RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 ERICH1Q86X53 443 aa11.91□□□□□ -0.5
HDAC6-203ENST00000376619 TPCN2Q8NHX9 752 aa11.91□□□□□ -0.5
HDAC6-203ENST00000376619 KRT35Q92764 455 aa11.91□□□□□ -0.5
HDAC6-203ENST00000376619 EXOC4Q96A65 974 aa11.91□□□□□ -0.5
HDAC6-203ENST00000376619 PBKQ96KB5 322 aa11.91□□□□□ -0.5
HDAC6-203ENST00000376619 ANAPC5Q9UJX4 755 aa11.91□□□□□ -0.5
HDAC6-203ENST00000376619 VWA5AO00534 786 aa11.9□□□□□ -0.5
HDAC6-203ENST00000376619 IREB2P48200 963 aaKnown RBP11.9□□□□□ -0.5
HDAC6-203ENST00000376619 FAM133BQ5BKY9 247 aaKnown RBP11.9□□□□□ -0.5
HDAC6-203ENST00000376619 RFX6Q8HWS3 928 aa11.9□□□□□ -0.5
HDAC6-203ENST00000376619 CCDC13Q8IYE1 715 aa11.9□□□□□ -0.5
HDAC6-203ENST00000376619 GPD1LQ8N335 351 aa11.9□□□□□ -0.5
HDAC6-203ENST00000376619 CYFIP2Q96F07 1278 aa11.9□□□□□ -0.5
HDAC6-203ENST00000376619 INTS9Q9NV88 658 aaKnown RBP11.9□□□□□ -0.5
HDAC6-203ENST00000376619 BAIAP2L1Q9UHR4 511 aa11.9□□□□□ -0.5
HDAC6-203ENST00000376619 F8VZ95 297 aa11.9□□□□□ -0.5
HDAC6-203ENST00000376619 GOLGA8RI6L899 631 aa11.9□□□□□ -0.5
HDAC6-203ENST00000376619 TCF7P36402 384 aaPredicted RBP11.9□□□□□ -0.5
HDAC6-203ENST00000376619 ZNF699Q32M78 642 aa11.9□□□□□ -0.5
HDAC6-203ENST00000376619 MAP1SQ66K74 1059 aaPredicted RBP11.9□□□□□ -0.5
HDAC6-203ENST00000376619 C1orf186Q6ZWK4 172 aa11.9□□□□□ -0.5
HDAC6-203ENST00000376619 CCDC60Q8IWA6 550 aaPredicted RBP11.9□□□□□ -0.5
HDAC6-203ENST00000376619 SRRM1Q8IYB3 904 aaKnown RBP11.9□□□□□ -0.5
HDAC6-203ENST00000376619 GMCL1P1Q8NEA9 526 aa11.9□□□□□ -0.5
HDAC6-203ENST00000376619 OR6B3Q8NGW1 331 aa11.9□□□□□ -0.5
HDAC6-203ENST00000376619 RBM46Q8TBY0 533 aaKnown RBP11.9□□□□□ -0.5
HDAC6-203ENST00000376619 LRRN4Q8WUT4 740 aa11.9□□□□□ -0.5
HDAC6-203ENST00000376619 LPAR1Q92633 364 aa11.9□□□□□ -0.5
HDAC6-203ENST00000376619 CDHR1Q96JP9 859 aa11.9□□□□□ -0.5
HDAC6-203ENST00000376619 CLMNQ96JQ2 1002 aa11.9□□□□□ -0.5
HDAC6-203ENST00000376619 RIT2Q99578 217 aa11.9□□□□□ -0.5
HDAC6-203ENST00000376619 ADPGKQ9BRR6 497 aa11.9□□□□□ -0.5
HDAC6-203ENST00000376619 A1CFQ9NQ94 594 aaKnown RBP11.9□□□□□ -0.5
HDAC6-203ENST00000376619 FAM49BQ9NUQ9 324 aa11.9□□□□□ -0.5
HDAC6-203ENST00000376619 KNL1Q8NG31 2342 aa11.9□□□□□ -0.5
HDAC6-203ENST00000376619 ASTN1O14525 1302 aa11.9□□□□□ -0.5
HDAC6-203ENST00000376619 M0R2N6 131 aa11.9□□□□□ -0.5
HDAC6-203ENST00000376619 RNF8O76064 485 aa11.9□□□□□ -0.5
HDAC6-203ENST00000376619 PDGFRBP09619 1106 aa11.9□□□□□ -0.5
HDAC6-203ENST00000376619 BRD2P25440 801 aaKnown RBP11.9□□□□□ -0.5
HDAC6-203ENST00000376619 PSMC4P43686 418 aa11.9□□□□□ -0.5
HDAC6-203ENST00000376619 KRT81Q14533 505 aa11.9□□□□□ -0.5
HDAC6-203ENST00000376619 TTC31Q49AM3 519 aaPredicted RBP11.9□□□□□ -0.5
HDAC6-203ENST00000376619 CPNE8Q86YQ8 564 aa11.9□□□□□ -0.5
HDAC6-203ENST00000376619 USP38Q8NB14 1042 aa11.9□□□□□ -0.5
HDAC6-203ENST00000376619 TSEN2Q8NCE0 465 aaKnown RBP11.9□□□□□ -0.5
HDAC6-203ENST00000376619 PRPF31Q8WWY3 499 aaKnown RBP11.9□□□□□ -0.5
HDAC6-203ENST00000376619 TAF1DQ9H5J8 278 aaPredicted RBP11.9□□□□□ -0.5
HDAC6-203ENST00000376619 RRAGCQ9HB90 399 aa11.9□□□□□ -0.5
HDAC6-203ENST00000376619 SEL1LQ9UBV2 794 aa11.9□□□□□ -0.5
HDAC6-203ENST00000376619 PASKQ96RG2 1323 aa11.9□□□□□ -0.51
HDAC6-203ENST00000376619 PSMD10O75832 226 aa11.89□□□□□ -0.51
HDAC6-203ENST00000376619 SNHG28P0DPA3 235 aa11.89□□□□□ -0.51
HDAC6-203ENST00000376619 RRM1P23921 792 aa11.89□□□□□ -0.51
HDAC6-203ENST00000376619 NME8Q8N427 588 aa11.89□□□□□ -0.51
HDAC6-203ENST00000376619 UBA3Q8TBC4 463 aa11.89□□□□□ -0.51
HDAC6-203ENST00000376619 MTMR12Q9C0I1 747 aa11.89□□□□□ -0.51
HDAC6-203ENST00000376619 AGO4Q9HCK5 861 aaKnown RBP11.89□□□□□ -0.51
HDAC6-203ENST00000376619 PXMP2Q9NR77 195 aa11.89□□□□□ -0.51
HDAC6-203ENST00000376619 CCDC78A2IDD5 438 aa11.89□□□□□ -0.51
HDAC6-203ENST00000376619 CLTAP09496 248 aa11.89□□□□□ -0.51
HDAC6-203ENST00000376619 YWHAGP61981 247 aaKnown RBP eCLIP11.89□□□□□ -0.51
HDAC6-203ENST00000376619 NCOA4Q13772 614 aa11.89□□□□□ -0.51
HDAC6-203ENST00000376619 PPP2R5AQ15172 486 aa11.89□□□□□ -0.51
HDAC6-203ENST00000376619 LONRF1Q17RB8 773 aa11.89□□□□□ -0.51
HDAC6-203ENST00000376619 EMBQ6PCB8 327 aa11.89□□□□□ -0.51
HDAC6-203ENST00000376619 CATSPER4Q7RTX7 472 aa11.89□□□□□ -0.51
HDAC6-203ENST00000376619 PALM2Q8IXS6 379 aa11.89□□□□□ -0.51
HDAC6-203ENST00000376619 AGBL3Q8NEM8 1001 aa11.89□□□□□ -0.51
HDAC6-203ENST00000376619 HSD17B14Q9BPX1 270 aa11.89□□□□□ -0.51
HDAC6-203ENST00000376619 TRIM7Q9C029 511 aa11.89□□□□□ -0.51
HDAC6-203ENST00000376619 GOLGA8KD6RF30 607 aa11.89□□□□□ -0.51
HDAC6-203ENST00000376619 RAP1GAPP47736 663 aa11.89□□□□□ -0.51
HDAC6-203ENST00000376619 CDH8P55286 799 aa11.89□□□□□ -0.51
HDAC6-203ENST00000376619 ANKMY2Q8IV38 441 aa11.89□□□□□ -0.51
HDAC6-203ENST00000376619 MKL1Q969V6 931 aa11.89□□□□□ -0.51
HDAC6-203ENST00000376619 KLF6Q99612 283 aaPredicted RBP11.89□□□□□ -0.51
HDAC6-203ENST00000376619 ELAC2Q9BQ52 826 aaKnown RBP11.89□□□□□ -0.51
HDAC6-203ENST00000376619 RPF1Q9H9Y2 349 aaKnown RBP11.89□□□□□ -0.51
HDAC6-203ENST00000376619 KLK14Q9P0G3 267 aa11.89□□□□□ -0.51
HDAC6-203ENST00000376619 AJAP1Q9UKB5 411 aaPredicted RBP11.89□□□□□ -0.51
HDAC6-203ENST00000376619 TELO2Q9Y4R8 837 aa11.89□□□□□ -0.51
HDAC6-203ENST00000376619 MYH14Q7Z406 1995 aaKnown RBP11.89□□□□□ -0.51
HDAC6-203ENST00000376619 PHF20L1A8MW92 1017 aa11.89□□□□□ -0.51
HDAC6-203ENST00000376619 VTNP04004 478 aa11.89□□□□□ -0.51
HDAC6-203ENST00000376619 PSMA2P25787 234 aa11.89□□□□□ -0.51
HDAC6-203ENST00000376619 PAPD7Q5XG87 772 aaKnown RBP11.89□□□□□ -0.51
HDAC6-203ENST00000376619 TATDN1Q6P1N9 297 aa11.89□□□□□ -0.51
HDAC6-203ENST00000376619 C15orf52Q6ZUT6 534 aaKnown RBP11.89□□□□□ -0.51
HDAC6-203ENST00000376619 EMC1Q8N766 993 aa11.89□□□□□ -0.51
HDAC6-203ENST00000376619 NEK9Q8TD19 979 aa11.89□□□□□ -0.51
HDAC6-203ENST00000376619 MED10Q9BTT4 135 aa11.89□□□□□ -0.51
HDAC6-203ENST00000376619 KCTD10Q9H3F6 313 aa11.89□□□□□ -0.51
HDAC6-203ENST00000376619 CYP26B1Q9NR63 512 aa11.89□□□□□ -0.51
HDAC6-203ENST00000376619 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.89□□□□□ -0.51
HDAC6-203ENST00000376619 PNMA2Q9UL42 364 aa11.89□□□□□ -0.51
HDAC6-203ENST00000376619 ODF2LQ9ULJ1 636 aa11.89□□□□□ -0.51
HDAC6-203ENST00000376619 MYH10P35580 1976 aa11.88□□□□□ -0.51
HDAC6-203ENST00000376619 EIF4E1BA6NMX2 242 aaKnown RBP11.88□□□□□ -0.51
HDAC6-203ENST00000376619 MYO1CO00159 1063 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms