RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 NOTUMQ6P988 496 aa26.65■■□□□ 1.86
ECHDC3-201ENST00000379215 CACNA2D4Q7Z3S7 1137 aa26.65■■□□□ 1.86
ECHDC3-201ENST00000379215 OR8K1Q8NGG5 319 aa26.65■■□□□ 1.86
ECHDC3-201ENST00000379215 CRACR2AQ9BSW2 395 aa26.65■■□□□ 1.86
ECHDC3-201ENST00000379215 CPSF3Q9UKF6 684 aaKnown RBP26.65■■□□□ 1.86
ECHDC3-201ENST00000379215 RFX1P22670 979 aa26.64■■□□□ 1.85
ECHDC3-201ENST00000379215 PON1P27169 355 aa26.64■■□□□ 1.85
ECHDC3-201ENST00000379215 LRMPQ12912 555 aa26.64■■□□□ 1.85
ECHDC3-201ENST00000379215 CBWD6Q4V339 395 aa26.64■■□□□ 1.85
ECHDC3-201ENST00000379215 CBWD3Q5JTY5 395 aa26.64■■□□□ 1.85
ECHDC3-201ENST00000379215 CBWD5Q5RIA9 395 aa26.64■■□□□ 1.85
ECHDC3-201ENST00000379215 C1orf220Q5T0J3 134 aa26.64■■□□□ 1.85
ECHDC3-201ENST00000379215 PLEKHO2Q8TD55 490 aa26.64■■□□□ 1.85
ECHDC3-201ENST00000379215 DNAJC7Q99615 494 aa26.64■■□□□ 1.85
ECHDC3-201ENST00000379215 BAG1Q99933 345 aaPredicted RBP26.64■■□□□ 1.85
ECHDC3-201ENST00000379215 TMX1Q9H3N1 280 aa26.64■■□□□ 1.85
ECHDC3-201ENST00000379215 CSDE1O75534 798 aaKnown RBP26.63■■□□□ 1.85
ECHDC3-201ENST00000379215 DLATP10515 647 aaKnown RBP26.63■■□□□ 1.85
ECHDC3-201ENST00000379215 CCZ1BP86790 482 aa26.63■■□□□ 1.85
ECHDC3-201ENST00000379215 CCZ1P86791 482 aaPredicted RBP26.63■■□□□ 1.85
ECHDC3-201ENST00000379215 PPP3CAQ08209 521 aa26.63■■□□□ 1.85
ECHDC3-201ENST00000379215 PKN2Q16513 984 aaKnown RBP26.63■■□□□ 1.85
ECHDC3-201ENST00000379215 EEF1DP3Q658K8 133 aa26.63■■□□□ 1.85
ECHDC3-201ENST00000379215 ZNHIT6Q9NWK9 470 aaKnown RBP26.63■■□□□ 1.85
ECHDC3-201ENST00000379215 CCL5P13501 91 aa26.62■■□□□ 1.85
ECHDC3-201ENST00000379215 GCLMP48507 274 aa26.62■■□□□ 1.85
ECHDC3-201ENST00000379215 FBXO46Q6PJ61 603 aaPredicted RBP26.62■■□□□ 1.85
ECHDC3-201ENST00000379215 SLC43A3Q8NBI5 491 aa26.62■■□□□ 1.85
ECHDC3-201ENST00000379215 CGRRF1Q99675 332 aa26.62■■□□□ 1.85
ECHDC3-201ENST00000379215 RNF208Q9H0X6 261 aa26.62■■□□□ 1.85
ECHDC3-201ENST00000379215 AGPAT5Q9NUQ2 364 aa26.62■■□□□ 1.85
ECHDC3-201ENST00000379215 IL18RAPO95256 599 aa26.61■■□□□ 1.85
ECHDC3-201ENST00000379215 CLTAP09496 248 aa26.61■■□□□ 1.85
ECHDC3-201ENST00000379215 KCNJ6P48051 423 aa26.61■■□□□ 1.85
ECHDC3-201ENST00000379215 SLC27A1Q6PCB7 646 aa26.61■■□□□ 1.85
ECHDC3-201ENST00000379215 TRIM65Q6PJ69 517 aa26.61■■□□□ 1.85
ECHDC3-201ENST00000379215 CPB2Q96IY4 423 aa26.61■■□□□ 1.85
ECHDC3-201ENST00000379215 TMEM117Q9H0C3 514 aa26.61■■□□□ 1.85
ECHDC3-201ENST00000379215 CDHR5Q9HBB8 845 aa26.61■■□□□ 1.85
ECHDC3-201ENST00000379215 OGDHLQ9ULD0 1010 aa26.61■■□□□ 1.85
ECHDC3-201ENST00000379215 MYO6Q9UM54 1294 aa26.61■■□□□ 1.85
ECHDC3-201ENST00000379215 CDY2AQ9Y6F7 541 aa26.61■■□□□ 1.85
ECHDC3-201ENST00000379215 ARHGAP6O43182 974 aa26.61■■□□□ 1.85
ECHDC3-201ENST00000379215 HSPA8P11142 646 aaKnown RBP26.61■■□□□ 1.85
ECHDC3-201ENST00000379215 TNNI1P19237 187 aa26.61■■□□□ 1.85
ECHDC3-201ENST00000379215 FECHP22830 423 aa26.61■■□□□ 1.85
ECHDC3-201ENST00000379215 KLHDC7AQ5VTJ3 777 aa26.61■■□□□ 1.85
ECHDC3-201ENST00000379215 WDR49Q8IV35 697 aa26.61■■□□□ 1.85
ECHDC3-201ENST00000379215 FMNL3Q8IVF7 1028 aa26.61■■□□□ 1.85
ECHDC3-201ENST00000379215 DEFB118Q96PH6 123 aa26.61■■□□□ 1.85
ECHDC3-201ENST00000379215 INTS2Q9H0H0 1204 aaKnown RBP26.61■■□□□ 1.85
ECHDC3-201ENST00000379215 GANQ9H2C0 597 aa26.61■■□□□ 1.85
ECHDC3-201ENST00000379215 RPF1Q9H9Y2 349 aaKnown RBP26.61■■□□□ 1.85
ECHDC3-201ENST00000379215 COQ4Q9Y3A0 265 aa26.61■■□□□ 1.85
ECHDC3-201ENST00000379215 ESPNB1AK53 854 aa26.6■■□□□ 1.85
ECHDC3-201ENST00000379215 SLC9A1P19634 815 aa26.6■■□□□ 1.85
ECHDC3-201ENST00000379215 GOLGA8FQ08AF8 430 aa26.6■■□□□ 1.85
ECHDC3-201ENST00000379215 GOLGA8DPQ0D2H9 430 aa26.6■■□□□ 1.85
ECHDC3-201ENST00000379215 EPC2Q52LR7 807 aa26.6■■□□□ 1.85
ECHDC3-201ENST00000379215 ZBTB41Q5SVQ8 909 aa26.6■■□□□ 1.85
ECHDC3-201ENST00000379215 TMTC1Q8IUR5 882 aa26.6■■□□□ 1.85
ECHDC3-201ENST00000379215 THNSL1Q8IYQ7 743 aa26.6■■□□□ 1.85
ECHDC3-201ENST00000379215 EHBP1Q8NDI1 1231 aa26.6■■□□□ 1.85
ECHDC3-201ENST00000379215 SENP6Q9GZR1 1112 aaPredicted RBP26.6■■□□□ 1.85
ECHDC3-201ENST00000379215 NOL4O94818 638 aa26.59■■□□□ 1.85
ECHDC3-201ENST00000379215 UCHL3P15374 230 aa26.59■■□□□ 1.85
ECHDC3-201ENST00000379215 FBXL13Q8NEE6 735 aa26.59■■□□□ 1.85
ECHDC3-201ENST00000379215 SYN2Q92777 582 aaPredicted RBP26.59■■□□□ 1.85
ECHDC3-201ENST00000379215 PDE11AQ9HCR9 933 aa26.59■■□□□ 1.85
ECHDC3-201ENST00000379215 PCNTO95613 3336 aa26.59■■□□□ 1.85
ECHDC3-201ENST00000379215 ARVCFO00192 962 aa26.58■■□□□ 1.85
ECHDC3-201ENST00000379215 EPHB6O15197 1021 aa26.58■■□□□ 1.85
ECHDC3-201ENST00000379215 HOXA11P31270 313 aaPredicted RBP26.58■■□□□ 1.85
ECHDC3-201ENST00000379215 HNRNPH3P31942 346 aaKnown RBP26.58■■□□□ 1.85
ECHDC3-201ENST00000379215 THPOP40225 353 aa26.58■■□□□ 1.85
ECHDC3-201ENST00000379215 POLR2FP61218 127 aaKnown RBP26.58■■□□□ 1.85
ECHDC3-201ENST00000379215 MTFR1Q15390 333 aa26.58■■□□□ 1.85
ECHDC3-201ENST00000379215 CYP26C1Q6V0L0 522 aa26.58■■□□□ 1.85
ECHDC3-201ENST00000379215 TMEM40Q8WWA1 233 aa26.58■■□□□ 1.85
ECHDC3-201ENST00000379215 APEX2Q9UBZ4 518 aa26.58■■□□□ 1.85
ECHDC3-201ENST00000379215 ZC3H11AO75152 810 aaKnown RBP eCLIP26.57■■□□□ 1.84
ECHDC3-201ENST00000379215 STAG3L1P0CL83 205 aa26.57■■□□□ 1.84
ECHDC3-201ENST00000379215 TNFSF9P41273 254 aa26.57■■□□□ 1.84
ECHDC3-201ENST00000379215 GRM5P41594 1212 aa26.57■■□□□ 1.84
ECHDC3-201ENST00000379215 CTCFP49711 727 aaPredicted RBP26.57■■□□□ 1.84
ECHDC3-201ENST00000379215 MGAT3Q09327 533 aa26.57■■□□□ 1.84
ECHDC3-201ENST00000379215 C15orf39Q6ZRI6 1047 aa26.57■■□□□ 1.84
ECHDC3-201ENST00000379215 SV2AQ7L0J3 742 aa26.57■■□□□ 1.84
ECHDC3-201ENST00000379215 TMEM139Q8IV31 216 aa26.57■■□□□ 1.84
ECHDC3-201ENST00000379215 CD302Q8IX05 232 aa26.57■■□□□ 1.84
ECHDC3-201ENST00000379215 BAP1Q92560 729 aa26.57■■□□□ 1.84
ECHDC3-201ENST00000379215 FAM81BQ96LP2 452 aa26.57■■□□□ 1.84
ECHDC3-201ENST00000379215 CCDC94Q9BW85 323 aaPredicted RBP26.57■■□□□ 1.84
ECHDC3-201ENST00000379215 EIF2AK3Q9NZJ5 1116 aaKnown RBP26.57■■□□□ 1.84
ECHDC3-201ENST00000379215 PIN4Q9Y237 131 aaKnown RBP26.57■■□□□ 1.84
ECHDC3-201ENST00000379215 HTTP42858 3142 aa26.57■■□□□ 1.84
ECHDC3-201ENST00000379215 TRIP12Q14669 1992 aaPredicted RBP26.57■■□□□ 1.84
ECHDC3-201ENST00000379215 RNF225M0QZC1 329 aaPredicted RBP26.57■■□□□ 1.84
ECHDC3-201ENST00000379215 TULP1O00294 542 aaPredicted RBP26.57■■□□□ 1.84
ECHDC3-201ENST00000379215 B4GALT4O60513 344 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms