RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 NOCTQ9UK39 431 aaKnown RBP13.59□□□□□ -0.23
VPS16-202ENST00000380445 TELO2Q9Y4R8 837 aa13.59□□□□□ -0.23
VPS16-202ENST00000380445 LCTP09848 1927 aa13.58□□□□□ -0.24
VPS16-202ENST00000380445 CYP26A1O43174 497 aa13.58□□□□□ -0.24
VPS16-202ENST00000380445 SYF2O95926 243 aaKnown RBP13.58□□□□□ -0.24
VPS16-202ENST00000380445 PIGRP01833 764 aa13.58□□□□□ -0.24
VPS16-202ENST00000380445 ATP4AP20648 1035 aa13.58□□□□□ -0.24
VPS16-202ENST00000380445 UBA1P22314 1058 aaKnown RBP13.58□□□□□ -0.24
VPS16-202ENST00000380445 C11orf63Q6NUN7 778 aa13.58□□□□□ -0.24
VPS16-202ENST00000380445 KCNV1Q6PIU1 500 aa13.58□□□□□ -0.24
VPS16-202ENST00000380445 MAATS1Q7Z4T9 603 aa13.58□□□□□ -0.24
VPS16-202ENST00000380445 PALB2Q86YC2 1186 aa13.58□□□□□ -0.24
VPS16-202ENST00000380445 KLHL7Q8IXQ5 586 aa13.58□□□□□ -0.24
VPS16-202ENST00000380445 ANKRD13AQ8IZ07 590 aa13.58□□□□□ -0.24
VPS16-202ENST00000380445 CCDC26Q8TAB7 109 aa13.58□□□□□ -0.24
VPS16-202ENST00000380445 TAS1R2Q8TE23 839 aa13.58□□□□□ -0.24
VPS16-202ENST00000380445 WHAMMQ8TF30 809 aa13.58□□□□□ -0.24
VPS16-202ENST00000380445 KAT5Q92993 513 aa13.58□□□□□ -0.24
VPS16-202ENST00000380445 ARHGEF26Q96DR7 871 aa13.58□□□□□ -0.24
VPS16-202ENST00000380445 SLITRK6Q9H5Y7 841 aa13.58□□□□□ -0.24
VPS16-202ENST00000380445 A0A0G2JMZ2 1700 aa13.58□□□□□ -0.24
VPS16-202ENST00000380445 PTPRFP10586 1907 aa13.58□□□□□ -0.24
VPS16-202ENST00000380445 PHACTR2O75167 634 aa13.58□□□□□ -0.24
VPS16-202ENST00000380445 FARP2O94887 1054 aaPredicted RBP13.58□□□□□ -0.24
VPS16-202ENST00000380445 ARL2P36404 184 aa13.58□□□□□ -0.24
VPS16-202ENST00000380445 CLDN10P78369 228 aa13.58□□□□□ -0.24
VPS16-202ENST00000380445 MRPS25P82663 173 aaKnown RBP13.58□□□□□ -0.24
VPS16-202ENST00000380445 PSMD6Q15008 389 aa13.58□□□□□ -0.24
VPS16-202ENST00000380445 WDR44Q5JSH3 913 aa13.58□□□□□ -0.24
VPS16-202ENST00000380445 NOP9Q86U38 636 aaKnown RBP13.58□□□□□ -0.24
VPS16-202ENST00000380445 EXOC8Q8IYI6 725 aa13.58□□□□□ -0.24
VPS16-202ENST00000380445 UBL4BQ8N7F7 174 aa13.58□□□□□ -0.24
VPS16-202ENST00000380445 PSPC1Q8WXF1 523 aaKnown RBP13.58□□□□□ -0.24
VPS16-202ENST00000380445 SEPT1Q8WYJ6 367 aa13.58□□□□□ -0.24
VPS16-202ENST00000380445 TMEM134Q9H6X4 195 aa13.58□□□□□ -0.24
VPS16-202ENST00000380445 C1orf112Q9NSG2 853 aa13.58□□□□□ -0.24
VPS16-202ENST00000380445 CWC15Q9P013 229 aaKnown RBP13.58□□□□□ -0.24
VPS16-202ENST00000380445 LCMT1Q9UIC8 334 aa13.58□□□□□ -0.24
VPS16-202ENST00000380445 AGO2Q9UKV8 859 aaKnown RBP13.58□□□□□ -0.24
VPS16-202ENST00000380445 LRRIQ4A6NIV6 560 aa13.57□□□□□ -0.24
VPS16-202ENST00000380445 RAD51CO43502 376 aa13.57□□□□□ -0.24
VPS16-202ENST00000380445 OPA1O60313 960 aa13.57□□□□□ -0.24
VPS16-202ENST00000380445 RNF40O75150 1001 aa13.57□□□□□ -0.24
VPS16-202ENST00000380445 CYP11B1P15538 503 aa13.57□□□□□ -0.24
VPS16-202ENST00000380445 STAT5BP51692 787 aa13.57□□□□□ -0.24
VPS16-202ENST00000380445 CDR2Q01850 454 aa13.57□□□□□ -0.24
VPS16-202ENST00000380445 CUL1Q13616 776 aa13.57□□□□□ -0.24
VPS16-202ENST00000380445 AFAP1L1Q8TED9 768 aa13.57□□□□□ -0.24
VPS16-202ENST00000380445 IFT81Q8WYA0 676 aa13.57□□□□□ -0.24
VPS16-202ENST00000380445 TMEM143Q96AN5 459 aa13.57□□□□□ -0.24
VPS16-202ENST00000380445 FAM167AQ96KS9 214 aa13.57□□□□□ -0.24
VPS16-202ENST00000380445 RUFY1Q96T51 708 aa13.57□□□□□ -0.24
VPS16-202ENST00000380445 ZC3H4Q9UPT8 1303 aaKnown RBP13.57□□□□□ -0.24
VPS16-202ENST00000380445 GSTTP1A0A1W2PQM5 241 aa13.57□□□□□ -0.24
VPS16-202ENST00000380445 ADM5C9JUS6 153 aa13.57□□□□□ -0.24
VPS16-202ENST00000380445 IRF6O14896 467 aa13.57□□□□□ -0.24
VPS16-202ENST00000380445 SART1O43290 800 aaKnown RBP13.57□□□□□ -0.24
VPS16-202ENST00000380445 HSF2BPO75031 334 aa13.57□□□□□ -0.24
VPS16-202ENST00000380445 MTA2O94776 668 aa13.57□□□□□ -0.24
VPS16-202ENST00000380445 GLRA2P23416 452 aa13.57□□□□□ -0.24
VPS16-202ENST00000380445 GGCXP38435 758 aa13.57□□□□□ -0.24
VPS16-202ENST00000380445 LMAN1P49257 510 aa13.57□□□□□ -0.24
VPS16-202ENST00000380445 ZSCAN26Q16670 478 aa13.57□□□□□ -0.24
VPS16-202ENST00000380445 PTPROQ16827 1216 aa13.57□□□□□ -0.24
VPS16-202ENST00000380445 METTL7BQ6UX53 244 aa13.57□□□□□ -0.24
VPS16-202ENST00000380445 SLC47A2Q86VL8 602 aa13.57□□□□□ -0.24
VPS16-202ENST00000380445 OTUD5Q96G74 571 aa13.57□□□□□ -0.24
VPS16-202ENST00000380445 RPS6KC1Q96S38 1066 aa13.57□□□□□ -0.24
VPS16-202ENST00000380445 AZI2Q9H6S1 392 aa13.57□□□□□ -0.24
VPS16-202ENST00000380445 ELP3Q9H9T3 547 aa13.57□□□□□ -0.24
VPS16-202ENST00000380445 NFU1Q9UMS0 254 aa13.57□□□□□ -0.24
VPS16-202ENST00000380445 GOLGA6L10A0A0M3HER8 536 aa13.56□□□□□ -0.24
VPS16-202ENST00000380445 SOWAHBA6NEL2 793 aa13.56□□□□□ -0.24
VPS16-202ENST00000380445 DDX3YO15523 660 aaKnown RBP13.56□□□□□ -0.24
VPS16-202ENST00000380445 CHRNB2P17787 502 aa13.56□□□□□ -0.24
VPS16-202ENST00000380445 TNNI1P19237 187 aa13.56□□□□□ -0.24
VPS16-202ENST00000380445 CARSP49589 748 aaKnown RBP13.56□□□□□ -0.24
VPS16-202ENST00000380445 BPIFB4P59827 614 aa13.56□□□□□ -0.24
VPS16-202ENST00000380445 FSTL1Q12841 308 aa13.56□□□□□ -0.24
VPS16-202ENST00000380445 C15orf39Q6ZRI6 1047 aa13.56□□□□□ -0.24
VPS16-202ENST00000380445 CNKSR2Q8WXI2 1034 aa13.56□□□□□ -0.24
VPS16-202ENST00000380445 PAGR1Q9BTK6 254 aa13.56□□□□□ -0.24
VPS16-202ENST00000380445 ASCC2Q9H1I8 757 aaPredicted RBP13.56□□□□□ -0.24
VPS16-202ENST00000380445 TAF1DQ9H5J8 278 aaPredicted RBP13.56□□□□□ -0.24
VPS16-202ENST00000380445 TOPORSQ9NS56 1045 aaPredicted RBP13.56□□□□□ -0.24
VPS16-202ENST00000380445 ALG6Q9Y672 507 aa13.56□□□□□ -0.24
VPS16-202ENST00000380445 SBF1O95248 1867 aa13.56□□□□□ -0.24
VPS16-202ENST00000380445 FMO1Q01740 532 aa13.56□□□□□ -0.24
VPS16-202ENST00000380445 TARBP2Q15633 366 aaKnown RBP13.56□□□□□ -0.24
VPS16-202ENST00000380445 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.56□□□□□ -0.24
VPS16-202ENST00000380445 ASAP3Q8TDY4 903 aa13.56□□□□□ -0.24
VPS16-202ENST00000380445 ZNF526Q8TF50 670 aaPredicted RBP13.56□□□□□ -0.24
VPS16-202ENST00000380445 AP1M1Q9BXS5 423 aa13.56□□□□□ -0.24
VPS16-202ENST00000380445 RNF181Q9P0P0 153 aa13.56□□□□□ -0.24
VPS16-202ENST00000380445 UVRAGQ9P2Y5 699 aa13.56□□□□□ -0.24
VPS16-202ENST00000380445 COG5Q9UP83 839 aa13.56□□□□□ -0.24
VPS16-202ENST00000380445 AGTPBP1Q9UPW5 1226 aa13.56□□□□□ -0.24
VPS16-202ENST00000380445 SPDYE5A6NIY4 337 aa13.55□□□□□ -0.24
VPS16-202ENST00000380445 GAS2O43903 313 aaKnown RBP13.55□□□□□ -0.24
VPS16-202ENST00000380445 FGGP02679 453 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms