RNA–Protein interactions for RNA: ENST00000378961.8

CHGB-201, Transcript of chromogranin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHGB, Length 2,550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGB-201ENST00000378961 LRRC42Q9Y546 428 aa13.62□□□□□ -0.23
CHGB-201ENST00000378961 GOLGA6L10A0A0M3HER8 536 aa13.61□□□□□ -0.23
CHGB-201ENST00000378961 BTNL10A8MVZ5 291 aa13.61□□□□□ -0.23
CHGB-201ENST00000378961 LIN7AO14910 233 aaPredicted RBP13.61□□□□□ -0.23
CHGB-201ENST00000378961 ROR2Q01974 943 aaKnown RBP13.61□□□□□ -0.23
CHGB-201ENST00000378961 ARHGAP44Q17R89 818 aa13.61□□□□□ -0.23
CHGB-201ENST00000378961 MUM1Q2TAK8 710 aa13.61□□□□□ -0.23
CHGB-201ENST00000378961 APBB1IPQ7Z5R6 666 aaPredicted RBP13.61□□□□□ -0.23
CHGB-201ENST00000378961 LMNTD2Q8IXW0 634 aa13.61□□□□□ -0.23
CHGB-201ENST00000378961 DTX3LQ8TDB6 740 aa13.61□□□□□ -0.23
CHGB-201ENST00000378961 DNAJC9Q8WXX5 260 aa13.61□□□□□ -0.23
CHGB-201ENST00000378961 TBC1D10AQ9BXI6 508 aa13.61□□□□□ -0.23
CHGB-201ENST00000378961 TRIM4Q9C037 500 aa13.61□□□□□ -0.23
CHGB-201ENST00000378961 CYP39A1Q9NYL5 469 aa13.61□□□□□ -0.23
CHGB-201ENST00000378961 STK17AQ9UEE5 414 aa13.61□□□□□ -0.23
CHGB-201ENST00000378961 DDX25Q9UHL0 483 aaKnown RBP13.61□□□□□ -0.23
CHGB-201ENST00000378961 CHKBQ9Y259 395 aa13.61□□□□□ -0.23
CHGB-201ENST00000378961 NUMBLQ9Y6R0 609 aa13.61□□□□□ -0.23
CHGB-201ENST00000378961 USP17L15C9J2P7 530 aa13.61□□□□□ -0.23
CHGB-201ENST00000378961 USP17L13C9JLJ4 530 aa13.61□□□□□ -0.23
CHGB-201ENST00000378961 USP17L11C9JVI0 530 aa13.61□□□□□ -0.23
CHGB-201ENST00000378961 USP17L18D6R9N7 530 aa13.61□□□□□ -0.23
CHGB-201ENST00000378961 USP17L22D6RA61 530 aa13.61□□□□□ -0.23
CHGB-201ENST00000378961 USP17L17D6RBQ6 530 aa13.61□□□□□ -0.23
CHGB-201ENST00000378961 USP17L19D6RCP7 530 aa13.61□□□□□ -0.23
CHGB-201ENST00000378961 USP17L20D6RJB6 530 aa13.61□□□□□ -0.23
CHGB-201ENST00000378961 CHRNB2P17787 502 aa13.61□□□□□ -0.23
CHGB-201ENST00000378961 VCAM1P19320 739 aa13.61□□□□□ -0.23
CHGB-201ENST00000378961 ATP6V1C1P21283 382 aa13.61□□□□□ -0.23
CHGB-201ENST00000378961 GBP1P32455 592 aa13.61□□□□□ -0.23
CHGB-201ENST00000378961 SNAP25P60880 206 aa13.61□□□□□ -0.23
CHGB-201ENST00000378961 USP17L24Q0WX57 530 aa13.61□□□□□ -0.23
CHGB-201ENST00000378961 SLC5A9Q2M3M2 681 aa13.61□□□□□ -0.23
CHGB-201ENST00000378961 HP1BP3Q5SSJ5 553 aaPredicted RBP13.61□□□□□ -0.23
CHGB-201ENST00000378961 USP17L6PQ6QN14 398 aa13.61□□□□□ -0.23
CHGB-201ENST00000378961 INTS8Q75QN2 995 aaKnown RBP13.61□□□□□ -0.23
CHGB-201ENST00000378961 TAOK1Q7L7X3 1001 aa13.61□□□□□ -0.23
CHGB-201ENST00000378961 CKAP2Q8WWK9 683 aa13.61□□□□□ -0.23
CHGB-201ENST00000378961 UBE2OQ9C0C9 1292 aaKnown RBP13.61□□□□□ -0.23
CHGB-201ENST00000378961 GLT8D2Q9H1C3 349 aa13.61□□□□□ -0.23
CHGB-201ENST00000378961 PCDHA2Q9Y5H9 948 aa13.61□□□□□ -0.23
CHGB-201ENST00000378961 SPDYE2BA6NHP3 402 aa13.6□□□□□ -0.23
CHGB-201ENST00000378961 SFI1A8K8P3 1242 aa13.6□□□□□ -0.23
CHGB-201ENST00000378961 CETN3O15182 167 aa13.6□□□□□ -0.23
CHGB-201ENST00000378961 SPDYE6P0CI01 402 aa13.6□□□□□ -0.23
CHGB-201ENST00000378961 CLK2P49760 499 aaKnown RBP13.6□□□□□ -0.23
CHGB-201ENST00000378961 FXR2P51116 673 aaKnown RBP eCLIP13.6□□□□□ -0.23
CHGB-201ENST00000378961 RCN2Q14257 317 aa13.6□□□□□ -0.23
CHGB-201ENST00000378961 KHDC1Q4VXA5 237 aaKnown RBP13.6□□□□□ -0.23
CHGB-201ENST00000378961 ZC3H12AQ5D1E8 599 aaKnown RBP13.6□□□□□ -0.23
CHGB-201ENST00000378961 MFN1Q8IWA4 741 aa13.6□□□□□ -0.23
CHGB-201ENST00000378961 GALNT15Q8N3T1 639 aa13.6□□□□□ -0.23
CHGB-201ENST00000378961 C1orf54Q8WWF1 131 aa13.6□□□□□ -0.23
CHGB-201ENST00000378961 TRIM7Q9C029 511 aa13.6□□□□□ -0.23
CHGB-201ENST00000378961 AAASQ9NRG9 546 aa13.6□□□□□ -0.23
CHGB-201ENST00000378961 NMRK1Q9NWW6 199 aa13.6□□□□□ -0.23
CHGB-201ENST00000378961 LMCD1Q9NZU5 365 aa13.6□□□□□ -0.23
CHGB-201ENST00000378961 WDR35Q9P2L0 1181 aa13.6□□□□□ -0.23
CHGB-201ENST00000378961 GOLGB1Q14789 3259 aaKnown RBP13.6□□□□□ -0.23
CHGB-201ENST00000378961 POTEFA5A3E0 1075 aa13.6□□□□□ -0.23
CHGB-201ENST00000378961 RSPH10B2B2RC85 870 aa13.6□□□□□ -0.23
CHGB-201ENST00000378961 NDUFB10O96000 172 aa13.6□□□□□ -0.23
CHGB-201ENST00000378961 VIL1P09327 827 aaKnown RBP13.6□□□□□ -0.23
CHGB-201ENST00000378961 RSPH10BP0C881 870 aa13.6□□□□□ -0.23
CHGB-201ENST00000378961 POTEIP0CG38 1075 aa13.6□□□□□ -0.23
CHGB-201ENST00000378961 PYGBP11216 843 aa13.6□□□□□ -0.23
CHGB-201ENST00000378961 CCNB1P14635 433 aa13.6□□□□□ -0.23
CHGB-201ENST00000378961 HOXD13P35453 343 aa13.6□□□□□ -0.23
CHGB-201ENST00000378961 KLC1Q07866 573 aa13.6□□□□□ -0.23
CHGB-201ENST00000378961 POTEGQ6S5H5 508 aa13.6□□□□□ -0.23
CHGB-201ENST00000378961 POTEEQ6S8J3 1075 aa13.6□□□□□ -0.23
CHGB-201ENST00000378961 SYCE1Q8N0S2 351 aa13.6□□□□□ -0.23
CHGB-201ENST00000378961 GMCL1P1Q8NEA9 526 aa13.6□□□□□ -0.23
CHGB-201ENST00000378961 SLC20A1Q8WUM9 679 aa13.6□□□□□ -0.23
CHGB-201ENST00000378961 ATG4AQ8WYN0 398 aa13.6□□□□□ -0.23
CHGB-201ENST00000378961 PITPNM3Q9BZ71 974 aa13.6□□□□□ -0.23
CHGB-201ENST00000378961 ZNF70Q9UC06 446 aaPredicted RBP13.6□□□□□ -0.23
CHGB-201ENST00000378961 PCDHA3Q9Y5H8 950 aa13.6□□□□□ -0.23
CHGB-201ENST00000378961 ATRNL1Q5VV63 1379 aa13.6□□□□□ -0.23
CHGB-201ENST00000378961 UBTFL6P0CB48 400 aaPredicted RBP13.59□□□□□ -0.23
CHGB-201ENST00000378961 T-ENOLP0DO92 83 aa13.59□□□□□ -0.23
CHGB-201ENST00000378961 DLATP10515 647 aaKnown RBP13.59□□□□□ -0.23
CHGB-201ENST00000378961 BMP3P12645 472 aa13.59□□□□□ -0.23
CHGB-201ENST00000378961 ETS2P15036 469 aa13.59□□□□□ -0.23
CHGB-201ENST00000378961 TAC1P20366 129 aa13.59□□□□□ -0.23
CHGB-201ENST00000378961 YY1P25490 414 aa13.59□□□□□ -0.23
CHGB-201ENST00000378961 ALDH3A1P30838 453 aa13.59□□□□□ -0.23
CHGB-201ENST00000378961 CCNG1P51959 295 aa13.59□□□□□ -0.23
CHGB-201ENST00000378961 PSMC6P62333 389 aa13.59□□□□□ -0.23
CHGB-201ENST00000378961 JAG1P78504 1218 aa13.59□□□□□ -0.23
CHGB-201ENST00000378961 PDIA5Q14554 519 aa13.59□□□□□ -0.23
CHGB-201ENST00000378961 RRP1BQ14684 758 aaKnown RBP13.59□□□□□ -0.23
CHGB-201ENST00000378961 MESDQ14696 234 aa13.59□□□□□ -0.23
CHGB-201ENST00000378961 EPHA7Q15375 998 aa13.59□□□□□ -0.23
CHGB-201ENST00000378961 USH1GQ495M9 461 aa13.59□□□□□ -0.23
CHGB-201ENST00000378961 TNFAIP8L3Q5GJ75 292 aa13.59□□□□□ -0.23
CHGB-201ENST00000378961 CAPN12Q6ZSI9 719 aa13.59□□□□□ -0.23
CHGB-201ENST00000378961 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.59□□□□□ -0.23
CHGB-201ENST00000378961 ZC3H18Q86VM9 953 aaKnown RBP13.59□□□□□ -0.23
CHGB-201ENST00000378961 NRG4Q8WWG1 115 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms