RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 COASYQ13057 564 aa9.69□□□□□ -0.86
UBR4-201ENST00000375218 TTBK2Q6IQ55 1244 aa9.69□□□□□ -0.86
UBR4-201ENST00000375218 SASS6Q6UVJ0 657 aa9.69□□□□□ -0.86
UBR4-201ENST00000375218 PLBD2Q8NHP8 589 aa9.69□□□□□ -0.86
UBR4-201ENST00000375218 AK8Q96MA6 479 aa9.69□□□□□ -0.86
UBR4-201ENST00000375218 PHF20Q9BVI0 1012 aa9.69□□□□□ -0.86
UBR4-201ENST00000375218 MXD3Q9BW11 206 aa9.69□□□□□ -0.86
UBR4-201ENST00000375218 KRT23Q9C075 422 aa9.69□□□□□ -0.86
UBR4-201ENST00000375218 VPS11Q9H270 941 aa9.69□□□□□ -0.86
UBR4-201ENST00000375218 PRKAG3Q9UGI9 489 aa9.69□□□□□ -0.86
UBR4-201ENST00000375218 SRP68Q9UHB9 627 aaKnown RBP9.69□□□□□ -0.86
UBR4-201ENST00000375218 ADGRE2Q9UHX3 823 aa9.69□□□□□ -0.86
UBR4-201ENST00000375218 COG5Q9UP83 839 aa9.69□□□□□ -0.86
UBR4-201ENST00000375218 CAPN9O14815 690 aa9.69□□□□□ -0.86
UBR4-201ENST00000375218 GJB3O75712 270 aa9.69□□□□□ -0.86
UBR4-201ENST00000375218 TARSP26639 723 aaKnown RBP9.69□□□□□ -0.86
UBR4-201ENST00000375218 ATXN1P54253 815 aaKnown RBP9.69□□□□□ -0.86
UBR4-201ENST00000375218 FOXO4P98177 505 aa9.69□□□□□ -0.86
UBR4-201ENST00000375218 ORC1Q13415 861 aa9.69□□□□□ -0.86
UBR4-201ENST00000375218 CUL4BQ13620 913 aa9.69□□□□□ -0.86
UBR4-201ENST00000375218 TEAD4Q15561 434 aa9.69□□□□□ -0.86
UBR4-201ENST00000375218 AADACL4Q5VUY2 407 aa9.69□□□□□ -0.86
UBR4-201ENST00000375218 B3GNT6Q6ZMB0 384 aa9.69□□□□□ -0.86
UBR4-201ENST00000375218 GPR155Q7Z3F1 870 aa9.69□□□□□ -0.86
UBR4-201ENST00000375218 NT5C1BQ96P26 610 aa9.69□□□□□ -0.86
UBR4-201ENST00000375218 ADNPQ9H2P0 1102 aa9.69□□□□□ -0.86
UBR4-201ENST00000375218 PTPRCP08575 1304 aa9.69□□□□□ -0.86
UBR4-201ENST00000375218 FOXO6A8MYZ6 492 aa9.69□□□□□ -0.86
UBR4-201ENST00000375218 SLITRK5O94991 958 aa9.69□□□□□ -0.86
UBR4-201ENST00000375218 A1BGP04217 495 aa9.69□□□□□ -0.86
UBR4-201ENST00000375218 DRG2P55039 364 aaKnown RBP9.69□□□□□ -0.86
UBR4-201ENST00000375218 CSNK2BP67870 215 aa9.69□□□□□ -0.86
UBR4-201ENST00000375218 NFE2L1Q14494 772 aa9.69□□□□□ -0.86
UBR4-201ENST00000375218 ZNF267Q14586 743 aaPredicted RBP9.69□□□□□ -0.86
UBR4-201ENST00000375218 C1orf141Q5JVX7 400 aa9.69□□□□□ -0.86
UBR4-201ENST00000375218 INTS5Q6P9B9 1019 aaKnown RBP9.69□□□□□ -0.86
UBR4-201ENST00000375218 FBXO30Q8TB52 745 aa9.69□□□□□ -0.86
UBR4-201ENST00000375218 TCP11Q8WWU5 503 aa9.69□□□□□ -0.86
UBR4-201ENST00000375218 BABAM1Q9NWV8 329 aa9.69□□□□□ -0.86
UBR4-201ENST00000375218 CPSF3Q9UKF6 684 aaKnown RBP9.69□□□□□ -0.86
UBR4-201ENST00000375218 TMEM5Q9Y2B1 443 aa9.69□□□□□ -0.86
UBR4-201ENST00000375218 EME2A4GXA9 379 aaPredicted RBP9.68□□□□□ -0.86
UBR4-201ENST00000375218 NVLO15381 856 aaKnown RBP9.68□□□□□ -0.86
UBR4-201ENST00000375218 DDAH1O94760 285 aa9.68□□□□□ -0.86
UBR4-201ENST00000375218 MICAL2O94851 1124 aa9.68□□□□□ -0.86
UBR4-201ENST00000375218 ZKSCAN1P17029 563 aaPredicted RBP9.68□□□□□ -0.86
UBR4-201ENST00000375218 RPS6KB1P23443 525 aa9.68□□□□□ -0.86
UBR4-201ENST00000375218 SOX6P35712 828 aa9.68□□□□□ -0.86
UBR4-201ENST00000375218 GPR85P60893 370 aa9.68□□□□□ -0.86
UBR4-201ENST00000375218 DSTNP60981 165 aa9.68□□□□□ -0.86
UBR4-201ENST00000375218 ZNF252P-AS1Q0IIN9 211 aa9.68□□□□□ -0.86
UBR4-201ENST00000375218 C1orf216Q8TAB5 229 aa9.68□□□□□ -0.86
UBR4-201ENST00000375218 THAP3Q8WTV1 239 aaPredicted RBP9.68□□□□□ -0.86
UBR4-201ENST00000375218 BCL7CQ8WUZ0 217 aaPredicted RBP9.68□□□□□ -0.86
UBR4-201ENST00000375218 DYDC1Q8WWB3 177 aa9.68□□□□□ -0.86
UBR4-201ENST00000375218 LLPHQ9BRT6 129 aaKnown RBP9.68□□□□□ -0.86
UBR4-201ENST00000375218 KRT84Q9NSB2 600 aa9.68□□□□□ -0.86
UBR4-201ENST00000375218 EPS15L1Q9UBC2 864 aa9.68□□□□□ -0.86
UBR4-201ENST00000375218 RIC1Q4ADV7 1423 aa9.68□□□□□ -0.86
UBR4-201ENST00000375218 LRRC37AA6NMS7 1700 aa9.68□□□□□ -0.86
UBR4-201ENST00000375218 SPTBN5Q9NRC6 3674 aaKnown RBP9.68□□□□□ -0.86
UBR4-201ENST00000375218 GSG1L2A8MUP6 293 aa9.68□□□□□ -0.86
UBR4-201ENST00000375218 PLCG2P16885 1265 aa9.68□□□□□ -0.86
UBR4-201ENST00000375218 L1CAMP32004 1257 aa9.68□□□□□ -0.86
UBR4-201ENST00000375218 ETV1P50549 477 aa9.68□□□□□ -0.86
UBR4-201ENST00000375218 FXR2P51116 673 aaKnown RBP eCLIP9.68□□□□□ -0.863e-9■■■□□ 17.4
UBR4-201ENST00000375218 PLCD1P51178 756 aa9.68□□□□□ -0.86
UBR4-201ENST00000375218 HLFQ16534 295 aa9.68□□□□□ -0.86
UBR4-201ENST00000375218 FCHSD1Q86WN1 690 aa9.68□□□□□ -0.86
UBR4-201ENST00000375218 FAM81AQ8TBF8 368 aa9.68□□□□□ -0.86
UBR4-201ENST00000375218 TRIM47Q96LD4 638 aa9.68□□□□□ -0.86
UBR4-201ENST00000375218 RBM42Q9BTD8 480 aaKnown RBP9.68□□□□□ -0.86
UBR4-201ENST00000375218 DHRS4Q9BTZ2 278 aa9.68□□□□□ -0.86
UBR4-201ENST00000375218 API5Q9BZZ5 524 aaKnown RBP9.68□□□□□ -0.86
UBR4-201ENST00000375218 RTEL1Q9NZ71 1219 aa9.68□□□□□ -0.86
UBR4-201ENST00000375218 UBP1Q9NZI7 540 aa9.68□□□□□ -0.86
UBR4-201ENST00000375218 MYH15Q9Y2K3 1946 aa9.68□□□□□ -0.86
UBR4-201ENST00000375218 PQBP1O60828 265 aaKnown RBP9.68□□□□□ -0.86
UBR4-201ENST00000375218 OR1G1P47890 313 aa9.68□□□□□ -0.86
UBR4-201ENST00000375218 DIXDC1Q155Q3 683 aa9.68□□□□□ -0.86
UBR4-201ENST00000375218 USP39Q53GS9 565 aaKnown RBP9.68□□□□□ -0.86
UBR4-201ENST00000375218 SLC27A3Q5K4L6 730 aa9.68□□□□□ -0.86
UBR4-201ENST00000375218 MENTQ9BUN1 341 aa9.68□□□□□ -0.86
UBR4-201ENST00000375218 SNX6Q9UNH7 406 aa9.68□□□□□ -0.86
UBR4-201ENST00000375218 GOLGA6L10A6NI86 522 aa9.67□□□□□ -0.86
UBR4-201ENST00000375218 A6NLC8 198 aa9.67□□□□□ -0.86
UBR4-201ENST00000375218 C16orf96A6NNT2 1141 aa9.67□□□□□ -0.86
UBR4-201ENST00000375218 HDAC3O15379 428 aa9.67□□□□□ -0.86
UBR4-201ENST00000375218 TROVE2P10155 538 aaKnown RBP eCLIP9.67□□□□□ -0.86
UBR4-201ENST00000375218 SFPQP23246 707 aaKnown RBP eCLIP9.67□□□□□ -0.86
UBR4-201ENST00000375218 TGFB2P61812 414 aa9.67□□□□□ -0.86
UBR4-201ENST00000375218 GRIK3Q13003 919 aa9.67□□□□□ -0.86
UBR4-201ENST00000375218 NR5A1Q13285 461 aa9.67□□□□□ -0.86
UBR4-201ENST00000375218 OR8H3Q8N146 312 aa9.67□□□□□ -0.86
UBR4-201ENST00000375218 ATP6V0A1Q93050 837 aa9.67□□□□□ -0.86
UBR4-201ENST00000375218 PRICKLE1Q96MT3 831 aaPredicted RBP9.67□□□□□ -0.86
UBR4-201ENST00000375218 CCDC177Q9NQR7 707 aaPredicted RBP9.67□□□□□ -0.86
UBR4-201ENST00000375218 FKBP14Q9NWM8 211 aa9.67□□□□□ -0.86
UBR4-201ENST00000375218 CLEC4AQ9UMR7 237 aa9.67□□□□□ -0.86
UBR4-201ENST00000375218 C15orf41Q9Y2V0 281 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms