST00000380875 KPNA7A9QM74 516 aa9.76□□□□□ -0.85
FREM1-201ENST00000380875 HLA-DPA1P20036 260 aa9.76□□□□□ -0.85
FREM1-201ENST00000380875 EPHB3P54753 998 aa9.76□□□□□ -0.85
FREM1-201ENST00000380875 FAM84BQ96KN1 310 aaPredicted RBP9.76□□□□□ -0.85
FREM1-201ENST00000380875 FAM129AQ9BZQ8 928 aa9.76□□□□□ -0.85
FREM1-201ENST00000380875 TTC37Q6PGP7 1564 aa9.76□□□□□ -0.85
FREM1-201ENST00000380875 KRT72Q14CN4 511 aa9.76□□□□□ -0.85
FREM1-201ENST00000380875 TMEM259Q4ZIN3 620 aa9.76□□□□□ -0.85
FREM1-201ENST00000380875 FBXW10Q5XX13 1052 aa9.76□□□□□ -0.85
FREM1-201ENST00000380875 CYB5R4Q7L1T6 521 aa9.76□□□□□ -0.85
FREM1-201ENST00000380875 PID1Q7Z2X4 250 aa9.76□□□□□ -0.85
FREM1-201ENST00000380875 CHSY1Q86X52 802 aa9.76□□□□□ -0.85
FREM1-201ENST00000380875 SLC25A41Q8N5S1 370 aa9.76□□□□□ -0.85
FREM1-201ENST00000380875 SLC30A1Q9Y6M5 507 aa9.76□□□□□ -0.85
FREM1-201ENST00000380875 CLASP1Q7Z460 1538 aa9.76□□□□□ -0.85
FREM1-201ENST00000380875 MZF1P28698 734 aaPredicted RBP9.76□□□□□ -0.85
FREM1-201ENST00000380875 CHMP1BQ7LBR1 199 aa9.76□□□□□ -0.85
FREM1-201ENST00000380875 ENGASEQ8NFI3 743 aa9.76□□□□□ -0.85
FREM1-201ENST00000380875 SCFD2Q8WU76 684 aa9.76□□□□□ -0.85
FREM1-201ENST00000380875 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.76□□□□□ -0.85
FREM1-201ENST00000380875 EMILIN2Q9BXX0 1053 aa9.76□□□□□ -0.85
FREM1-201ENST00000380875 COPEO14579 308 aa9.76□□□□□ -0.85
FREM1-201ENST00000380875 FASTKD1Q53R41 847 aaKnown RBP9.76□□□□□ -0.85
FREM1-201ENST00000380875 XKR3Q5GH77 459 aa9.76□□□□□ -0.85
FREM1-201ENST00000380875 ATF7IP2Q5U623 682 aa9.76□□□□□ -0.85
FREM1-201ENST00000380875 ACAD11Q709F0 780 aa9.76□□□□□ -0.85
FREM1-201ENST00000380875 RHOT2Q8IXI1 618 aa9.76□□□□□ -0.85
FREM1-201ENST00000380875 FAM151AQ8WW52 585 aa9.76□□□□□ -0.85
FREM1-201ENST00000380875 SH2D3AQ9BRG2 576 aa9.76□□□□□ -0.85
FREM1-201ENST00000380875 A2ML1A8K2U0 1454 aa9.76□□□□□ -0.85
FREM1-201ENST00000380875 NPHP3-ACAD11A0A0J9YXS1 232 aa9.76□□□□□ -0.85
FREM1-201ENST00000380875 EEF2KO00418 725 aaKnown RBP9.76□□□□□ -0.85
FREM1-201ENST00000380875 ACOT2P49753 483 aa9.76□□□□□ -0.85
FREM1-201ENST00000380875 KCTD16Q68DU8 428 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms