RNA–Protein interactions for RNA: ENST00000378513.7

RER1-203, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 3,000 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-203ENST00000378513 HP1BP3Q5SSJ5 553 aaPredicted RBP16.52■□□□□ 0.23
RER1-203ENST00000378513 PRPF38AQ8NAV1 312 aaKnown RBP16.52■□□□□ 0.23
RER1-203ENST00000378513 BICD1Q96G01 975 aa16.52■□□□□ 0.23
RER1-203ENST00000378513 CHST7Q9NS84 486 aa16.52■□□□□ 0.23
RER1-203ENST00000378513 PHF2O75151 1096 aa16.51■□□□□ 0.23
RER1-203ENST00000378513 FNTAP49354 379 aa16.51■□□□□ 0.23
RER1-203ENST00000378513 WNT7BP56706 349 aa16.51■□□□□ 0.23
RER1-203ENST00000378513 BYSLQ13895 437 aaKnown RBP16.51■□□□□ 0.23
RER1-203ENST00000378513 RHOT2Q8IXI1 618 aa16.51■□□□□ 0.23
RER1-203ENST00000378513 CNKSR1Q969H4 720 aa16.51■□□□□ 0.23
RER1-203ENST00000378513 RIT2Q99578 217 aa16.51■□□□□ 0.23
RER1-203ENST00000378513 PRMT1Q99873 361 aaKnown RBP16.51■□□□□ 0.23
RER1-203ENST00000378513 KLC4Q9NSK0 619 aa16.51■□□□□ 0.23
RER1-203ENST00000378513 ANAPC7Q9UJX3 599 aa16.51■□□□□ 0.23
RER1-203ENST00000378513 ADGRA3Q8IWK6 1321 aa16.51■□□□□ 0.23
RER1-203ENST00000378513 RGS16O15492 202 aaPredicted RBP16.51■□□□□ 0.23
RER1-203ENST00000378513 RTN2O75298 545 aa16.51■□□□□ 0.23
RER1-203ENST00000378513 ICAM1P05362 532 aa16.51■□□□□ 0.23
RER1-203ENST00000378513 BIRC3Q13489 604 aa16.51■□□□□ 0.23
RER1-203ENST00000378513 ANO5Q75V66 913 aa16.51■□□□□ 0.23
RER1-203ENST00000378513 SEC14L1Q92503 715 aa16.51■□□□□ 0.23
RER1-203ENST00000378513 PABPC3Q9H361 631 aaKnown RBP16.51■□□□□ 0.23
RER1-203ENST00000378513 TBK1Q9UHD2 729 aa16.51■□□□□ 0.23
RER1-203ENST00000378513 USTQ9Y2C2 406 aa16.51■□□□□ 0.23
RER1-203ENST00000378513 CHKAP35790 457 aa16.51■□□□□ 0.23
RER1-203ENST00000378513 TMEM206Q9H813 350 aa16.51■□□□□ 0.23
RER1-203ENST00000378513 ASIC3Q9UHC3 531 aa16.51■□□□□ 0.23
RER1-203ENST00000378513 FEM1BQ9UK73 627 aa16.51■□□□□ 0.23
RER1-203ENST00000378513 HNRNPDLO14979 420 aaKnown RBP16.5■□□□□ 0.23
RER1-203ENST00000378513 VIMP08670 466 aaKnown RBP16.5■□□□□ 0.23
RER1-203ENST00000378513 ANXA13P27216 316 aa16.5■□□□□ 0.23
RER1-203ENST00000378513 ACOT2P49753 483 aa16.5■□□□□ 0.23
RER1-203ENST00000378513 MTMR2Q13614 643 aa16.5■□□□□ 0.23
RER1-203ENST00000378513 SLC39A4Q6P5W5 647 aa16.5■□□□□ 0.23
RER1-203ENST00000378513 SV2AQ7L0J3 742 aa16.5■□□□□ 0.23
RER1-203ENST00000378513 SLC13A5Q86YT5 568 aaPredicted RBP16.5■□□□□ 0.23
RER1-203ENST00000378513 ZKSCAN4Q969J2 545 aaPredicted RBP16.5■□□□□ 0.23
RER1-203ENST00000378513 CEP170P1Q96L14 293 aa16.5■□□□□ 0.23
RER1-203ENST00000378513 SLC40A1Q9NP59 571 aa16.5■□□□□ 0.23
RER1-203ENST00000378513 GABBR1Q9UBS5 961 aa16.5■□□□□ 0.23
RER1-203ENST00000378513 CTDP1Q9Y5B0 961 aaPredicted RBP16.5■□□□□ 0.23
RER1-203ENST00000378513 SWT1Q5T5J6 900 aaKnown RBP16.5■□□□□ 0.23
RER1-203ENST00000378513 STYK1Q6J9G0 422 aa16.5■□□□□ 0.23
RER1-203ENST00000378513 RNF207Q6ZRF8 634 aa16.5■□□□□ 0.23
RER1-203ENST00000378513 SLC9A9Q8IVB4 645 aa16.5■□□□□ 0.23
RER1-203ENST00000378513 FAM71AQ8IYT1 594 aa16.5■□□□□ 0.23
RER1-203ENST00000378513 ANKRD42Q8N9B4 389 aa16.5■□□□□ 0.23
RER1-203ENST00000378513 PARD3BQ8TEW8 1205 aa16.5■□□□□ 0.23
RER1-203ENST00000378513 TXLNGYQ9BZA5 131 aa16.5■□□□□ 0.23
RER1-203ENST00000378513 KMT5AQ9NQR1 393 aa16.5■□□□□ 0.23
RER1-203ENST00000378513 TBX20Q9UMR3 447 aa16.5■□□□□ 0.23
RER1-203ENST00000378513 R3HDM2Q9Y2K5 976 aaKnown RBP16.5■□□□□ 0.23
RER1-203ENST00000378513 COILP38432 576 aaPredicted RBP16.49■□□□□ 0.23
RER1-203ENST00000378513 PTGER2P43116 358 aa16.49■□□□□ 0.23
RER1-203ENST00000378513 HSD17B4P51659 736 aa16.49■□□□□ 0.23
RER1-203ENST00000378513 BAATQ14032 418 aaPredicted RBP16.49■□□□□ 0.23
RER1-203ENST00000378513 SPDYE2Q495Y8 402 aa16.49■□□□□ 0.23
RER1-203ENST00000378513 CCDC50Q8IVM0 306 aa16.49■□□□□ 0.23
RER1-203ENST00000378513 HELQQ8TDG4 1101 aa16.49■□□□□ 0.23
RER1-203ENST00000378513 MRRFQ96E11 262 aaKnown RBP16.49■□□□□ 0.23
RER1-203ENST00000378513 XPO6Q96QU8 1125 aaKnown RBP16.49■□□□□ 0.23
RER1-203ENST00000378513 NAP1L3Q99457 506 aaPredicted RBP16.49■□□□□ 0.23
RER1-203ENST00000378513 ELAC2Q9BQ52 826 aaKnown RBP16.49■□□□□ 0.23
RER1-203ENST00000378513 CENPFP49454 3210 aa16.49■□□□□ 0.23
RER1-203ENST00000378513 SYNGAP1Q96PV0 1343 aa16.49■□□□□ 0.23
RER1-203ENST00000378513 WNT10BO00744 389 aa16.49■□□□□ 0.23
RER1-203ENST00000378513 NPM3O75607 178 aaKnown RBP16.49■□□□□ 0.23
RER1-203ENST00000378513 RRM1P23921 792 aa16.49■□□□□ 0.23
RER1-203ENST00000378513 PDE6CP51160 858 aa16.49■□□□□ 0.23
RER1-203ENST00000378513 MTM1Q13496 603 aa16.49■□□□□ 0.23
RER1-203ENST00000378513 PGM5Q15124 567 aa16.49■□□□□ 0.23
RER1-203ENST00000378513 NFIL3Q16649 462 aa16.49■□□□□ 0.23
RER1-203ENST00000378513 ZFYVE27Q5T4F4 411 aa16.49■□□□□ 0.23
RER1-203ENST00000378513 ARHGEF16Q5VV41 709 aa16.49■□□□□ 0.23
RER1-203ENST00000378513 CAPN12Q6ZSI9 719 aa16.49■□□□□ 0.23
RER1-203ENST00000378513 LRRC34Q8IZ02 419 aa16.49■□□□□ 0.23
RER1-203ENST00000378513 CACNA2D3Q8IZS8 1091 aa16.49■□□□□ 0.23
RER1-203ENST00000378513 TMEM161BQ8NDZ6 487 aa16.49■□□□□ 0.23
RER1-203ENST00000378513 ACSF2Q96CM8 615 aaPredicted RBP16.49■□□□□ 0.23
RER1-203ENST00000378513 ADAM7Q9H2U9 754 aa16.49■□□□□ 0.23
RER1-203ENST00000378513 SLC24A3Q9HC58 644 aa16.49■□□□□ 0.23
RER1-203ENST00000378513 RASAL2Q9UJF2 1139 aa16.49■□□□□ 0.23
RER1-203ENST00000378513 TTC7AQ9ULT0 858 aaPredicted RBP16.49■□□□□ 0.23
RER1-203ENST00000378513 ZNF862O60290 1169 aa16.48■□□□□ 0.23
RER1-203ENST00000378513 SWSAP1Q6NVH7 229 aa16.48■□□□□ 0.23
RER1-203ENST00000378513 FAM160B2Q86V87 743 aa16.48■□□□□ 0.23
RER1-203ENST00000378513 ATG4CQ96DT6 458 aa16.48■□□□□ 0.23
RER1-203ENST00000378513 PFASO15067 1338 aa16.48■□□□□ 0.23
RER1-203ENST00000378513 KRT17Q04695 432 aa16.48■□□□□ 0.23
RER1-203ENST00000378513 SGO2Q562F6 1265 aa16.48■□□□□ 0.23
RER1-203ENST00000378513 AGBL2Q5U5Z8 902 aa16.48■□□□□ 0.23
RER1-203ENST00000378513 KRT39Q6A163 491 aa16.48■□□□□ 0.23
RER1-203ENST00000378513 TAB3Q8N5C8 712 aaPredicted RBP16.48■□□□□ 0.23
RER1-203ENST00000378513 ZBTB45Q96K62 511 aaPredicted RBP16.48■□□□□ 0.23
RER1-203ENST00000378513 RAB20Q9NX57 234 aa16.48■□□□□ 0.23
RER1-203ENST00000378513 DRD4P21917 467 aa16.48■□□□□ 0.23
RER1-203ENST00000378513 PSMC4P43686 418 aa16.48■□□□□ 0.23
RER1-203ENST00000378513 MFAP3P55082 362 aa16.48■□□□□ 0.23
RER1-203ENST00000378513 FKBP1AP62942 108 aaKnown RBP16.48■□□□□ 0.23
RER1-203ENST00000378513 GTF2BQ00403 316 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms