RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 BFSP1Q12934 665 aa14.08□□□□□ -0.15
CBWD3-203ENST00000377344 MAN2A1Q16706 1144 aa14.08□□□□□ -0.15
CBWD3-203ENST00000377344 DEFB128Q7Z7B8 93 aa14.08□□□□□ -0.15
CBWD3-203ENST00000377344 TRIM59Q8IWR1 403 aa14.08□□□□□ -0.15
CBWD3-203ENST00000377344 TMEM192Q8IY95 271 aa14.08□□□□□ -0.15
CBWD3-203ENST00000377344 ANP32BQ92688 251 aaKnown RBP14.08□□□□□ -0.15
CBWD3-203ENST00000377344 MMRN2Q9H8L6 949 aa14.08□□□□□ -0.15
CBWD3-203ENST00000377344 HES2Q9Y543 173 aa14.08□□□□□ -0.15
CBWD3-203ENST00000377344 TRIM43BA6NCK2 446 aa14.08□□□□□ -0.16
CBWD3-203ENST00000377344 MAPK13O15264 365 aa14.08□□□□□ -0.16
CBWD3-203ENST00000377344 TRIM49P0CI25 452 aa14.08□□□□□ -0.16
CBWD3-203ENST00000377344 TRIM49CP0CI26 452 aa14.08□□□□□ -0.16
CBWD3-203ENST00000377344 DLATP10515 647 aaKnown RBP14.08□□□□□ -0.16
CBWD3-203ENST00000377344 RAG1P15918 1043 aa14.08□□□□□ -0.16
CBWD3-203ENST00000377344 VAMP7P51809 220 aa14.08□□□□□ -0.16
CBWD3-203ENST00000377344 UBXN11Q5T124 520 aa14.08□□□□□ -0.16
CBWD3-203ENST00000377344 SARM1Q6SZW1 724 aa14.08□□□□□ -0.16
CBWD3-203ENST00000377344 TRIM43Q96BQ3 446 aaPredicted RBP14.08□□□□□ -0.16
CBWD3-203ENST00000377344 BORCS6Q96GS4 357 aa14.08□□□□□ -0.16
CBWD3-203ENST00000377344 NAP1L5Q96NT1 182 aaPredicted RBP14.08□□□□□ -0.16
CBWD3-203ENST00000377344 FNBP1Q96RU3 617 aa14.08□□□□□ -0.16
CBWD3-203ENST00000377344 ADAM2Q99965 735 aa14.08□□□□□ -0.16
CBWD3-203ENST00000377344 CCDC94Q9BW85 323 aaPredicted RBP14.08□□□□□ -0.16
CBWD3-203ENST00000377344 XPO4Q9C0E2 1151 aaKnown RBP14.08□□□□□ -0.16
CBWD3-203ENST00000377344 TMX1Q9H3N1 280 aa14.08□□□□□ -0.16
CBWD3-203ENST00000377344 NXF3Q9H4D5 531 aaKnown RBP14.08□□□□□ -0.16
CBWD3-203ENST00000377344 RPF1Q9H9Y2 349 aaKnown RBP14.08□□□□□ -0.16
CBWD3-203ENST00000377344 PRKAG2Q9UGJ0 569 aa14.08□□□□□ -0.16
CBWD3-203ENST00000377344 CPSF3Q9UKF6 684 aaKnown RBP14.08□□□□□ -0.16
CBWD3-203ENST00000377344 LRRC10BA6NIK2 292 aa14.07□□□□□ -0.16
CBWD3-203ENST00000377344 CBFA2T2O43439 604 aa14.07□□□□□ -0.16
CBWD3-203ENST00000377344 MGEA5O60502 916 aa14.07□□□□□ -0.16
CBWD3-203ENST00000377344 PARNO95453 639 aaKnown RBP14.07□□□□□ -0.16
CBWD3-203ENST00000377344 TPM3P06753 285 aa14.07□□□□□ -0.16
CBWD3-203ENST00000377344 CLTAP09496 248 aa14.07□□□□□ -0.16
CBWD3-203ENST00000377344 CXCL8P10145 99 aa14.07□□□□□ -0.16
CBWD3-203ENST00000377344 DLG4P78352 724 aa14.07□□□□□ -0.16
CBWD3-203ENST00000377344 KYAT1Q16773 422 aa14.07□□□□□ -0.16
CBWD3-203ENST00000377344 VWA3BQ502W6 1294 aa14.07□□□□□ -0.16
CBWD3-203ENST00000377344 APTXQ7Z2E3 356 aaKnown RBP14.07□□□□□ -0.16
CBWD3-203ENST00000377344 USP37Q86T82 979 aa14.07□□□□□ -0.16
CBWD3-203ENST00000377344 DBF4BQ8NFT6 615 aa14.07□□□□□ -0.16
CBWD3-203ENST00000377344 SEPT8Q92599 483 aa14.07□□□□□ -0.16
CBWD3-203ENST00000377344 MFSD14AQ96MC6 490 aa14.07□□□□□ -0.16
CBWD3-203ENST00000377344 ACAP3Q96P50 834 aa14.07□□□□□ -0.16
CBWD3-203ENST00000377344 NDST4Q9H3R1 872 aa14.07□□□□□ -0.16
CBWD3-203ENST00000377344 PDE11AQ9HCR9 933 aa14.07□□□□□ -0.16
CBWD3-203ENST00000377344 FAM105AQ9NUU6 356 aa14.07□□□□□ -0.16
CBWD3-203ENST00000377344 SNTG2Q9NY99 539 aa14.07□□□□□ -0.16
CBWD3-203ENST00000377344 IPPQ9Y573 584 aa14.07□□□□□ -0.16
CBWD3-203ENST00000377344 PCDHB2Q9Y5E7 798 aa14.07□□□□□ -0.16
CBWD3-203ENST00000377344 TANC1Q9C0D5 1861 aa14.07□□□□□ -0.16
CBWD3-203ENST00000377344 ADCY5O95622 1261 aa14.06□□□□□ -0.16
CBWD3-203ENST00000377344 TIMP1P01033 207 aa14.06□□□□□ -0.16
CBWD3-203ENST00000377344 GRM5P41594 1212 aa14.06□□□□□ -0.16
CBWD3-203ENST00000377344 YARSP54577 528 aaKnown RBP14.06□□□□□ -0.16
CBWD3-203ENST00000377344 UBXN1Q04323 297 aa14.06□□□□□ -0.16
CBWD3-203ENST00000377344 KCNH2Q12809 1159 aa14.06□□□□□ -0.16
CBWD3-203ENST00000377344 GPNMBQ14956 572 aa14.06□□□□□ -0.16
CBWD3-203ENST00000377344 ENOX2Q16206 610 aaKnown RBP14.06□□□□□ -0.16
CBWD3-203ENST00000377344 MIIPQ5JXC2 388 aa14.06□□□□□ -0.16
CBWD3-203ENST00000377344 BRSK2Q8IWQ3 736 aa14.06□□□□□ -0.16
CBWD3-203ENST00000377344 C7orf61Q8IZ16 206 aa14.06□□□□□ -0.16
CBWD3-203ENST00000377344 PLEKHO2Q8TD55 490 aa14.06□□□□□ -0.16
CBWD3-203ENST00000377344 SLC35C1Q96A29 364 aa14.06□□□□□ -0.16
CBWD3-203ENST00000377344 POP1Q99575 1024 aaKnown RBP14.06□□□□□ -0.16
CBWD3-203ENST00000377344 PARP2Q9UGN5 583 aa14.06□□□□□ -0.16
CBWD3-203ENST00000377344 A0A1B0GTH6 734 aa14.06□□□□□ -0.16
CBWD3-203ENST00000377344 KIAA0355O15063 1070 aa14.06□□□□□ -0.16
CBWD3-203ENST00000377344 AFPP02771 609 aaKnown RBP14.06□□□□□ -0.16
CBWD3-203ENST00000377344 TNNI1P19237 187 aa14.06□□□□□ -0.16
CBWD3-203ENST00000377344 AKAP5P24588 427 aa14.06□□□□□ -0.16
CBWD3-203ENST00000377344 ITGB8P26012 769 aa14.06□□□□□ -0.16
CBWD3-203ENST00000377344 PPP2R3AQ06190 1150 aa14.06□□□□□ -0.16
CBWD3-203ENST00000377344 PSMD6Q15008 389 aa14.06□□□□□ -0.16
CBWD3-203ENST00000377344 PTPN21Q16825 1174 aa14.06□□□□□ -0.16
CBWD3-203ENST00000377344 PLEKHG4Q58EX7 1191 aa14.06□□□□□ -0.16
CBWD3-203ENST00000377344 FKBP15Q5T1M5 1219 aa14.06□□□□□ -0.16
CBWD3-203ENST00000377344 LMBRD2Q68DH5 695 aaPredicted RBP14.06□□□□□ -0.16
CBWD3-203ENST00000377344 TNS4Q8IZW8 715 aa14.06□□□□□ -0.16
CBWD3-203ENST00000377344 RNF169Q8NCN4 708 aa14.06□□□□□ -0.16
CBWD3-203ENST00000377344 PARD3BQ8TEW8 1205 aa14.06□□□□□ -0.16
CBWD3-203ENST00000377344 HTATIP2Q9BUP3 242 aa14.06□□□□□ -0.16
CBWD3-203ENST00000377344 FTHL17Q9BXU8 183 aa14.06□□□□□ -0.16
CBWD3-203ENST00000377344 RTN4Q9NQC3 1192 aaKnown RBP14.06□□□□□ -0.16
CBWD3-203ENST00000377344 PCDH10Q9P2E7 1040 aa14.06□□□□□ -0.16
CBWD3-203ENST00000377344 SCN5AQ14524 2016 aa14.05□□□□□ -0.16
CBWD3-203ENST00000377344 LRRIQ3A6PVS8 624 aaPredicted RBP14.05□□□□□ -0.16
CBWD3-203ENST00000377344 LGALS16A8MUM7 142 aa14.05□□□□□ -0.16
CBWD3-203ENST00000377344 TEX33O43247 280 aa14.05□□□□□ -0.16
CBWD3-203ENST00000377344 RAB27AP51159 221 aa14.05□□□□□ -0.16
CBWD3-203ENST00000377344 ZNF75DP51815 510 aa14.05□□□□□ -0.16
CBWD3-203ENST00000377344 WNT7BP56706 349 aa14.05□□□□□ -0.16
CBWD3-203ENST00000377344 DSC3Q14574 896 aa14.05□□□□□ -0.16
CBWD3-203ENST00000377344 HACE1Q8IYU2 909 aa14.05□□□□□ -0.16
CBWD3-203ENST00000377344 TMEM199Q8N511 208 aa14.05□□□□□ -0.16
CBWD3-203ENST00000377344 SMG8Q8ND04 991 aaKnown RBP14.05□□□□□ -0.16
CBWD3-203ENST00000377344 TMC2Q8TDI7 906 aa14.05□□□□□ -0.16
CBWD3-203ENST00000377344 APBB2Q92870 758 aa14.05□□□□□ -0.16
CBWD3-203ENST00000377344 RNF39Q9H2S5 420 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms