RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 OR1G1P47890 313 aa13.46□□□□□ -0.25
LSM2-208ENST00000375661 AFF1P51825 1210 aaKnown RBP13.46□□□□□ -0.25
LSM2-208ENST00000375661 NUCB2P80303 420 aa13.46□□□□□ -0.25
LSM2-208ENST00000375661 CREMQ03060 361 aa13.46□□□□□ -0.25
LSM2-208ENST00000375661 DSC1Q08554 894 aa13.46□□□□□ -0.25
LSM2-208ENST00000375661 LAMTOR4Q0VGL1 99 aa13.46□□□□□ -0.25
LSM2-208ENST00000375661 EPHA7Q15375 998 aa13.46□□□□□ -0.25
LSM2-208ENST00000375661 FOXD4L6Q3SYB3 417 aaPredicted RBP13.46□□□□□ -0.25
LSM2-208ENST00000375661 FOXD4L3Q6VB84 417 aaPredicted RBP13.46□□□□□ -0.25
LSM2-208ENST00000375661 C4orf19Q8IY42 314 aa13.46□□□□□ -0.25
LSM2-208ENST00000375661 SMG8Q8ND04 991 aaKnown RBP13.46□□□□□ -0.25
LSM2-208ENST00000375661 RSAD2Q8WXG1 361 aa13.46□□□□□ -0.25
LSM2-208ENST00000375661 CHAMP1Q96JM3 812 aa13.46□□□□□ -0.25
LSM2-208ENST00000375661 CEP170P1Q96L14 293 aa13.46□□□□□ -0.25
LSM2-208ENST00000375661 IPO9Q96P70 1041 aaKnown RBP13.46□□□□□ -0.25
LSM2-208ENST00000375661 COLEC11Q9BWP8 271 aa13.46□□□□□ -0.25
LSM2-208ENST00000375661 NT5C3AQ9H0P0 336 aa13.46□□□□□ -0.25
LSM2-208ENST00000375661 MINDY3Q9H8M7 445 aa13.46□□□□□ -0.25
LSM2-208ENST00000375661 TBC1D17Q9HA65 648 aa13.46□□□□□ -0.25
LSM2-208ENST00000375661 SLC2A4RGQ9NR83 387 aa13.46□□□□□ -0.25
LSM2-208ENST00000375661 CHST7Q9NS84 486 aa13.46□□□□□ -0.25
LSM2-208ENST00000375661 FNIP2Q9P278 1114 aa13.46□□□□□ -0.25
LSM2-208ENST00000375661 TFIP11Q9UBB9 837 aaKnown RBP13.46□□□□□ -0.25
LSM2-208ENST00000375661 GVINP1Q7Z2Y8 2422 aa13.46□□□□□ -0.25
LSM2-208ENST00000375661 PATJQ8NI35 1801 aa13.46□□□□□ -0.26
LSM2-208ENST00000375661 ZMYM2Q9UBW7 1377 aa13.45□□□□□ -0.26
LSM2-208ENST00000375661 DCHS1Q96JQ0 3298 aa13.45□□□□□ -0.26
LSM2-208ENST00000375661 ARL5CA6NH57 179 aa13.45□□□□□ -0.26
LSM2-208ENST00000375661 POTEMA6NI47 508 aa13.45□□□□□ -0.26
LSM2-208ENST00000375661 ANHXE9PGG2 379 aa13.45□□□□□ -0.26
LSM2-208ENST00000375661 LAMP2P13473 410 aa13.45□□□□□ -0.26
LSM2-208ENST00000375661 PRPHP41219 470 aa13.45□□□□□ -0.26
LSM2-208ENST00000375661 NASPP49321 788 aaPredicted RBP13.45□□□□□ -0.26
LSM2-208ENST00000375661 FXR2P51116 673 aaKnown RBP eCLIP13.45□□□□□ -0.26
LSM2-208ENST00000375661 NPEPPSP55786 919 aa13.45□□□□□ -0.26
LSM2-208ENST00000375661 CEBPZQ03701 1054 aaKnown RBP13.45□□□□□ -0.26
LSM2-208ENST00000375661 POU5F1BQ06416 359 aa13.45□□□□□ -0.26
LSM2-208ENST00000375661 NCBP1Q09161 790 aaKnown RBP13.45□□□□□ -0.26
LSM2-208ENST00000375661 NCAPH2Q6IBW4 605 aa13.45□□□□□ -0.26
LSM2-208ENST00000375661 NOTUMQ6P988 496 aa13.45□□□□□ -0.26
LSM2-208ENST00000375661 OTUD6AQ7L8S5 288 aa13.45□□□□□ -0.26
LSM2-208ENST00000375661 IFNLR1Q8IU57 520 aaPredicted RBP13.45□□□□□ -0.26
LSM2-208ENST00000375661 HACE1Q8IYU2 909 aa13.45□□□□□ -0.26
LSM2-208ENST00000375661 TMEM143Q96AN5 459 aa13.45□□□□□ -0.26
LSM2-208ENST00000375661 ZNF707Q96C28 371 aaPredicted RBP13.45□□□□□ -0.26
LSM2-208ENST00000375661 ZNF396Q96N95 335 aaPredicted RBP13.45□□□□□ -0.26
LSM2-208ENST00000375661 MYADMQ96S97 322 aa13.45□□□□□ -0.26
LSM2-208ENST00000375661 PIDD1Q9HB75 910 aa13.45□□□□□ -0.26
LSM2-208ENST00000375661 ARHGEF3Q9NR81 526 aa13.45□□□□□ -0.26
LSM2-208ENST00000375661 CA14Q9ULX7 337 aa13.45□□□□□ -0.26
LSM2-208ENST00000375661 GIT1Q9Y2X7 761 aa13.45□□□□□ -0.26
LSM2-208ENST00000375661 PRG3Q9Y2Y8 225 aaPredicted RBP13.45□□□□□ -0.26
LSM2-208ENST00000375661 SIT1Q9Y3P8 196 aa13.45□□□□□ -0.26
LSM2-208ENST00000375661 IPPQ9Y573 584 aa13.45□□□□□ -0.26
LSM2-208ENST00000375661 BMP15O95972 392 aa13.44□□□□□ -0.26
LSM2-208ENST00000375661 DNM1Q05193 864 aaKnown RBP13.44□□□□□ -0.26
LSM2-208ENST00000375661 GRIN1Q05586 938 aa13.44□□□□□ -0.26
LSM2-208ENST00000375661 PDIA5Q14554 519 aa13.44□□□□□ -0.26
LSM2-208ENST00000375661 MXD4Q14582 209 aaPredicted RBP13.44□□□□□ -0.26
LSM2-208ENST00000375661 EMC2Q15006 297 aa13.44□□□□□ -0.26
LSM2-208ENST00000375661 SLC39A14Q15043 492 aa13.44□□□□□ -0.26
LSM2-208ENST00000375661 ARL6IP4Q66PJ3 421 aaKnown RBP13.44□□□□□ -0.26
LSM2-208ENST00000375661 DTHD1Q6ZMT9 781 aa13.44□□□□□ -0.26
LSM2-208ENST00000375661 TAS1R1Q7RTX1 841 aa13.44□□□□□ -0.26
LSM2-208ENST00000375661 C1orf210Q8IVY1 113 aa13.44□□□□□ -0.26
LSM2-208ENST00000375661 IGSF22Q8N9C0 903 aa13.44□□□□□ -0.26
LSM2-208ENST00000375661 RNF149Q8NC42 400 aa13.44□□□□□ -0.26
LSM2-208ENST00000375661 LINC00301Q8NCQ3 95 aa13.44□□□□□ -0.26
LSM2-208ENST00000375661 GPR152Q8TDT2 470 aa13.44□□□□□ -0.26
LSM2-208ENST00000375661 GAD1Q99259 594 aa13.44□□□□□ -0.26
LSM2-208ENST00000375661 HSD17B14Q9BPX1 270 aa13.44□□□□□ -0.26
LSM2-208ENST00000375661 PRKD2Q9BZL6 878 aa13.44□□□□□ -0.26
LSM2-208ENST00000375661 RGL1Q9NZL6 768 aa13.44□□□□□ -0.26
LSM2-208ENST00000375661 DLGAP2Q9P1A6 1054 aa13.44□□□□□ -0.26
LSM2-208ENST00000375661 CIZ1Q9ULV3 898 aaPredicted RBP13.44□□□□□ -0.26
LSM2-208ENST00000375661 MORC2Q9Y6X9 1032 aaPredicted RBP13.44□□□□□ -0.26
LSM2-208ENST00000375661 CACNA1AO00555 2505 aa13.43□□□□□ -0.26
LSM2-208ENST00000375661 TGM5O43548 720 aa13.43□□□□□ -0.26
LSM2-208ENST00000375661 RFPL2O75678 378 aa13.43□□□□□ -0.26
LSM2-208ENST00000375661 SLITRK3O94933 977 aa13.43□□□□□ -0.26
LSM2-208ENST00000375661 SP9P0CG40 484 aa13.43□□□□□ -0.26
LSM2-208ENST00000375661 YWHABP31946 246 aaKnown RBP13.43□□□□□ -0.26
LSM2-208ENST00000375661 MLH1P40692 756 aa13.43□□□□□ -0.26
LSM2-208ENST00000375661 PTENP60484 403 aa13.43□□□□□ -0.26
LSM2-208ENST00000375661 HTR4Q13639 388 aa13.43□□□□□ -0.26
LSM2-208ENST00000375661 PUM1Q14671 1186 aaKnown RBP eCLIP13.43□□□□□ -0.26
LSM2-208ENST00000375661 USP41Q3LFD5 358 aa13.43□□□□□ -0.26
LSM2-208ENST00000375661 ATL3Q6DD88 541 aa13.43□□□□□ -0.26
LSM2-208ENST00000375661 FUT10Q6P4F1 479 aa13.43□□□□□ -0.26
LSM2-208ENST00000375661 LILRA6Q6PI73 481 aa13.43□□□□□ -0.26
LSM2-208ENST00000375661 DCLRE1AQ6PJP8 1040 aa13.43□□□□□ -0.26
LSM2-208ENST00000375661 DGLUCYQ7Z3D6 616 aa13.43□□□□□ -0.26
LSM2-208ENST00000375661 ZNF579Q8NAF0 562 aaKnown RBP13.43□□□□□ -0.26
LSM2-208ENST00000375661 RUBCNQ92622 972 aa13.43□□□□□ -0.26
LSM2-208ENST00000375661 RMDN1Q96DB5 314 aa13.43□□□□□ -0.26
LSM2-208ENST00000375661 DYDC2Q96IM9 177 aa13.43□□□□□ -0.26
LSM2-208ENST00000375661 SHDQ96IW2 340 aa13.43□□□□□ -0.26
LSM2-208ENST00000375661 MTRQ99707 1265 aa13.43□□□□□ -0.26
LSM2-208ENST00000375661 EIF2AK1Q9BQI3 630 aaKnown RBP13.43□□□□□ -0.26
LSM2-208ENST00000375661 EIF2AQ9BY44 585 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms