RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 STAP1Q9ULZ2 295 aa11.27□□□□□ -0.61
PGK1-201ENST00000373316 PCDHA10Q9Y5I2 948 aa11.27□□□□□ -0.61
PGK1-201ENST00000373316 MAD1L1Q9Y6D9 718 aa11.27□□□□□ -0.61
PGK1-201ENST00000373316 ASTN2O75129 1339 aaPredicted RBP11.26□□□□□ -0.61
PGK1-201ENST00000373316 POTEMA6NI47 508 aa11.26□□□□□ -0.61
PGK1-201ENST00000373316 F5H6K3 240 aa11.26□□□□□ -0.61
PGK1-201ENST00000373316 COPEO14579 308 aa11.26□□□□□ -0.61
PGK1-201ENST00000373316 LRRN2O75325 713 aa11.26□□□□□ -0.61
PGK1-201ENST00000373316 AKR1B1P15121 316 aa11.26□□□□□ -0.61
PGK1-201ENST00000373316 KLRC3Q07444 240 aa11.26□□□□□ -0.61
PGK1-201ENST00000373316 ST13P4Q8IZP2 240 aaPredicted RBP11.26□□□□□ -0.61
PGK1-201ENST00000373316 TEX9Q8N6V9 391 aa11.26□□□□□ -0.61
PGK1-201ENST00000373316 RBM46Q8TBY0 533 aaKnown RBP11.26□□□□□ -0.61
PGK1-201ENST00000373316 KIFC3Q9BVG8 833 aa11.26□□□□□ -0.61
PGK1-201ENST00000373316 MAF1Q9H063 256 aa11.26□□□□□ -0.61
PGK1-201ENST00000373316 LRRC4Q9HBW1 653 aa11.26□□□□□ -0.61
PGK1-201ENST00000373316 SERPINA10Q9UK55 444 aa11.26□□□□□ -0.61
PGK1-201ENST00000373316 HPCAL4Q9UM19 191 aa11.26□□□□□ -0.61
PGK1-201ENST00000373316 E9PMD0 336 aa11.26□□□□□ -0.61
PGK1-201ENST00000373316 MEFVO15553 781 aaPredicted RBP11.26□□□□□ -0.61
PGK1-201ENST00000373316 ATP1A1P05023 1023 aaKnown RBP11.26□□□□□ -0.61
PGK1-201ENST00000373316 PAPOLAP51003 745 aaKnown RBP11.26□□□□□ -0.61
PGK1-201ENST00000373316 FKBP1AP62942 108 aaKnown RBP11.26□□□□□ -0.61
PGK1-201ENST00000373316 THOC5Q13769 683 aaKnown RBP11.26□□□□□ -0.61
PGK1-201ENST00000373316 PDCD7Q8N8D1 485 aaKnown RBP11.26□□□□□ -0.61
PGK1-201ENST00000373316 BEST2Q8NFU1 509 aa11.26□□□□□ -0.61
PGK1-201ENST00000373316 ACAD9Q9H845 621 aa11.26□□□□□ -0.61
PGK1-201ENST00000373316 ZNF302Q9NR11 478 aa11.26□□□□□ -0.61
PGK1-201ENST00000373316 ARL2BPQ9Y2Y0 163 aa11.26□□□□□ -0.61
PGK1-201ENST00000373316 CLDN3O15551 220 aa11.26□□□□□ -0.61
PGK1-201ENST00000373316 LPXNO60711 386 aa11.26□□□□□ -0.61
PGK1-201ENST00000373316 CDH16O75309 829 aa11.26□□□□□ -0.61
PGK1-201ENST00000373316 ATP5BP06576 529 aaKnown RBP11.26□□□□□ -0.61
PGK1-201ENST00000373316 RASA1P20936 1047 aa11.26□□□□□ -0.61
PGK1-201ENST00000373316 PEX3P56589 373 aa11.26□□□□□ -0.61
PGK1-201ENST00000373316 DYNC1I2Q13409 638 aaKnown RBP11.26□□□□□ -0.61
PGK1-201ENST00000373316 GADL1Q6ZQY3 521 aa11.26□□□□□ -0.61
PGK1-201ENST00000373316 NME8Q8N427 588 aa11.26□□□□□ -0.61
PGK1-201ENST00000373316 PSPC1Q8WXF1 523 aaKnown RBP11.26□□□□□ -0.61
PGK1-201ENST00000373316 OLFM3Q96PB7 478 aa11.26□□□□□ -0.61
PGK1-201ENST00000373316 USP17L10C9JJH3 530 aa11.26□□□□□ -0.61
PGK1-201ENST00000373316 CHEK2O96017 543 aa11.26□□□□□ -0.61
PGK1-201ENST00000373316 GH2P01242 217 aa11.26□□□□□ -0.61
PGK1-201ENST00000373316 KAZNQ674X7 775 aa11.26□□□□□ -0.61
PGK1-201ENST00000373316 SIX6OS1Q8N1H7 587 aa11.26□□□□□ -0.61
PGK1-201ENST00000373316 DEPDC1BQ8WUY9 529 aa11.26□□□□□ -0.61
PGK1-201ENST00000373316 CCDC124Q96CT7 223 aaKnown RBP11.26□□□□□ -0.61
PGK1-201ENST00000373316 ZNF560Q96MR9 790 aa11.26□□□□□ -0.61
PGK1-201ENST00000373316 NACA2Q9H009 215 aa11.26□□□□□ -0.61
PGK1-201ENST00000373316 SUGCTQ9HAC7 445 aa11.26□□□□□ -0.61
PGK1-201ENST00000373316 USP27XA6NNY8 438 aa11.25□□□□□ -0.61
PGK1-201ENST00000373316 MEIS1O00470 390 aa11.25□□□□□ -0.61
PGK1-201ENST00000373316 FMO5P49326 533 aa11.25□□□□□ -0.61
PGK1-201ENST00000373316 PPP2R5CQ13362 524 aa11.25□□□□□ -0.61
PGK1-201ENST00000373316 MXD4Q14582 209 aaPredicted RBP11.25□□□□□ -0.61
PGK1-201ENST00000373316 SLC35G1Q2M3R5 365 aa11.25□□□□□ -0.61
PGK1-201ENST00000373316 XKR3Q5GH77 459 aa11.25□□□□□ -0.61
PGK1-201ENST00000373316 NAA35Q5VZE5 725 aa11.25□□□□□ -0.61
PGK1-201ENST00000373316 CCDC137Q6PK04 289 aaKnown RBP11.25□□□□□ -0.61
PGK1-201ENST00000373316 KDM7AQ6ZMT4 941 aa11.25□□□□□ -0.61
PGK1-201ENST00000373316 REXO1L1PQ8IX06 675 aa11.25□□□□□ -0.61
PGK1-201ENST00000373316 C7orf43Q8WVR3 580 aa11.25□□□□□ -0.61
PGK1-201ENST00000373316 TRIM4Q9C037 500 aa11.25□□□□□ -0.61
PGK1-201ENST00000373316 UPF3AQ9H1J1 476 aaKnown RBP11.25□□□□□ -0.61
PGK1-201ENST00000373316 PRDM16Q9HAZ2 1276 aa11.25□□□□□ -0.61
PGK1-201ENST00000373316 KBTBD4Q9NVX7 518 aa11.25□□□□□ -0.61
PGK1-201ENST00000373316 POTEB3A0JP26 581 aa11.25□□□□□ -0.61
PGK1-201ENST00000373316 ASB14A6NK59 587 aa11.25□□□□□ -0.61
PGK1-201ENST00000373316 POTECB2RU33 542 aa11.25□□□□□ -0.61
PGK1-201ENST00000373316 INO80B-WBP1J3KQ70 363 aa11.25□□□□□ -0.61
PGK1-201ENST00000373316 TOMM70O94826 608 aa11.25□□□□□ -0.61
PGK1-201ENST00000373316 GCKP35557 465 aa11.25□□□□□ -0.61
PGK1-201ENST00000373316 FMR1Q06787 632 aaKnown RBP eCLIP11.25□□□□□ -0.612e-13■■□□□ 14.2
PGK1-201ENST00000373316 POTEBQ6S5H4 581 aa11.25□□□□□ -0.61
PGK1-201ENST00000373316 CAVIN3Q969G5 261 aa11.25□□□□□ -0.61
PGK1-201ENST00000373316 FAM193BQ96PV7 902 aaPredicted RBP11.25□□□□□ -0.61
PGK1-201ENST00000373316 NUDCD1Q96RS6 583 aa11.25□□□□□ -0.61
PGK1-201ENST00000373316 VPS33BQ9H267 617 aa11.25□□□□□ -0.61
PGK1-201ENST00000373316 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.25□□□□□ -0.61
PGK1-201ENST00000373316 FTLP02792 175 aaPredicted RBP11.25□□□□□ -0.61
PGK1-201ENST00000373316 RPLP2P05387 115 aaKnown RBP11.25□□□□□ -0.61
PGK1-201ENST00000373316 KRT16P08779 473 aa11.25□□□□□ -0.61
PGK1-201ENST00000373316 TROAPQ12815 778 aa11.25□□□□□ -0.61
PGK1-201ENST00000373316 DGKZQ13574 1117 aa11.25□□□□□ -0.61
PGK1-201ENST00000373316 ZNF699Q32M78 642 aa11.25□□□□□ -0.61
PGK1-201ENST00000373316 MMEL1Q495T6 779 aa11.25□□□□□ -0.61
PGK1-201ENST00000373316 Q4G0T1 1027 aa11.25□□□□□ -0.61
PGK1-201ENST00000373316 OR6B2Q6IFH4 312 aa11.25□□□□□ -0.61
PGK1-201ENST00000373316 MTHFD1LQ6UB35 978 aa11.25□□□□□ -0.61
PGK1-201ENST00000373316 MRRFQ96E11 262 aaKnown RBP11.25□□□□□ -0.61
PGK1-201ENST00000373316 NRBF2Q96F24 287 aa11.25□□□□□ -0.61
PGK1-201ENST00000373316 RNPC3Q96LT9 517 aaKnown RBP11.25□□□□□ -0.61
PGK1-201ENST00000373316 WDR24Q96S15 920 aa11.25□□□□□ -0.61
PGK1-201ENST00000373316 RMDN3Q96TC7 470 aa11.25□□□□□ -0.61
PGK1-201ENST00000373316 LXNQ9BS40 222 aa11.25□□□□□ -0.61
PGK1-201ENST00000373316 SAYSD1Q9NPB0 183 aa11.25□□□□□ -0.61
PGK1-201ENST00000373316 HACD3Q9P035 362 aa11.25□□□□□ -0.61
PGK1-201ENST00000373316 BAG5Q9UL15 447 aa11.25□□□□□ -0.61
PGK1-201ENST00000373316 CLGNO14967 610 aa11.25□□□□□ -0.61
PGK1-201ENST00000373316 GYPCP04921 128 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms