RNA–Protein interactions for RNA: ENST00000377625.6

TBC1D4-201, Transcript of TBC1 domain family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TBC1D4, Length 6,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-201ENST00000377625 ATXN7L3BQ96GX2 97 aa20.09■□□□□ 0.81
TBC1D4-201ENST00000377625 RGL1Q9NZL6 768 aa20.09■□□□□ 0.81
TBC1D4-201ENST00000377625 CFAP69A5D8W1 941 aa20.08■□□□□ 0.81
TBC1D4-201ENST00000377625 PIK3R2O00459 728 aa20.08■□□□□ 0.81
TBC1D4-201ENST00000377625 PDXKO00764 312 aa20.08■□□□□ 0.81
TBC1D4-201ENST00000377625 KRT17Q04695 432 aa20.08■□□□□ 0.81
TBC1D4-201ENST00000377625 DHX40Q8IX18 779 aaKnown RBP20.08■□□□□ 0.81
TBC1D4-201ENST00000377625 OR6J1Q8NGC5 347 aa20.08■□□□□ 0.81
TBC1D4-201ENST00000377625 SH3TC2Q8TF17 1288 aa20.08■□□□□ 0.81
TBC1D4-201ENST00000377625 FAM161BQ96MY7 647 aa20.08■□□□□ 0.81
TBC1D4-201ENST00000377625 DACH2Q96NX9 599 aa20.08■□□□□ 0.81
TBC1D4-201ENST00000377625 NPHP3-ACAD11A0A0J9YXS1 232 aa20.08■□□□□ 0.81
TBC1D4-201ENST00000377625 ZNF197O14709 1029 aa20.08■□□□□ 0.81
TBC1D4-201ENST00000377625 EIF3EP60228 445 aaKnown RBP20.08■□□□□ 0.81
TBC1D4-201ENST00000377625 MTMR2Q13614 643 aa20.08■□□□□ 0.81
TBC1D4-201ENST00000377625 ANKRD40Q6AI12 368 aa20.08■□□□□ 0.81
TBC1D4-201ENST00000377625 EPAS1Q99814 870 aa20.08■□□□□ 0.81
TBC1D4-201ENST00000377625 PNPLA7Q6ZV29 1317 aa20.08■□□□□ 0.81
TBC1D4-201ENST00000377625 ANKRD65E5RJM6 399 aa20.08■□□□□ 0.81
TBC1D4-201ENST00000377625 SCP2P22307 547 aa20.08■□□□□ 0.81
TBC1D4-201ENST00000377625 VCPP55072 806 aaKnown RBP20.08■□□□□ 0.81
TBC1D4-201ENST00000377625 ACTR2P61160 394 aa20.08■□□□□ 0.81
TBC1D4-201ENST00000377625 CYP4F11Q9HBI6 524 aa20.08■□□□□ 0.81
TBC1D4-201ENST00000377625 HNRNPH2P55795 449 aaKnown RBP20.08■□□□□ 0.8
TBC1D4-201ENST00000377625 DHX34Q14147 1143 aaKnown RBP20.08■□□□□ 0.8
TBC1D4-201ENST00000377625 CCDC144BQ3MJ40 725 aa20.08■□□□□ 0.8
TBC1D4-201ENST00000377625 SPATA2LQ8IUW3 424 aaPredicted RBP20.08■□□□□ 0.8
TBC1D4-201ENST00000377625 RTN2O75298 545 aa20.08■□□□□ 0.8
TBC1D4-201ENST00000377625 TPI1P60174 286 aa20.08■□□□□ 0.8
TBC1D4-201ENST00000377625 MAGI3Q5TCQ9 1506 aa20.08■□□□□ 0.8
TBC1D4-201ENST00000377625 OVOS2A0A0G2JMS6 1433 aa20.07■□□□□ 0.8
TBC1D4-201ENST00000377625 OVOS2A0A0J9YW53 1432 aa20.07■□□□□ 0.8
TBC1D4-201ENST00000377625 OVOS2Q6IE36 1432 aa20.07■□□□□ 0.8
TBC1D4-201ENST00000377625 FLOT2Q14254 428 aa20.07■□□□□ 0.8
TBC1D4-201ENST00000377625 KDELC2Q7Z4H8 507 aa20.07■□□□□ 0.8
TBC1D4-201ENST00000377625 SRBD1Q8N5C6 995 aaKnown RBP20.07■□□□□ 0.8
TBC1D4-201ENST00000377625 SULT1E1P49888 294 aa20.07■□□□□ 0.8
TBC1D4-201ENST00000377625 ACBD5Q5T8D3 534 aaPredicted RBP20.07■□□□□ 0.8
TBC1D4-201ENST00000377625 C12orf60Q5U649 245 aa20.07■□□□□ 0.8
TBC1D4-201ENST00000377625 KIF1BO60333 1816 aa20.07■□□□□ 0.8
TBC1D4-201ENST00000377625 PRPF4O43172 522 aaKnown RBP eCLIP20.07■□□□□ 0.86e-7■□□□□ 10.2
TBC1D4-201ENST00000377625 AP2B1P63010 937 aa20.07■□□□□ 0.8
TBC1D4-201ENST00000377625 ZFATQ9P243 1243 aa20.07■□□□□ 0.8
TBC1D4-201ENST00000377625 SAMD9LQ8IVG5 1584 aa20.07■□□□□ 0.8
TBC1D4-201ENST00000377625 E2F4Q16254 413 aa20.07■□□□□ 0.8
TBC1D4-201ENST00000377625 CEP70Q8NHQ1 597 aa20.07■□□□□ 0.8
TBC1D4-201ENST00000377625 AGR3Q8TD06 166 aa20.07■□□□□ 0.8
TBC1D4-201ENST00000377625 PGBD4Q96DM1 585 aa20.07■□□□□ 0.8
TBC1D4-201ENST00000377625 RNPC3Q96LT9 517 aaKnown RBP20.07■□□□□ 0.8
TBC1D4-201ENST00000377625 DDX50Q9BQ39 737 aaKnown RBP20.07■□□□□ 0.8
TBC1D4-201ENST00000377625 TNPO2O14787 897 aaKnown RBP20.07■□□□□ 0.8
TBC1D4-201ENST00000377625 ATP1A1P05023 1023 aaKnown RBP20.07■□□□□ 0.8
TBC1D4-201ENST00000377625 FOXO4P98177 505 aa20.07■□□□□ 0.8
TBC1D4-201ENST00000377625 PDIA5Q14554 519 aa20.07■□□□□ 0.8
TBC1D4-201ENST00000377625 KCNB1Q14721 858 aa20.07■□□□□ 0.8
TBC1D4-201ENST00000377625 HIF1AQ16665 826 aa20.07■□□□□ 0.8
TBC1D4-201ENST00000377625 MARCH10Q8NA82 808 aaPredicted RBP20.07■□□□□ 0.8
TBC1D4-201ENST00000377625 ASAP3Q8TDY4 903 aa20.07■□□□□ 0.8
TBC1D4-201ENST00000377625 FBXL5Q9UKA1 691 aa20.07■□□□□ 0.8
TBC1D4-201ENST00000377625 PCDHGB4Q9UN71 923 aa20.07■□□□□ 0.8
TBC1D4-201ENST00000377625 GTPBP10A4D1E9 387 aaKnown RBP20.06■□□□□ 0.8
TBC1D4-201ENST00000377625 SLC1A1P43005 524 aa20.06■□□□□ 0.8
TBC1D4-201ENST00000377625 ATP6V1G3Q96LB4 118 aa20.06■□□□□ 0.8
TBC1D4-201ENST00000377625 AGAP1Q9UPQ3 857 aa20.06■□□□□ 0.8
TBC1D4-201ENST00000377625 KIAA0391O15091 583 aaKnown RBP20.06■□□□□ 0.8
TBC1D4-201ENST00000377625 NFIXQ14938 502 aa20.06■□□□□ 0.8
TBC1D4-201ENST00000377625 ELP3Q9H9T3 547 aa20.06■□□□□ 0.8
TBC1D4-201ENST00000377625 EML4Q9HC35 981 aaKnown RBP20.06■□□□□ 0.8
TBC1D4-201ENST00000377625 HSPBP1Q9NZL4 362 aa20.06■□□□□ 0.8
TBC1D4-201ENST00000377625 SLC4A7Q9Y6M7 1214 aa20.06■□□□□ 0.8
TBC1D4-201ENST00000377625 ZNF189O75820 626 aaPredicted RBP20.06■□□□□ 0.8
TBC1D4-201ENST00000377625 GUCY1A2P33402 732 aa20.06■□□□□ 0.8
TBC1D4-201ENST00000377625 NBPF9Q3BBW0 867 aa20.06■□□□□ 0.8
TBC1D4-201ENST00000377625 PPHLN1Q8NEY8 458 aaKnown RBP20.06■□□□□ 0.8
TBC1D4-201ENST00000377625 NDE1Q9NXR1 346 aa20.06■□□□□ 0.8
TBC1D4-201ENST00000377625 TRAPPC3O43617 180 aa20.06■□□□□ 0.8
TBC1D4-201ENST00000377625 NLRP14Q86W24 1093 aa20.06■□□□□ 0.8
TBC1D4-201ENST00000377625 TAGAPQ8N103 731 aa20.06■□□□□ 0.8
TBC1D4-201ENST00000377625 C18orf8Q96DM3 657 aa20.06■□□□□ 0.8
TBC1D4-201ENST00000377625 SLC16A3O15427 465 aaKnown RBP20.05■□□□□ 0.8
TBC1D4-201ENST00000377625 KCNN4O15554 427 aa20.05■□□□□ 0.8
TBC1D4-201ENST00000377625 OR9Q1Q8NGQ5 310 aa20.05■□□□□ 0.8
TBC1D4-201ENST00000377625 TIPINQ9BVW5 301 aa20.05■□□□□ 0.8
TBC1D4-201ENST00000377625 KLHL11Q9NVR0 708 aa20.05■□□□□ 0.8
TBC1D4-201ENST00000377625 SESN2P58004 480 aaPredicted RBP20.05■□□□□ 0.8
TBC1D4-201ENST00000377625 SCARF1Q14162 830 aa20.05■□□□□ 0.8
TBC1D4-201ENST00000377625 TADA2BQ86TJ2 420 aa20.05■□□□□ 0.8
TBC1D4-201ENST00000377625 ANKMY2Q8IV38 441 aa20.05■□□□□ 0.8
TBC1D4-201ENST00000377625 YAF2Q8IY57 180 aa20.05■□□□□ 0.8
TBC1D4-201ENST00000377625 APPL2Q8NEU8 664 aa20.05■□□□□ 0.8
TBC1D4-201ENST00000377625 DCUN1D1Q96GG9 259 aa20.05■□□□□ 0.8
TBC1D4-201ENST00000377625 LIMA1Q9UHB6 759 aaKnown RBP20.05■□□□□ 0.8
TBC1D4-201ENST00000377625 AMACRQ9UHK6 382 aa20.05■□□□□ 0.8
TBC1D4-201ENST00000377625 ZSCAN9O15535 394 aaPredicted RBP20.05■□□□□ 0.8
TBC1D4-201ENST00000377625 SYF2O95926 243 aaKnown RBP20.05■□□□□ 0.8
TBC1D4-201ENST00000377625 ECT2Q9H8V3 914 aa20.05■□□□□ 0.8
TBC1D4-201ENST00000377625 ETNK1Q9HBU6 452 aa20.05■□□□□ 0.8
TBC1D4-201ENST00000377625 CCDC22O60826 627 aa20.05■□□□□ 0.8
TBC1D4-201ENST00000377625 COG2Q14746 738 aa20.05■□□□□ 0.8
TBC1D4-201ENST00000377625 RRM2BQ7LG56 351 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms