RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 NUP62CLQ9H1M0 184 aa13.02□□□□□ -0.33
PCNA-201ENST00000379143 PARP2Q9UGN5 583 aa13.02□□□□□ -0.33
PCNA-201ENST00000379143 RWDD3Q9Y3V2 267 aa13.02□□□□□ -0.33
PCNA-201ENST00000379143 HES2Q9Y543 173 aa13.02□□□□□ -0.33
PCNA-201ENST00000379143 LINC01553A4QN01 128 aa13.01□□□□□ -0.33
PCNA-201ENST00000379143 ANKRD63C9JTQ0 380 aa13.01□□□□□ -0.33
PCNA-201ENST00000379143 INPPL1O15357 1258 aa13.01□□□□□ -0.33
PCNA-201ENST00000379143 LDHAP00338 332 aaKnown RBP13.01□□□□□ -0.33
PCNA-201ENST00000379143 CLTAP09496 248 aa13.01□□□□□ -0.33
PCNA-201ENST00000379143 HARSP12081 509 aaKnown RBP13.01□□□□□ -0.33
PCNA-201ENST00000379143 MYOGP15173 224 aa13.01□□□□□ -0.33
PCNA-201ENST00000379143 AKAP5P24588 427 aa13.01□□□□□ -0.33
PCNA-201ENST00000379143 PPP1R2P41236 205 aa13.01□□□□□ -0.33
PCNA-201ENST00000379143 POU5F1Q01860 360 aaKnown RBP13.01□□□□□ -0.33
PCNA-201ENST00000379143 COBLL1Q53SF7 1204 aa13.01□□□□□ -0.33
PCNA-201ENST00000379143 NOMO2Q5JPE7 1267 aa13.01□□□□□ -0.33
PCNA-201ENST00000379143 CLLU1OSQ5K130 101 aa13.01□□□□□ -0.33
PCNA-201ENST00000379143 PPP2R2DQ66LE6 453 aa13.01□□□□□ -0.33
PCNA-201ENST00000379143 ARMCX5Q6P1M9 558 aa13.01□□□□□ -0.33
PCNA-201ENST00000379143 SLC39A4Q6P5W5 647 aa13.01□□□□□ -0.33
PCNA-201ENST00000379143 THNSL1Q8IYQ7 743 aa13.01□□□□□ -0.33
PCNA-201ENST00000379143 GUF1Q8N442 669 aaKnown RBP13.01□□□□□ -0.33
PCNA-201ENST00000379143 TRIML1Q8N9V2 468 aa13.01□□□□□ -0.33
PCNA-201ENST00000379143 ACAP3Q96P50 834 aa13.01□□□□□ -0.33
PCNA-201ENST00000379143 RPS6KC1Q96S38 1066 aa13.01□□□□□ -0.33
PCNA-201ENST00000379143 NKX2-4Q9H2Z4 354 aa13.01□□□□□ -0.33
PCNA-201ENST00000379143 CLSTN2Q9H4D0 955 aa13.01□□□□□ -0.33
PCNA-201ENST00000379143 AAASQ9NRG9 546 aa13.01□□□□□ -0.33
PCNA-201ENST00000379143 RNF19AQ9NV58 838 aa13.01□□□□□ -0.33
PCNA-201ENST00000379143 SNTG2Q9NY99 539 aa13.01□□□□□ -0.33
PCNA-201ENST00000379143 KIAA1468Q9P260 1216 aa13.01□□□□□ -0.33
PCNA-201ENST00000379143 YBX2Q9Y2T7 364 aaKnown RBP13.01□□□□□ -0.33
PCNA-201ENST00000379143 FNDC1Q4ZHG4 1894 aaPredicted RBP13.01□□□□□ -0.33
PCNA-201ENST00000379143 LCHNA4D1U4 455 aa13□□□□□ -0.33
PCNA-201ENST00000379143 ARL5CA6NH57 179 aa13□□□□□ -0.33
PCNA-201ENST00000379143 MEIS3P2A8K0S8 358 aa13□□□□□ -0.33
PCNA-201ENST00000379143 RECQL4O94761 1208 aa13□□□□□ -0.33
PCNA-201ENST00000379143 HOXD13P35453 343 aa13□□□□□ -0.33
PCNA-201ENST00000379143 MLH1P40692 756 aa13□□□□□ -0.33
PCNA-201ENST00000379143 RNASELQ05823 741 aaKnown RBP13□□□□□ -0.33
PCNA-201ENST00000379143 STIM1Q13586 685 aa13□□□□□ -0.33
PCNA-201ENST00000379143 CAMK4Q16566 473 aa13□□□□□ -0.33
PCNA-201ENST00000379143 PAN2Q504Q3 1202 aaKnown RBP13□□□□□ -0.33
PCNA-201ENST00000379143 ZNF697Q5TEC3 545 aa13□□□□□ -0.33
PCNA-201ENST00000379143 NELFCDQ8IXH7 590 aa13□□□□□ -0.33
PCNA-201ENST00000379143 GPT2Q8TD30 523 aa13□□□□□ -0.33
PCNA-201ENST00000379143 ERCC4Q92889 916 aaPredicted RBP13□□□□□ -0.33
PCNA-201ENST00000379143 CLP1Q92989 425 aaKnown RBP13□□□□□ -0.33
PCNA-201ENST00000379143 TGS1Q96RS0 853 aaKnown RBP13□□□□□ -0.33
PCNA-201ENST00000379143 PLEKHA5Q9HAU0 1116 aa13□□□□□ -0.33
PCNA-201ENST00000379143 KIAA1586Q9HCI6 787 aa13□□□□□ -0.33
PCNA-201ENST00000379143 AGO2Q9UKV8 859 aaKnown RBP13□□□□□ -0.33
PCNA-201ENST00000379143 INPP5FQ9Y2H2 1132 aa13□□□□□ -0.33
PCNA-201ENST00000379143 GDAQ9Y2T3 454 aa13□□□□□ -0.33
PCNA-201ENST00000379143 PDXKO00764 312 aa12.99□□□□□ -0.33
PCNA-201ENST00000379143 TGFB1I1O43294 461 aa12.99□□□□□ -0.33
PCNA-201ENST00000379143 LAG3P18627 525 aa12.99□□□□□ -0.33
PCNA-201ENST00000379143 ADSSP30520 456 aa12.99□□□□□ -0.33
PCNA-201ENST00000379143 GATMP50440 423 aa12.99□□□□□ -0.33
PCNA-201ENST00000379143 OSTNP61366 133 aa12.99□□□□□ -0.33
PCNA-201ENST00000379143 TAP1Q03518 808 aa12.99□□□□□ -0.33
PCNA-201ENST00000379143 GRIK3Q13003 919 aa12.99□□□□□ -0.33
PCNA-201ENST00000379143 SPOUT1Q5T280 376 aaKnown RBP12.99□□□□□ -0.33
PCNA-201ENST00000379143 CEP120Q8N960 986 aa12.99□□□□□ -0.33
PCNA-201ENST00000379143 TMEM174Q8WUU8 243 aa12.99□□□□□ -0.33
PCNA-201ENST00000379143 FAM193BQ96PV7 902 aaPredicted RBP12.99□□□□□ -0.33
PCNA-201ENST00000379143 TSPAN18Q96SJ8 248 aa12.99□□□□□ -0.33
PCNA-201ENST00000379143 GAD1Q99259 594 aa12.99□□□□□ -0.33
PCNA-201ENST00000379143 HAPLN2Q9GZV7 340 aa12.99□□□□□ -0.33
PCNA-201ENST00000379143 AGPAT3Q9NRZ7 376 aa12.99□□□□□ -0.33
PCNA-201ENST00000379143 TYW1Q9NV66 732 aaKnown RBP12.99□□□□□ -0.33
PCNA-201ENST00000379143 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.99□□□□□ -0.33
PCNA-201ENST00000379143 MRPL42Q9Y6G3 142 aaKnown RBP12.99□□□□□ -0.33
PCNA-201ENST00000379143 RALGAPA2Q2PPJ7 1873 aa12.99□□□□□ -0.33
PCNA-201ENST00000379143 TISP43B9A030 160 aa12.98□□□□□ -0.33
PCNA-201ENST00000379143 CALUO43852 315 aaPredicted RBP12.98□□□□□ -0.33
PCNA-201ENST00000379143 FAM189A1O60320 539 aa12.98□□□□□ -0.33
PCNA-201ENST00000379143 RB1P06400 928 aa12.98□□□□□ -0.33
PCNA-201ENST00000379143 THP07101 528 aa12.98□□□□□ -0.33
PCNA-201ENST00000379143 ERVK-21P61565 698 aa12.98□□□□□ -0.33
PCNA-201ENST00000379143 PPP2R3AQ06190 1150 aa12.98□□□□□ -0.33
PCNA-201ENST00000379143 MORC3Q14149 939 aa12.98□□□□□ -0.33
PCNA-201ENST00000379143 MYBPC2Q14324 1141 aa12.98□□□□□ -0.33
PCNA-201ENST00000379143 XKR4Q5GH76 650 aa12.98□□□□□ -0.33
PCNA-201ENST00000379143 CD302Q8IX05 232 aa12.98□□□□□ -0.33
PCNA-201ENST00000379143 C12orf56Q8IXR9 622 aa12.98□□□□□ -0.33
PCNA-201ENST00000379143 TMEM192Q8IY95 271 aa12.98□□□□□ -0.33
PCNA-201ENST00000379143 SNX27Q96L92 541 aa12.98□□□□□ -0.33
PCNA-201ENST00000379143 ZFP42Q96MM3 310 aa12.98□□□□□ -0.33
PCNA-201ENST00000379143 CDX2Q99626 313 aaPredicted RBP12.98□□□□□ -0.33
PCNA-201ENST00000379143 CBWD1Q9BRT8 395 aa12.98□□□□□ -0.33
PCNA-201ENST00000379143 PLVAPQ9BX97 442 aa12.98□□□□□ -0.33
PCNA-201ENST00000379143 IKZF4Q9H2S9 585 aa12.98□□□□□ -0.33
PCNA-201ENST00000379143 KCTD10Q9H3F6 313 aa12.98□□□□□ -0.33
PCNA-201ENST00000379143 ZNF576Q9H609 170 aa12.98□□□□□ -0.33
PCNA-201ENST00000379143 CWH43Q9H720 699 aa12.98□□□□□ -0.33
PCNA-201ENST00000379143 RPF1Q9H9Y2 349 aaKnown RBP12.98□□□□□ -0.33
PCNA-201ENST00000379143 TBC1D13Q9NVG8 400 aa12.98□□□□□ -0.33
PCNA-201ENST00000379143 KLK14Q9P0G3 267 aa12.98□□□□□ -0.33
PCNA-201ENST00000379143 CPSF3Q9UKF6 684 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms