RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 NCALDP61601 193 aa15.15■□□□□ 0.02
CLCNKA-202ENST00000375692 SEL1L2Q5TEA6 688 aa15.15■□□□□ 0.02
CLCNKA-202ENST00000375692 C11orf63Q6NUN7 778 aa15.15■□□□□ 0.02
CLCNKA-202ENST00000375692 OTOP1Q7RTM1 612 aa15.15■□□□□ 0.02
CLCNKA-202ENST00000375692 SYCP3Q8IZU3 236 aa15.15■□□□□ 0.02
CLCNKA-202ENST00000375692 ANKRD42Q8N9B4 389 aa15.15■□□□□ 0.02
CLCNKA-202ENST00000375692 DCAF4Q8WV16 495 aa15.15■□□□□ 0.02
CLCNKA-202ENST00000375692 PRCCQ92733 491 aaPredicted RBP15.15■□□□□ 0.02
CLCNKA-202ENST00000375692 WDR18Q9BV38 432 aa15.15■□□□□ 0.02
CLCNKA-202ENST00000375692 TMEM109Q9BVC6 243 aa15.15■□□□□ 0.02
CLCNKA-202ENST00000375692 ECT2Q9H8V3 914 aa15.15■□□□□ 0.02
CLCNKA-202ENST00000375692 EMSYQ7Z589 1322 aa15.14■□□□□ 0.01
CLCNKA-202ENST00000375692 TMEM120BA0PK00 339 aa15.14■□□□□ 0.01
CLCNKA-202ENST00000375692 CIITAP33076 1130 aa15.14■□□□□ 0.01
CLCNKA-202ENST00000375692 GCLMP48507 274 aa15.14■□□□□ 0.01
CLCNKA-202ENST00000375692 PSEN1P49768 467 aa15.14■□□□□ 0.01
CLCNKA-202ENST00000375692 SNX1Q13596 522 aa15.14■□□□□ 0.01
CLCNKA-202ENST00000375692 SLMAPQ14BN4 828 aa15.14■□□□□ 0.01
CLCNKA-202ENST00000375692 SLC13A5Q86YT5 568 aaPredicted RBP15.14■□□□□ 0.01
CLCNKA-202ENST00000375692 MTMR14Q8NCE2 650 aa15.14■□□□□ 0.01
CLCNKA-202ENST00000375692 ZSWIM2Q8NEG5 633 aa15.14■□□□□ 0.01
CLCNKA-202ENST00000375692 AGAP11Q8TF27 550 aa15.14■□□□□ 0.01
CLCNKA-202ENST00000375692 NSMCE1Q8WV22 266 aa15.14■□□□□ 0.01
CLCNKA-202ENST00000375692 C1orf54Q8WWF1 131 aa15.14■□□□□ 0.01
CLCNKA-202ENST00000375692 CDC42EP4Q9H3Q1 356 aaKnown RBP15.14■□□□□ 0.01
CLCNKA-202ENST00000375692 PNMA3Q9UL41 463 aa15.14■□□□□ 0.01
CLCNKA-202ENST00000375692 SIPA1L1O43166 1804 aa15.14■□□□□ 0.01
CLCNKA-202ENST00000375692 IGLV3-22A0A075B6J6 115 aa15.14■□□□□ 0.01
CLCNKA-202ENST00000375692 A8MUI8 341 aa15.14■□□□□ 0.01
CLCNKA-202ENST00000375692 ANP32DO95626 131 aa15.14■□□□□ 0.01
CLCNKA-202ENST00000375692 NQO1P15559 274 aaKnown RBP15.14■□□□□ 0.01
CLCNKA-202ENST00000375692 PDE6CP51160 858 aa15.14■□□□□ 0.01
CLCNKA-202ENST00000375692 ALDH5A1P51649 535 aaPredicted RBP15.14■□□□□ 0.01
CLCNKA-202ENST00000375692 ZNF280AP59817 542 aaPredicted RBP15.14■□□□□ 0.01
CLCNKA-202ENST00000375692 PPP3CAQ08209 521 aa15.14■□□□□ 0.01
CLCNKA-202ENST00000375692 NAA25Q14CX7 972 aa15.14■□□□□ 0.01
CLCNKA-202ENST00000375692 SIX1Q15475 284 aaPredicted RBP15.14■□□□□ 0.01
CLCNKA-202ENST00000375692 PRAMEF18Q5VWM3 479 aa15.14■□□□□ 0.01
CLCNKA-202ENST00000375692 BTNL9Q6UXG8 535 aa15.14■□□□□ 0.01
CLCNKA-202ENST00000375692 NSMFQ6X4W1 530 aa15.14■□□□□ 0.01
CLCNKA-202ENST00000375692 GDAP1Q8TB36 358 aa15.14■□□□□ 0.01
CLCNKA-202ENST00000375692 FAM151AQ8WW52 585 aa15.14■□□□□ 0.01
CLCNKA-202ENST00000375692 ARHGEF2Q92974 986 aaKnown RBP15.14■□□□□ 0.01
CLCNKA-202ENST00000375692 NSRP1Q9H0G5 558 aaKnown RBP15.14■□□□□ 0.01
CLCNKA-202ENST00000375692 KCNK9Q9NPC2 374 aa15.14■□□□□ 0.01
CLCNKA-202ENST00000375692 AAASQ9NRG9 546 aa15.14■□□□□ 0.01
CLCNKA-202ENST00000375692 PARP2Q9UGN5 583 aa15.14■□□□□ 0.01
CLCNKA-202ENST00000375692 TRIM33Q9UPN9 1127 aa15.14■□□□□ 0.01
CLCNKA-202ENST00000375692 USP15Q9Y4E8 981 aaPredicted RBP15.14■□□□□ 0.01
CLCNKA-202ENST00000375692 IGF2BP3O00425 579 aaKnown RBP eCLIP15.13■□□□□ 0.01
CLCNKA-202ENST00000375692 TP73O15350 636 aa15.13■□□□□ 0.01
CLCNKA-202ENST00000375692 FOSP01100 380 aaPredicted RBP15.13■□□□□ 0.01
CLCNKA-202ENST00000375692 GH1P01241 217 aa15.13■□□□□ 0.01
CLCNKA-202ENST00000375692 DLATP10515 647 aaKnown RBP15.13■□□□□ 0.01
CLCNKA-202ENST00000375692 HSPA6P17066 643 aa15.13■□□□□ 0.01
CLCNKA-202ENST00000375692 PAX7P23759 505 aa15.13■□□□□ 0.01
CLCNKA-202ENST00000375692 CHKAP35790 457 aa15.13■□□□□ 0.01
CLCNKA-202ENST00000375692 HADHBP55084 474 aaKnown RBP15.13■□□□□ 0.01
CLCNKA-202ENST00000375692 MPP2Q14168 576 aa15.13■□□□□ 0.01
CLCNKA-202ENST00000375692 PPP2R5AQ15172 486 aa15.13■□□□□ 0.01
CLCNKA-202ENST00000375692 CLUL1Q15846 466 aa15.13■□□□□ 0.01
CLCNKA-202ENST00000375692 NFIL3Q16649 462 aa15.13■□□□□ 0.01
CLCNKA-202ENST00000375692 LRCH2Q5VUJ6 765 aa15.13■□□□□ 0.01
CLCNKA-202ENST00000375692 NUGGCQ68CJ6 796 aa15.13■□□□□ 0.01
CLCNKA-202ENST00000375692 TATDN1Q6P1N9 297 aa15.13■□□□□ 0.01
CLCNKA-202ENST00000375692 TAOK1Q7L7X3 1001 aa15.13■□□□□ 0.01
CLCNKA-202ENST00000375692 MKL1Q969V6 931 aa15.13■□□□□ 0.01
CLCNKA-202ENST00000375692 ATRNL1Q5VV63 1379 aa15.13■□□□□ 0.01
CLCNKA-202ENST00000375692 SPOPO43791 374 aa15.13■□□□□ 0.01
CLCNKA-202ENST00000375692 KIF1CO43896 1103 aaKnown RBP15.13■□□□□ 0.01
CLCNKA-202ENST00000375692 DDNO94850 711 aaPredicted RBP15.13■□□□□ 0.01
CLCNKA-202ENST00000375692 OAS1P00973 400 aaKnown RBP15.13■□□□□ 0.01
CLCNKA-202ENST00000375692 BCRP11274 1271 aa15.13■□□□□ 0.01
CLCNKA-202ENST00000375692 CHRNB2P17787 502 aa15.13■□□□□ 0.01
CLCNKA-202ENST00000375692 ADCY1Q08828 1119 aa15.13■□□□□ 0.01
CLCNKA-202ENST00000375692 RASA3Q14644 834 aa15.13■□□□□ 0.01
CLCNKA-202ENST00000375692 TRIP13Q15645 432 aaPredicted RBP15.13■□□□□ 0.01
CLCNKA-202ENST00000375692 ZKSCAN8Q15776 578 aaPredicted RBP15.13■□□□□ 0.01
CLCNKA-202ENST00000375692 VSTM1Q6UX27 236 aa15.13■□□□□ 0.01
CLCNKA-202ENST00000375692 SPICE1Q8N0Z3 855 aa15.13■□□□□ 0.01
CLCNKA-202ENST00000375692 CD101Q93033 1021 aa15.13■□□□□ 0.01
CLCNKA-202ENST00000375692 ELMO3Q96BJ8 720 aa15.13■□□□□ 0.01
CLCNKA-202ENST00000375692 CCDC17Q96LX7 622 aa15.13■□□□□ 0.01
CLCNKA-202ENST00000375692 PWWP2AQ96N64 755 aa15.13■□□□□ 0.01
CLCNKA-202ENST00000375692 STMN4Q9H169 189 aaPredicted RBP15.13■□□□□ 0.01
CLCNKA-202ENST00000375692 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.13■□□□□ 0.01
CLCNKA-202ENST00000375692 CLDN3O15551 220 aa15.12■□□□□ 0.01
CLCNKA-202ENST00000375692 NDUFB10O96000 172 aa15.12■□□□□ 0.01
CLCNKA-202ENST00000375692 GH2P01242 217 aa15.12■□□□□ 0.01
CLCNKA-202ENST00000375692 MMP14P50281 582 aa15.12■□□□□ 0.01
CLCNKA-202ENST00000375692 ZNF268Q14587 947 aaPredicted RBP15.12■□□□□ 0.01
CLCNKA-202ENST00000375692 SYDE2Q5VT97 1194 aa15.12■□□□□ 0.01
CLCNKA-202ENST00000375692 EP400NLQ6ZTU2 488 aa15.12■□□□□ 0.01
CLCNKA-202ENST00000375692 SEPT14Q6ZU15 432 aa15.12■□□□□ 0.01
CLCNKA-202ENST00000375692 NOP9Q86U38 636 aaKnown RBP15.12■□□□□ 0.01
CLCNKA-202ENST00000375692 RPS6KC1Q96S38 1066 aa15.12■□□□□ 0.01
CLCNKA-202ENST00000375692 HOMER3Q9NSC5 361 aa15.12■□□□□ 0.01
CLCNKA-202ENST00000375692 STK38LQ9Y2H1 464 aa15.12■□□□□ 0.01
CLCNKA-202ENST00000375692 STK24Q9Y6E0 443 aa15.12■□□□□ 0.01
CLCNKA-202ENST00000375692 PASKQ96RG2 1323 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms