RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 MAP2K5Q13163 448 aa13.05□□□□□ -0.32
HMGCL-202ENST00000374487 EPC2Q52LR7 807 aa13.05□□□□□ -0.32
HMGCL-202ENST00000374487 C1orf220Q5T0J3 134 aa13.05□□□□□ -0.32
HMGCL-202ENST00000374487 EMBQ6PCB8 327 aa13.05□□□□□ -0.32
HMGCL-202ENST00000374487 SLFN11Q7Z7L1 901 aa13.05□□□□□ -0.32
HMGCL-202ENST00000374487 USP37Q86T82 979 aa13.05□□□□□ -0.32
HMGCL-202ENST00000374487 ARHGEF19Q8IW93 802 aa13.05□□□□□ -0.32
HMGCL-202ENST00000374487 GOLGA6L1Q8N7Z2 621 aa13.05□□□□□ -0.32
HMGCL-202ENST00000374487 MCPH1Q8NEM0 835 aa13.05□□□□□ -0.32
HMGCL-202ENST00000374487 SPIRE2Q8WWL2 714 aa13.05□□□□□ -0.32
HMGCL-202ENST00000374487 IFT81Q8WYA0 676 aa13.05□□□□□ -0.32
HMGCL-202ENST00000374487 POMGNT1Q8WZA1 660 aa13.05□□□□□ -0.32
HMGCL-202ENST00000374487 EXOC4Q96A65 974 aa13.05□□□□□ -0.32
HMGCL-202ENST00000374487 NTPCRQ9BSD7 190 aaKnown RBP13.05□□□□□ -0.32
HMGCL-202ENST00000374487 TMEM117Q9H0C3 514 aa13.05□□□□□ -0.32
HMGCL-202ENST00000374487 EPB41L5Q9HCM4 733 aa13.05□□□□□ -0.32
HMGCL-202ENST00000374487 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.05□□□□□ -0.32
HMGCL-202ENST00000374487 SUCLA2Q9P2R7 463 aaPredicted RBP13.05□□□□□ -0.32
HMGCL-202ENST00000374487 AMFRQ9UKV5 643 aa13.05□□□□□ -0.32
HMGCL-202ENST00000374487 IVNS1ABPQ9Y6Y0 642 aa13.05□□□□□ -0.32
HMGCL-202ENST00000374487 FAM170AA1A519 330 aa13.04□□□□□ -0.32
HMGCL-202ENST00000374487 GOLGA6BA6NDN3 693 aa13.04□□□□□ -0.32
HMGCL-202ENST00000374487 EN2P19622 333 aaPredicted RBP13.04□□□□□ -0.32
HMGCL-202ENST00000374487 ACTR2P61160 394 aa13.04□□□□□ -0.32
HMGCL-202ENST00000374487 IRF5Q13568 498 aa13.04□□□□□ -0.32
HMGCL-202ENST00000374487 PRAMEF19Q5SWL8 479 aa13.04□□□□□ -0.32
HMGCL-202ENST00000374487 MIS18BP1Q6P0N0 1132 aa13.04□□□□□ -0.32
HMGCL-202ENST00000374487 KLHL7Q8IXQ5 586 aa13.04□□□□□ -0.32
HMGCL-202ENST00000374487 PPM1KQ8N3J5 372 aa13.04□□□□□ -0.32
HMGCL-202ENST00000374487 METTL13Q8N6R0 699 aa13.04□□□□□ -0.32
HMGCL-202ENST00000374487 PLEKHO2Q8TD55 490 aa13.04□□□□□ -0.32
HMGCL-202ENST00000374487 ACTRT1Q8TDG2 376 aa13.04□□□□□ -0.32
HMGCL-202ENST00000374487 BICD1Q96G01 975 aa13.04□□□□□ -0.32
HMGCL-202ENST00000374487 IFT74Q96LB3 600 aa13.04□□□□□ -0.32
HMGCL-202ENST00000374487 SYT11Q9BT88 431 aa13.04□□□□□ -0.32
HMGCL-202ENST00000374487 PLEKHA4Q9H4M7 779 aa13.04□□□□□ -0.32
HMGCL-202ENST00000374487 OSGEPQ9NPF4 335 aa13.04□□□□□ -0.32
HMGCL-202ENST00000374487 NFASCO94856 1347 aa13.04□□□□□ -0.32
HMGCL-202ENST00000374487 ANKRD62A6NC57 917 aa13.04□□□□□ -0.32
HMGCL-202ENST00000374487 SLC15A5A6NIM6 579 aa13.04□□□□□ -0.32
HMGCL-202ENST00000374487 SPATA31C2B4DYI2 1134 aa13.04□□□□□ -0.32
HMGCL-202ENST00000374487 PGRMC1O00264 195 aaKnown RBP13.04□□□□□ -0.32
HMGCL-202ENST00000374487 HNRNPDLO14979 420 aaKnown RBP13.04□□□□□ -0.32
HMGCL-202ENST00000374487 ADRB2P07550 413 aa13.04□□□□□ -0.32
HMGCL-202ENST00000374487 GLI1P08151 1106 aa13.04□□□□□ -0.32
HMGCL-202ENST00000374487 GGCXP38435 758 aa13.04□□□□□ -0.32
HMGCL-202ENST00000374487 PRKCEQ02156 737 aa13.04□□□□□ -0.32
HMGCL-202ENST00000374487 STXBP2Q15833 593 aa13.04□□□□□ -0.32
HMGCL-202ENST00000374487 KRT39Q6A163 491 aa13.04□□□□□ -0.32
HMGCL-202ENST00000374487 DPP9Q86TI2 863 aa13.04□□□□□ -0.32
HMGCL-202ENST00000374487 NT5DC3Q86UY8 548 aa13.04□□□□□ -0.32
HMGCL-202ENST00000374487 ANKRD35Q8N283 1001 aa13.04□□□□□ -0.32
HMGCL-202ENST00000374487 SHCBP1Q8NEM2 672 aa13.04□□□□□ -0.32
HMGCL-202ENST00000374487 MMP19Q99542 508 aa13.04□□□□□ -0.32
HMGCL-202ENST00000374487 THAP2Q9H0W7 228 aa13.04□□□□□ -0.32
HMGCL-202ENST00000374487 MROH8Q9H579 483 aa13.04□□□□□ -0.32
HMGCL-202ENST00000374487 CYP26B1Q9NR63 512 aa13.04□□□□□ -0.32
HMGCL-202ENST00000374487 PMM2O15305 246 aa13.03□□□□□ -0.32
HMGCL-202ENST00000374487 BUB1BO60566 1050 aaPredicted RBP13.03□□□□□ -0.32
HMGCL-202ENST00000374487 RNF40O75150 1001 aa13.03□□□□□ -0.32
HMGCL-202ENST00000374487 CCL5P13501 91 aa13.03□□□□□ -0.32
HMGCL-202ENST00000374487 TNFRSF8P28908 595 aa13.03□□□□□ -0.32
HMGCL-202ENST00000374487 RGS2P41220 211 aa13.03□□□□□ -0.32
HMGCL-202ENST00000374487 LMAN1P49257 510 aa13.03□□□□□ -0.32
HMGCL-202ENST00000374487 MFAP3P55082 362 aa13.03□□□□□ -0.32
HMGCL-202ENST00000374487 PRMT2P55345 433 aa13.03□□□□□ -0.32
HMGCL-202ENST00000374487 CNTN2Q02246 1040 aa13.03□□□□□ -0.32
HMGCL-202ENST00000374487 PAK2Q13177 524 aa13.03□□□□□ -0.32
HMGCL-202ENST00000374487 ABHD15Q6UXT9 468 aa13.03□□□□□ -0.32
HMGCL-202ENST00000374487 CCDC60Q8IWA6 550 aaPredicted RBP13.03□□□□□ -0.32
HMGCL-202ENST00000374487 OLIG1Q8TAK6 271 aa13.03□□□□□ -0.32
HMGCL-202ENST00000374487 PARD3BQ8TEW8 1205 aa13.03□□□□□ -0.32
HMGCL-202ENST00000374487 SLC20A1Q8WUM9 679 aa13.03□□□□□ -0.32
HMGCL-202ENST00000374487 BSNDQ8WZ55 320 aa13.03□□□□□ -0.32
HMGCL-202ENST00000374487 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.03□□□□□ -0.32
HMGCL-202ENST00000374487 ATP6V0A4Q9HBG4 840 aa13.03□□□□□ -0.32
HMGCL-202ENST00000374487 TAS2R14Q9NYV8 317 aa13.03□□□□□ -0.32
HMGCL-202ENST00000374487 KRIT1O00522 736 aa13.03□□□□□ -0.32
HMGCL-202ENST00000374487 SYF2O95926 243 aaKnown RBP13.03□□□□□ -0.32
HMGCL-202ENST00000374487 CCND3P30281 292 aaPredicted RBP13.03□□□□□ -0.32
HMGCL-202ENST00000374487 CACNB2Q08289 660 aaPredicted RBP13.03□□□□□ -0.32
HMGCL-202ENST00000374487 XKR3Q5GH77 459 aa13.03□□□□□ -0.32
HMGCL-202ENST00000374487 RPUSD2Q8IZ73 545 aaKnown RBP13.03□□□□□ -0.32
HMGCL-202ENST00000374487 SLAIN1Q8ND83 568 aa13.03□□□□□ -0.32
HMGCL-202ENST00000374487 POP1Q99575 1024 aaKnown RBP13.03□□□□□ -0.32
HMGCL-202ENST00000374487 AP1M1Q9BXS5 423 aa13.03□□□□□ -0.32
HMGCL-202ENST00000374487 GDF3Q9NR23 364 aa13.03□□□□□ -0.32
HMGCL-202ENST00000374487 NFU1Q9UMS0 254 aa13.03□□□□□ -0.32
HMGCL-202ENST00000374487 STXBP5LQ9Y2K9 1186 aa13.03□□□□□ -0.32
HMGCL-202ENST00000374487 NOC2LQ9Y3T9 749 aaKnown RBP13.03□□□□□ -0.32
HMGCL-202ENST00000374487 TELO2Q9Y4R8 837 aa13.03□□□□□ -0.32
HMGCL-202ENST00000374487 NCANO14594 1321 aa13.02□□□□□ -0.32
HMGCL-202ENST00000374487 IGSF9BQ9UPX0 1349 aa13.02□□□□□ -0.32
HMGCL-202ENST00000374487 ESYT3A0FGR9 886 aa13.02□□□□□ -0.33
HMGCL-202ENST00000374487 H0YCG3 227 aa13.02□□□□□ -0.33
HMGCL-202ENST00000374487 STBD1O95210 358 aa13.02□□□□□ -0.33
HMGCL-202ENST00000374487 SLC25A27O95847 323 aa13.02□□□□□ -0.33
HMGCL-202ENST00000374487 FTLP02792 175 aaPredicted RBP13.02□□□□□ -0.33
HMGCL-202ENST00000374487 DLATP10515 647 aaKnown RBP13.02□□□□□ -0.33
HMGCL-202ENST00000374487 CARSP49589 748 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms